Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
307 |
| PWM (Da): |
33418.52 |
Transmb domain: |
o272-294i |
| PI (pH): |
8.74 |
|
Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAGPVVDAAY LKSIENARRD IRALIVNKQC APILVRLAWH DAGTFDVRSK TGGPNGSIRN EKELAHAANR GLHIAVQLLE PIKAKYPNLT YADLYQLGGV VAVEATGGPT VDYVPGRRDS
KVSPPEGRLP DAKKGPMHLR DVFGTMGLSD RDIVALSGAH TLGRAHKDRS DFEGPWTPEP LKFDNSYFKE LLRGNRADLL KLPSDLCLLE DPIFRPLVEL YAADEEAFFR DYAAAHKRLS
ELGCTLPKNV HTTPTGTSMD GSMLSLNNPD TVILVQAGFG IAVAVGVAVL AYTYETRRRL KSLVKKA
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq (scaffold-AZZW-2019246-Chlorokybus_atmophyticus) and Genomic (Chlatm_Chrsp187S02929) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGGGC CGGTTGTCGA CGCGGCGTAC TTGAAGGTGA GCACCGCGCT GTGCCTGGGG CTGTTGTCGA ATTTGCCATG CTTAGTAGGG TTCTGGAGGA AAGTGGCGTG GATTCGGGGT
GGCGTGGTGT GCGGGACTGG TGTGAAGCGG TGATGTCTTG GCGAAATCTG TACTGAGTGT GATTATGGAT GAGTGTCGTA GCACGCGTGC AGCCGCTGCT ACGACAGTTC GCTGTTGACG
GTGAAAGCAT GTTGGGGCTA CCCTATGCAT GTGGCACAGA CATCGCATAG CACACACCTG GTGTTCAATT GTGATTGGAT GAGATTCGCG CTCGTTCGGA TTTGGACACC AGCTATGTCA
TGCTGCGGTC AACCTACCAT GTGCGTTTTT GCTCTTGTCA TCATTGTTAC ACACTTTGTA AGCCTTCAGC CGACGTCAGT TTACACTTGC CGCAATTGAC CAAAGATTCA GTTATGTACC
TTATTGTCTT ATCACACAGA GCATAGAAAA TGCAAGGCGC GATATTCGTG CTCTCATCGT CAACAAGCAA TGCGCTCCCA TTCTCGTGCG GCTCGCTTGG CATGATGCCG GCACTTTTGA
TGTCCGATCC AAGACGGGCG GACCCAATGG CTCCATCCGT AACGAAAAGG TACGCCAAAT GCATAGCGAC AACATCTGAC AGTCATGAAG CGCAAACAAT CACTGTTGAC AATTACAGCC
CTGTTTTACA CCAACATATT GCTTGGTACC TGAGACTCTC GTCTATGCAC AAAGCAAACT TTCTGTGTAC AAGTGTGTTT TGGCTTAACG CAAGCTTGAA GCAAGCATGT CTGTTGCAGG
AGCTCGCGCA CGCAGCAAAC CGCGGCTTGC ACATAGCTGT GCAGCTGCTG GAGCCGATCA AAGCAAAGTA TCCCAACTTG ACGTACGCGG ATCTCTATCA GCTCGGGGGT GTAGTTGCAG
TTGAGGCCAC TGGCGGTCCC ACTGTTGATT ACGTGCCAGG CCGTAGAGAC TCCAAGGTTG ATTGTTGGTA CAAAACACTT ATTGACAGGA TGCAGTGCAT GGAGTGTCGT CTAATTTCAG
CTCTCTTTGC GGCTTGTCTT GGCAGGTGTC ACCACCAGAG GGTCGACTTC CAGATGCGAA GAAGGGTCCA ATGCACCTTC GGGATGTGTT TGGAACCATG GGCTTGTCCG ATAGGGATAT
CGTTGCACTT TCGGGTGCCC ACACTTTGGT ACGTGTGTGC TGTATGGTCA TTTACGTGGC ATTGCAGGCA CGGTAGCTGA CTTGAATTGT GGATCGATAG GGCCGAGCGC ACAAGGATCG
CTCTGATTTT GAAGGCCCTT GGACTCCGGA GCCCTTGAAG TTTGACAACT CTTACTTTAA GTGCGTGGGT GTCATTCTTG TCAGCCGGTT TTTGGTATGA TGAACAGTGC GTGCAGTGTG
TTGACTTGTT TCATGGCTGC ATTGTTCAAC AGGGAACTTC TGAGAGGCAA CCGAGCGGAT TTGCTCAAGC TGCCATCGGA TCTATGCTTG CTGGAAGACC CAATTTTCAG GCCGCTTGTG
GAGCTTTATG CTGCGGTACC CTGCCAGTCT GTGCTGATTG CATATGTGTG ATACTACCCT TGCTAATTGA GGATGTTTAA TGAGCTTGTC GTGGCAGGAT GAGGAGGCCT TCTTTAGGGA
