View Redoxidase 14249

Entry information : HaCPF03 (HanXRQChr13g0399791)

Entry ID	14249
Creation	2016-11-28 (Christophe Dunand)
Last sequence changes	2016-11-28 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaCPF03 (HanXRQChr13g0399791)

Name (synonym)

HaCPF03 (HanXRQChr13g0399791)

Class

CPF Grx [Orthogroup: CPF003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaCPF03 start..stop	S start..stop
ThasCPF04	348	1.63e-123	1..231	1..234
ThasCPF03	330	2.16e-116	1..231	1..234
AtCPF04	325	2.48e-114	9..231	12..235
AtCPF03	320	2.61e-112	12..231	17..237

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14249' 'complement(join(85168393..85168401,85168496..85168576,85168684..85168791,85168869..85168942,85169419..85169521,85169594..85169692,85169905..85169991,85171222..85171282,85171394..85171468,85171552..85171556))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	85171552..85171556	3	N° 2	85171394..85171468	73	N° 3	85171222..85171282	59	N° 4	85169905..85169991	85
N° 5	85169594..85169692	97	N° 6	85169419..85169521	101	N° 7	85168869..85168942	72	N° 8	85168684..85168791	106
N° 9	85168496..85168576	79	N° 10	85168393..85168401	7
complement(join(85168393..85168401,85168496..85168576,85168684..85168791,8516886 9..85168942,85169419..85169521,85169594..85169692,85169905..85169991,85171222..8 5171282,85171394..85171468,85171552..85171556))

Literature and cross-references HaCPF03 (HanXRQChr13g0399791)

DNA ref.	HanXRQ genome: HanXRQChr13 (85171556..85168393)

Protein sequence: HaCPF03 (HanXRQChr13g0399791)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	233 (296)
PWM (Da):	26656.85 (32564.5)
PI (pH):	5.41 (6.50)	Peptide Signal:	cut: 24 range:24-319

