View Redoxidase 14234

Entry information : AtTrx09(AT4G32580/Picot2)

Entry ID	14234
Creation	2016-10-27 (Christophe Dunand)
Last sequence changes	2016-11-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-01-30 (Christophe Dunand)

Peroxidase information: AtTrx09(AT4G32580/Picot2)

Name

AtTrx09(AT4G32580/Picot2)

Class

Other Thioredoxin [Orthogroup: N/D] N/D

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtTrx09 start..stop	S start..stop
AtGrxS17	294	1.2e-99	1..155	1..161
ThasGrxS17-1	244	3.19e-80	1..154	1..164
ThasGrxS17-2	231	4.92e-75	1..155	1..161
HaGrxS01	204	6.02e-65	5..155	3..164

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14234' 'complement(join(15719878..15720114,15720216..15720290,15720365..15720535))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	15720365..15720535	169	N° 2	15720216..15720290	73	N° 3	15719878..15720114	235
complement(join(15719878..15720114,15720216..15720290,15720365..15720535))

Literature and cross-references AtTrx09(AT4G32580/Picot2)

Cluster/Prediction ref.	Genebank: 829393
Omic ref.	AtProteome: At4g32580 ATTED-II: At4g32580 e-FP Browser: At4g32580 ePlant: At4g32580 TAIR: At4g32580

Protein sequence: AtTrx09(AT4G32580/Picot2)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	160
PWM (Da):	17252.82
PI (pH):	6.35

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSGTVKDIVSKEELDNLRHSGAPLVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAGSITPASLGLAAGP
TILETVKKNAKASGQDRAQPVSTADALKNRLEKLTLLCYS*

Retrieve as FASTA

Remarks

Short homolog of PicotGRXS17 with only one TRX domain.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTGGTACTGTGAAGGATATCGTTTCAAAGGAGGAGCTTGATAACTTGCGCCACAGCGGAGCACCACTCGTGCTTCACTTCTGGGCTTCTTGGTGTGACGCTTCGAAGCAGATGGAT
CAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTTAGGGTTCGTCGTCTCTGTTCGAATTTTATCTCTTTCAATTGGTTTTTGACTTTGATTGGTTTTATTTATCTT
CTTAGGTGTAGAAGCTGAGGAACATCCTGAGATATCTGAGGCTTATTCTGTTGCTCTTGTGCCGTATTTCGTCTTCTTCAAGGTAAACTTTAGGCATATTGATTCTTTGTTTGGTTGCAA
TTTTTTGGCTTATTGACAAAGCTTGAATCTTTGTCACTGCACTGAATCCTTTTCTTATTGAAGGAGATGGCAAAACTGTGGATACACTTGAAGGGGCAGATCCATCAAGTTTAGCTAATA
AAGTTGGCAAAGTTGCTGGTTCTATTACTCCTGCAAGCTTAGGGTTGGCTGCAGGGCCAACGATTCTTGAAACTGTTAAGAAGAATGCGAAAGCTTCTGGACAAGACCGAGCTCAGCCTG
TATCTACCGCTGATGCTCTCAAGAATCGTTTGGAAAAACTCACCCTGTTATGTTATTCATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTGGTACTGTGAAGGATATCGTTTCAAAGGAGGAGCTTGATAACTTGCGCCACAGCGGAGCACCACTCGTGCTTCACTTCTGGGCTTCTTGGTGTGACGCTTCGAAGCAGATGGAT
CAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTTAGGGTAGAAGCTGAGGAACATCCTGAGATATCTGAGGCTTATTCTGTTGCTCTTGTGCCGTATTTCGTCTTC
TTCAAGGATGGCAAAACTGTGGATACACTTGAAGGGGCAGATCCATCAAGTTTAGCTAATAAAGTTGGCAAAGTTGCTGGTTCTATTACTCCTGCAAGCTTAGGGTTGGCTGCAGGGCCA
ACGATTCTTGAAACTGTTAAGAAGAATGCGAAAGCTTCTGGACAAGACCGAGCTCAGCCTGTATCTACCGCTGATGCTCTCAAGAATCGTTTGGAAAAACTCACCCTGTTATGTTATTCA
TGA

Retrieve as FASTA