TTATGCGGCA GCGCACAAGC GCTTATCAGA ATTGGGCTGC ACTCTGCCAA AGAACGTCCA CACGACGCCA ACCGGCACCT CTATGGACGG CTCTATGCTT TCTCTCAACA ATCCCGACAC
GGTGATCCTC GTCCAGGCCG GCTTTGGCAT TGCCGTCGCT GTTGGCGTGG CCGTCCTCGC GTATACGTAT GAGACAAGGC GGCGTTTGAA GAGTCTTGTC AAGAAAGCTT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGGGC CGGTTGTCGA CGCGGCGTAC TTGAAGAGCA TAGAAAATGC AAGGCGCGAT ATTCGTGCTC TCATCGTCAA CAAGCAATGC GCTCCCATTC TCGTGCGGCT CGCTTGGCAT
GATGCCGGCA CTTTTGATGT CCGATCCAAG ACGGGCGGAC CCAATGGCTC CATCCGTAAC GAAAAGGAGC TCGCGCACGC AGCAAACCGC GGCTTGCACA TAGCTGTGCA GCTGCTGGAG
CCGATCAAAG CAAAGTATCC CAACTTGACG TACGCGGATC TCTATCAGCT CGGGGGTGTA GTTGCAGTTG AGGCCACTGG CGGTCCCACT GTTGATTACG TGCCAGGCCG TAGAGACTCC
AAGGTGTCAC CACCAGAGGG TCGACTTCCA GATGCGAAGA AGGGTCCAAT GCACCTTCGG GATGTGTTTG GAACCATGGG CTTGTCCGAT AGGGATATCG TTGCACTTTC GGGTGCCCAC
ACTTTGGGCC GAGCGCACAA GGATCGCTCT GATTTTGAAG GCCCTTGGAC TCCGGAGCCC TTGAAGTTTG ACAACTCTTA CTTTAAGGAA CTTCTGAGAG GCAACCGAGC GGATTTGCTC
AAGCTGCCAT CGGATCTATG CTTGCTGGAA GACCCAATTT TCAGGCCGCT TGTGGAGCTT TATGCTGCGG ATGAGGAGGC CTTCTTTAGG GATTATGCGG CAGCGCACAA GCGCTTATCA
GAATTGGGCT GCACTCTGCC AAAGAACGTC CACACGACGC CAACCGGCAC CTCTATGGAC GGCTCTATGC TTTCTCTCAA CAATCCCGAC ACGGTGATCC TCGTCCAGGC CGGCTTTGGC
ATTGCCGTCG CTGTTGGCGT GGCCGTCCTC GCGTATACGT ATGAGACAAG GCGGCGTTTG AAGAGTCTTG TCAAGAAAGC TTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGGGC CGGTTGTCGA CGCGGCGTAC TTGAAGAGCA TAGAAAATGC AAGGCGCGAT ATTCGTGCTC TCATCGTCAA CAAGCAATGC GCTCCCATTC TCGTGCGGCT CGCTTGGCAT
GATGCCGGCA CTTTTGATGT CCGATCCAAG ACGGGCGGAC CCAATGGCTC CATCCGTAAC GAAAAGGAGC TCGCGCACGC AGCAAACCGC GGCTTGCACA TAGCTGTGCA GCTGCTGGAG
CCGATCAAAG CAAAGTATCC CAACTTGACG TACGCGGATC TCTATCAGCT CGGGGGTGTA GTTGCAGTTG AGGCCACTGG CGGTCCCACT GTTGATTACG TGCCAGGCCG TAGAGACTCC
AAGGTGTCAC CACCAGAGGG TCGACTTCCA GATGCGAAGA AGGGTCCAAT GCACCTTCGG GATGTGTTTG GAACCATGGG CTTGTCCGAT AGGGATATCG TTGCACTTTC GGGTGCCCAC
ACTTTGGGCC GAGCGCACAA GGATCGCTCT GATTTTGAAG GCCCTTGGAC TCCGGAGCCC TTGAAGTTTG ACAACTCTTA CTTTAAGGAA CTTCTGAGAG GCAACCGAGC GGATTTGCTC
AAGCTGCCAT CGGATCTATG CTTGCTGGAA GACCCAATTT TCAGGCCGCT TGTGGAGCTT TATGCTGCGG ATGAGGAGGC CTTCTTTAGG GATTATGCGG CAGCGCACAA GCGCTTATCA
GAATTGGGCT GCACTCTGCC AAAGAACGTC CACACGACGC CAACCGGCAC CTCTATGGAC GGCTCTATGC TTTCTCTCAA CAATCCCGAC ACGGTGATCC TCGTCCAGGC CGGCTTTGGC
ATTGCCGTCG CTGTTGGCGT GGCCGTCCTC GCGTATACGT ATGAGACAAG GCGGCGTTTG AAGAGTCTTG TCAAGAAAGC TTGACGAGCA AGTGAAAACT GGTGAAGTGC TTTGTCGTGT
CAAACTTGGT TGTGATGAGA CTTGTGCTGT AGCGAGACGA CTCGCTGGCT TCGCTGTCTG TATGTAGCCC TTTCCCCATT GTATAGAGCC GTGTATGTAC CAATAGCTGC GTGTATGAAG
CGTGCATTGT GTCCTGTG
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Retrieve as FASTA
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