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASVKEVLPPVLDSTSQPPPLFDGTTRLYTNYQCPFAQRVWITRNYGLQDKIKLVPIDLANRPAWYKEKVYPENKVPSLEHNNKIIGESLDLAKYLDAHFDGPALLPNDPAKREFAEELFTYTDTFSKTVLSSFKGDVVKEAGVA
FDYLESALQKFDGPFFLGEISVDFVYIPFVERFQIFIQEVFKYDITSGRPKLAAWIEELNKIDAYTVTKADPEHVIQLYKKRFVDQ*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTAAGAACATCTCTCATCTCTCTCTATTTCTATTTCAATTTGAATTTGATTTTGAAGTTAATATTGATGTATTTTTGTGATAGTATAGCGTGAAGGAGGTTCTTCCGCCAGTGTT
GGATTCTACTTCTCAACCGCCTCCTTTGTTCGACGGAACCACTAGGTATTCGTTCGTGATGTTATCGATTAGTTTAATTGAGTTTAGTGTCACTTTGTTTGTGGTTTAGTGTGATCTGAA
GTTCGTTAATTGGTTTGATTTTGTTTTCAATTGAAGGTGTTATACACAAACTACCAATGTCCCTTCGCACAGCGTGTTTGGATCACCAGGAATTATAAGGTAAATTTGTGGATCTATTCT
ATTGTTTGTAATTTATTTATGATAATTTATAGGTGCACACTTTTTTAGCCCTAAACACTTGATAAAATATTCAATCTGATTTGTTTGGTTGGGTTTTTAAAGATTATAAAATTAGACAAA
TATCATGTGACAGTTTAGTTTATACTTGACCTAAATTCCCTTATTAGTTTAAAGTAAAGTTAAACCTCATGTGACAGTTTAGTTTATACTTGACCTGCGTTGAATGAGCTCTAGGGTATG
TCAACTATGACTAATTGTTTAATCTACTTGAGCATAGTATCATTCATCACATAATACTAAATGATTGCGATAACAAAAAGAACAAATCCATATCATTAACTTTTTTTTTTTTTTTAATTT
ATGACTCAGTTTAGAAAAAATTATGTTTTTTTATGTATACATCAAAAGTAAAAAACCATCAAATAGGTTTTTTCATATGATTTTAAATTCCTATATATGAACAAATAAACTATTTTTTCA
TTTATTTGTTTAATAAAAGGAGAGATGGATGATAAGTTCATATTCATATGCCTTTCTTTTATATTTAAGTTTTTGATGATTAGAAATATAAATGTTTCATTTTGTTCTACAAATAGATCC
TTCCCTTATACTTGTGTGTCACATCCCTTCCTTCAAATTATGTGAGGGAGACTTTTATTTTATGAAAAGTGGTGGTAGATGGTTGCGAGTAGAGAGGAGAAAAAATGTTACTGTTCATCA
TCTGTAAATTTGAGGGGGCACTATTCACTCTTTATAATTTTTTAATATATTTTGAAAGTGGTTGTGAGTGGAAGTGAGAGAAAATGTAATGATAAATGTATTAAAAAGTATTATTTAATT
GAAAATGAGAGAGAAAAGATAGTGATTTTTAGTGTAATAAGGGTAAAAAAATAGGGGGTTGGATGTGAACAGTGGTGGATCCAAGAACTTCTTTCAGTAGGTTCGTTTTGGTAGATTCTC
ACTAGTTTTTTTTCCAAACCGAGTGGGTTCATGTGAACCCATAAAACAAGGCTGGATCTGCCACTGGATGTGAATGCTCTAAGGTAAGGTTGCTTAATGCATAACCAATTTTAAGTAGAG
AACTGCATAACCAAACACTCATACCTATAATGGTTACAAGTAACTTCAAGATCAAGATAGAAAATGTTGGTAGAATTTATATCTCGAAATTAAATTTACATTTTTAAATATCTGGATTTT
GATGTGTAGGGGGACTACAAGACAAGATTAAGCTTGTTCCTATAGACCTTGCTAATAGACCCGCATGGTACAAGGAGAAAGTTTACCCAGAAAATAAGGTATACATTGTTGCTATTCAGT
TTTAATTTGGTATTTAATGAGAAAAATATTTCAAGCTCTTTTTTTATACACAAAAACACTTGATATAATAGCTTGCAAGCATTTTCTTTTCTTTTATGATTTTAAAAAGGTTTATTCTAA
AAATAATAATGTTTAAGTAATTGTTTAAGGTGTATAATGTTGTATCGATGATAATTATATGTTATTTAAGGTGTGCCATCTCTTGAACACAACAACAAAATCATTGGAGAGAGTCTGGAT
TTGGCGAAATATCTAGATGCTCACTTTGACGGGCCTGCATTACTACCAAATGTAAGATTTAACTAACATCTGTCACATTTCCATTTTTACCCCCTCTCAAAGTTGTAACAAGCTTTTGTA
TAGGAGACCCTGCCAAACGAGAGTTTGCTGAGGAGTTATTCACATACACTGACACATTTAGTAAAACAGTGTTATCATCGTTTAAAGGAGATGTTGTGAAAGAAGCTGGTGTGACTCAAA
ACTTTTCTTATAGCTCCTTTTGTATTTAATTTAGGAGTTGAATGTCATTTTAGTCCCTGTGGTTTGGGCCATTTTGCCAGTTTAGTCCAAAGGTTTCATTTTTTGCCTGTGGGTCCAAAA
AGGTTTCACCGTTGCCATTTTAGTCCACTGGGTTAACTTCATCGATTATTTCTGTTGACGAGAAGGGCAATTGGGTCATTTTGTATGGCCGAATTGCTCTTCTAGTTAACAGAATTACAT
