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Entry information : HaClot01 (HanXRQChr01g0018511)
Entry ID 14241
Creation 2016-11-28 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaClot01 (HanXRQChr01g0018511)
Name (synonym) HaClot01 (HanXRQChr01g0018511)
Class Thioredoxin Type Clot    [Orthogroup: Clot001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaClot01
start..stop		 S start..stop
ThasClot01 173 2.69e-57 1..131 1..131
AtClot01 162 7.44e-53 1..119 1..120
PpaClot01 140 2.91e-44 1..131 1..129
CbraClot01 107 3.54e-30 4..130 103..228
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 109945488..109945632 143 N° 2 109944170..109944423 252  
complement(join(109944170..109944423,109945488..109945632))


exon

Literature and cross-references HaClot01 (HanXRQChr01g0018511)
DNA ref. HanXRQ genome:   HanXRQChr01 (109945632..109944170)
Protein sequence: HaClot01 (HanXRQChr01g0018511)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132
PWM (Da):   %s   14895.75 Transmb domain:   %s   i12-34o
PI (pH):   %s   7.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPLKTVDATLSTFNAVFEKFKSEAPNNKNNLILFLADNEPSTNRSWCPDCVRAEPVIYKKLESSGDDVALLRAYVGDRPTWRNPLHPWRVDSTFKLKGVPTLILWEKGEVKGRLEDHEAH
IEKKIDSLLATK

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTTGAAGACGGTTGACGCTACCTTATCGACCTTCAACGCCGTCTTCGAGAAATTCAAATCAGAAGCACCAAACAACAAGAACAATCTCATCTTGTTTTTGGCTGATAACGAACCT
TCCACTAATCGCAGTTGGTGCCCTGGTAATACCATTGCATATTCTCATTACTGATTTCAGTTTCCAACTTTAATTAATACTTGTTAATTTCAAACCTAGGGTTTTTCTTTCACTTGATTA
TTGCTGTAAACTTTAATGTAGTTCAGTCGTTGTAAGTTTAATTTGTTCTAAAAAGATGGAATTAAGTTTAAAACTTGTTTTATGATCTTTTTAAGAGAGTAAAATGGTGAATTTTTTTTT
CTGAAAGTTGTAGTGCTAGGAGAGGAATGTTACCCTAATTTTTTTTTTTTCTTCCAAATTTTGATGCATTTTCTGTTAAATTTAAGGTATAGTTGTCGAGTGTAGACTACTGTTGCATTA
ACAAAAATTTGGGGGAAAAATTGGATTTCTAGAAGAAGTAATTTGGACCCGACTTGTTGAAATTAGGGGTGTAAACAAGCCCAGAGGCTCGAGAGCTACTCGTTATCGTTATCGGCTCGG
TTAAAAGCTCGAACGAGTCGAGCTTCGACGAGCCAGAGCTCGAGCCTGTAATAGAGCTCGTTTTGTTATCGATCCCAAGTTCGAGTCTGAAATACAAGCCCAAACAAATTTTACATTTTA
TATATATAATATATAAAGTAACAATAATGATGATAACATTGGCGAGCCAAGCTTCGGCTCGTTTAAGCGATGTTGAAGCGAGCTCGAGCCGAGCTTTTAGTTTGTTTGAGGTTGTTCTCA
AAATAGCTCGAGTTTTGGGTTTAGCTTGCGAGCCGAGCTCGAGCTCAAATAAGTAGGCTTGAACTGAGCCGAGCTCTAGCTCAAGCTTTCATAAAAACACGATGAGCCGAGCTCGAGCCT
AGTTTGGCTCGGGCTCGGCCCGGCTCGTTTACACCTCTAGTTGAGATGTTTCGACAATATATTGTGGCCATGTAACTCCAAACAGCATGGAAGTTATGTATGTTTTAAGTTGGGTCATTT
TCTAGCCCACTTACTTTTATCGTGTTGGTCCAAATATGACTATGCTAATTCTTGTATGAGTTTGTTGCAATGGGAAAGAATTGAAAGTTGTTTCATACTTTCATTGACTTTTATCTTTCT
TTTTCACAGACACTGTGTGCGAGCTGAACCAGTTATATACAAGAAACTTGAATCATCAGGCGATGATGTGGCACTCCTGAGGGCTTATGTTGGGGACAGACCCACGTGGAGGAACCCACT
GCACCCATGGAGGGTGGACTCGACGTTCAAGCTGAAAGGAGTCCCGACTTTAATCTTATGGGAGAAGGGTGAGGTTAAAGGTCGCCTTGAAGACCATGAAGCACACATTGAGAAAAAGAT
TGACTCGCTTCTCGCCACCAAATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTTGAAGACGGTTGACGCTACCTTATCGACCTTCAACGCCGTCTTCGAGAAATTCAAATCAGAAGCACCAAACAACAAGAACAATCTCATCTTGTTTTTGGCTGATAACGAACCT
TCCACTAATCGCAGTTGGTGCCCTGACTGTGTGCGAGCTGAACCAGTTATATACAAGAAACTTGAATCATCAGGCGATGATGTGGCACTCCTGAGGGCTTATGTTGGGGACAGACCCACG
TGGAGGAACCCACTGCACCCATGGAGGGTGGACTCGACGTTCAAGCTGAAAGGAGTCCCGACTTTAATCTTATGGGAGAAGGGTGAGGTTAAAGGTCGCCTTGAAGACCATGAAGCACAC
ATTGAGAAAAAGATTGACTCGCTTCTCGCCACCAAATGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AATAATCTAC CCGTGCCCGT TGATGAAGGG AGTGTATTGT ATATTTCATA AAGTATAAGG TTGATATGTG ACAATCATCA TCTTGTTGTG TATAAATCAT AAACGAAGAA TCAATCAATC  GTATCCCCAT TGTTGTAAGT AAAAAAGATG CCTTTGAAGA CGGTTGACGC TACCTTATCG ACCTTCAACG CCGTCTTCGA GAAATTCAAA TCAGAAGCAC CAAACAACAA GAACAATCTC  ATCTTGTTTT TGGCTGATAA CGAACCTTCC ACTAATCGCA GTTGGTGCCC TGACTGTGTG CGAGCTGAAC CAGTTATATA CAAGAAACTT GAATCATCAG GCGATGATGT GGCACTCCTG  AGGGCTTATG TTGGGGACAG ACCCACGTGG AGGAACCCAC TGCACCCATG GAGGGTGGAC TCGACGTTCA AGCTGAAAGG AGTCCCGACT TTAATCTTAT GGGAGAAGGG TGAGGTTAAA  GGTCGCCTTG AAGACCATGA AGCACACATT GAGAAAAAGA TTGACTCGCT TCTCGCCACC AAATGAACAT CCTGATGACC AGACCACCAT GGTTGCATAA TAAGCTGCAT CTGCTATATG  ATGTTTAGAC TTGTTGACCA TAGAATAATT GAGGTTATGA CATCAAATAT GTTTTGAGTT TAATACTATG CAAGATCGTG TTGGGATTAA TTAATAGTTT GCCTTACTTT ATGCTGGAAT 
TTTATGGGTA TATTCTTTCA AACTTGAAGG TTGGCTGTGT TAGCCTTGGA CCGGGAAACC GGCCGGTCGG ACTGGTTTTT GGAAGGGTTG GACCGGTTTT TTATATATAT ATATAG 

Retrieve as FASTA