Entry information : LtPrx07
Entry ID 1439
Creation 2005-09-28 (Christophe Dunand)
Last sequence changes 2015-12-17 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: LtPrx07
Name LtPrx07
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Magnoliaceae Liriodendron
Organism Liriodendron tulipifera    [TaxId: 3415 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LtPrx07
start..stop
S start..stop
NnPrx06 196 2e-63 9..141 10..145
CruPrx16 184 3e-60 28..141 9..121
PtaPrx129 187 3e-60 27..141 26..139
AmajPrx04 183 2e-59 9..141 7..141
Literature and cross-references LtPrx07
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   CO998228.1 [Fragment]
Protein sequence: LtPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   141 (121)
PWM (Da):   %s   15065.39 (12811.1)  
PI (pH):   %s   4.02 (3.92) Peptide Signal:   %s   cut: 62 range:21-141
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVSYPFSALL MLKLLIFLSS NPNSFFTQAC LASGSLQADT YQTGCPDVEA IVFAGVERAM ADDPRMAASL LRLHFHDCFV NGCDASVLLD DTLTFEGEKT AAPNLNSLRG FEVIDAIKSE 
LEFACPETVS CADILAIAAR D 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAGCT ACCCTTTTAG TGCTTTGCTT ATGCTCAAGC TACTGATCTT CTTGTCCAGC AATCCAAATT CCTTCTTCAC ACAAGCATGC CTAGCCAGTG GCTCTCTACA AGCCGACACA  TACCAGACCG GCTGTCCCGA TGTGGAAGCA ATTGTGTTCG CGGGTGTAGA GCGCGCCATG GCTGACGACC CACGAATGGC TGCGTCGCTT CTCCGTCTAC ATTTCCATGA TTGCTTCGTT  AATGGCTGCG ACGCATCAGT GCTGTTAGAC GACACACTTA CATTTGAAGG AGAGAAGACA GCAGCGCCTA ACTTGAATTC ACTGAGAGGG TTTGAGGTGA TTGATGCTAT CAAATCAGAG 
CTGGAATTTG CATGCCCTGA AACCGTTTCT TGCGCTGATA TTCTTGCAAT TGCAGCTCGC GAC 

Retrieve as FASTA