ATAAAATGACCCGAATTGTCCTTTTCGTTAACAGAAAAAATGGATGAAGTTAACCCAGTGGACTAAAATGGCAATGGTGAAACCTTTTTGGACCCATAGGCGAAAAATGGAACCTTTGGA
CTAAACTTGCAAAATGTTCCAAACCACAGGGACTAAAATGGCATTTAACTCTTAATTTAGCTATCAAATACTAGTTATGAACTTATAATTTGAAATTTGATCAGGTGTGTTGCTTTTGAT
TACTTGGAATCAGCTCTTCAGAAGTTTGACGGTCCGTTTTTCCTCGGAGAGATCAGTTTGGTGAGTATTCTGTCGAATCGAGCCACTATAAATTTTTACGGGCAGGTTGTTATTGCTAAA
AACCTTATGAATTGCAGGTGTGGACTTTGTTTATATTCCTTTTGTAGAAAGGTTTCAAATATTCATACAAGAGGTATTCAAATATGATATTACCTCAGGCAGGCCAAAATTAGCAGCATG
GATAGAGGTATCAGTTTTTTTTTTTTTTGGTTAACTCCATTGGCTTTAATGGTCAAATGATCTTATTCCAACAAGTTTTTAGAAGTATTTAATTTTAACATTAACCTTATACAGGAGAAC
TGAACAAAATTGATGCGTACACAGTGACAAAAGCGGACCCTGAACACGTTATTCAGTTGTACAAAAAGCGTTTTGTGGTAACTAGCGTTTCGCAGCACATACAAAGTTTCTTTTTATATT
TTTTTATGTTGGTTAAATAATTAGGTAATGCATCATATATCATTGTTGCAGGAGATCAGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAGCGTGAAGGAGGTTCTTCCGCCAGTGTTGGATTCTACTTCTCAACCGCCTCCTTTGTTCGACGGAACCACTAGGTTATACACAAACTACCAATGTCCCTTCGCACAGCGTGTT
TGGATCACCAGGAATTATAAGGGACTACAAGACAAGATTAAGCTTGTTCCTATAGACCTTGCTAATAGACCCGCATGGTACAAGGAGAAAGTTTACCCAGAAAATAAGGTGCCATCTCTT
GAACACAACAACAAAATCATTGGAGAGAGTCTGGATTTGGCGAAATATCTAGATGCTCACTTTGACGGGCCTGCATTACTACCAAATGACCCTGCCAAACGAGAGTTTGCTGAGGAGTTA
TTCACATACACTGACACATTTAGTAAAACAGTGTTATCATCGTTTAAAGGAGATGTTGTGAAAGAAGCTGGTGTTGCTTTTGATTACTTGGAATCAGCTCTTCAGAAGTTTGACGGTCCG
TTTTTCCTCGGAGAGATCAGTTTGGTGGACTTTGTTTATATTCCTTTTGTAGAAAGGTTTCAAATATTCATACAAGAGGTATTCAAATATGATATTACCTCAGGCAGGCCAAAATTAGCA
GCATGGATAGAGGAACTGAACAAAATTGATGCGTACACAGTGACAAAAGCGGACCCTGAACACGTTATTCAGTTGTACAAAAAGCGTTTTGTGGATCAGTGA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CCCTCTATAA ATATAACGAT ATCCCCGTTA CATGTGTCTT ACTCTCGTCT GTCTTCACTT CACCGTTTCT CGAAGCATCT CATAACAATA ATAATGGCTA GCGTGAAGGA GGTTCTTCCG CCAGTGTTGG ATTCTACTTC TCAACCGCCT CCTTTGTTCG ACGGAACCAC TAGGTTATAC ACAAACTACC AATGTCCCTT CGCACAGCGT GTTTGGATCA CCAGGAATTA TAAGGGACTA CAAGACAAGA TTAAGCTTGT TCCTATAGAC CTTGCTAATA GACCCGCATG GTACAAGGAG AAAGTTTACC CAGAAAATAA GGTGCCATCT CTTGAACACA ACAACAAAAT CATTGGAGAG AGTCTGGATT TGGCGAAATA TCTAGATGCT CACTTTGACG GGCCTGCATT ACTACCAAAT GACCCTGCCA AACGAGAGTT TGCTGAGGAG TTATTCACAT ACACTGACAC ATTTAGTAAA ACAGTGTTAT CATCGTTTAA AGGAGATGTT GTGAAAGAAG CTGGTGTTGC TTTTGATTAC TTGGAATCAG CTCTTCAGAA GTTTGACGGT CCGTTTTTCC TCGGAGAGAT CAGTTTGGTG GACTTTGTTT ATATTCCTTT TGTAGAAAGG TTTCAAATAT TCATACAAGA GGTATTCAAA TATGATATTA CCTCAGGCAG GCCAAAATTA GCAGCATGGA TAGAGGAACT GAACAAAATT GATGCGTACA CAGTGACAAA AGCGGACCCT GAACACGTTA TTCAGTTGTA CAAAAAGCGT TTTGTGGATC AGTGAAGTTG ATGAAGTCCT TGGAATCATG ATCCTTTGGG TGAATAAAGT TGTATGTGTG TCAACTAGTA GTGTTGTGTC TGTCTTATAG ATGGAGAAAC ATATGGTCTT TTGTTGTTAC ATATGATGAT AATAAATGTA TTGCATAATT GCAGACTAGA TGGTGTCTGT CAAATGAACT GGTGTTGTGT TTCTTATTTT ATGTAGTATA TACAAGTGCA ACAGATGACA AACTAGACAT CCCAAGTATT ATTTTTTGTT TAAAAAGACT ACATACATAA TACAATCTGA
TTTTTATATC AAA

Retrieve as FASTA