1. Browse the Database
  2. View Redoxidase
Entry information : HaGrxC03 (HanXRQChr05g0142181)
Entry ID 14407
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGrxC03 (HanXRQChr05g0142181)
Name (synonym) HaGrxC03 (HanXRQChr05g0142181)
Class CGYC Grx    [Orthogroup: GrxC004]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGrxC03
start..stop		 S start..stop
AtGrxC04 181 2.98e-60 1..129 3..131
ThasGrxC04 170 2.87e-56 32..132 32..133
MpalGrxC01 168 4.03e-55 14..123 27..136
MpGrxC01 162 8.1e-53 13..123 27..137
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14407' 'join(102587987..102588138,102588279..102588352,102589657..102589755,102589850..102589923)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 102587987..102588138 150 N° 2 102588279..102588352 72 N° 3 102589657..102589755 97 N° 4 102589850..102589923 72
join(102587987..102588138,102588279..102588352,102589657..102589755,102589850..1 02589923)


exon

Literature and cross-references HaGrxC03 (HanXRQChr05g0142181)
DNA ref. HanXRQ genome:   HanXRQChr05 (102587987..102589923)
Protein sequence: HaGrxC03 (HanXRQChr05g0142181)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132 (110)
PWM (Da):   %s   14351.44 (12042.1) Transmb domain:   %s   i5-22o
PI (pH):   %s   7.51 (7.51) Peptide Signal:   %s   cut: 28 range:23-132
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASTVTISSVFIILLTIATVFTSNTEASSVDFVKKTVSSHPIVIF
SKSYCPYCKRAKGVFKELNVKPYVLELDEEDGSKIQDALSEMVGRRTVPQVFINGKHLGGSDDTVEAYQSGELAKLLGIESHKTDL

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGCACCGTCACCATTTCTTCCGTTTTCATCATCCTCTTAACCATTGCCACCGTCTTCACATCCAATACCGAAGCATCATCCGTCGATTTCGTCAAGAAAACTGTCTCTTCTCAC
CCCATTGTCATCTTCTCCAAATCCTACTGTCCCCGTACGTATTTTTCATTTCTATCAAATTGTTTGATATACCTACCTACCACTGTTTAATTAATTATTATTAAAGATTTATGAAATTGT
TGGTATAAATGTTTGAAATTGTTGTTGTGTTGATGATTTGTTTGTTGTTGGTAGGTATTGTAAAAGGGCAAAAGGTGTATTCAAGGAGTTGAATGTGAAACCTTATGTACTCGAGCTCGA
TGAGAGAGAGGTGAATACTTTTGGATTCTTATATTTATTATTGCTAAACAATTATTTGGTATAAGTTTAGCAACGATTTGGATGATGCGAATTGCTTAACTGATTCTGCTCAGGGGCGAA
GTATAGAAGGGGCGGGAGGGGGCGCCCGACCCCCGAACTTTTCGCTCAGTAGTGTTATATATATAGTTTTCAGATAGAAATTTTTGGGTATATATCTTTTTGACCCCCGACCCCCCGGTT
CTATAGAAATTTTTTGGTATATACGTTTTCGCCCACCCCCCTCCCCTGCGCGTCATTCGGGTCAAGCTTCGCCACTGATTCTGCTAGATGGGTTGTGTTAGATTAAAATGGGAAAATAGA
ATCGGTGCACGAAAAGTGTTAAGTGCATCACTGTTTTTATGTCAATGACTAACATGAGAATTCAACTTTAAATCATAAACCCTAACAAAGACTTTGTTAAGGATTGGTAAATGATAAGCT
TGGCCTTGTGATTGTTGAAGACATAGTTTGCTAATGCTAACATTCCTTTTATCAAAGTATTATTTTTCTTTCATATTTTTAATTACAGCGAATGATAAGTTTGATCTTGTGATTTTCGAC
GCTAACATTTCTTCTACAAAAAGGGTAAAATTTTATCAAAAACATCTACGTCGACATTGGTTAAGGTCGACAAATTATGAATTTATGATATCCATCCACATAAAACAAGATTACCAAAGT
ATAGTCTTTATCTGTTTTCTTGGACTAATTTGCATGACCGTATTTGTTTTCGATATTATTGTTTGGTTTATATAGAACATGTTAGTAAAGGTTGTTTGTTATAATTATTTTAGAGTAAAC
TGCCAAAATGGTCCCTGAGGTTTGGTCACTTTTGCCACATTAGTCCAAAACTCAAACCTTTTGAATCTGGGTTCCCGTGGTTTCAGTTTTGTTGCCATTTTCATCCAAAATCAAAATATA
ATCAGATTTTTCAGTTAACATCCAGCTTTTCTATCTTTTTCCTCTCTTTTAACGAAGGACAAAATGGTCTTTTAACGTTTTATCATAACAAATTAAAAAAATCTAACATTTTGCCCTTCG
TTAAAAGGGAGGAAAAAGACAGAAAAGCTGGATGTTAACTGAAAAATCTGATTATATTTTGATTTTGGATGAAAATGGCATCAAAATTGAAACCACATGGACCCAGATTCAAAAGGTTTG
AGTTTTGGACTAAAGTGACCAAACCTCAAGGACCATTTTGGTAGTTTACTCTTTATTTTAAGATTGTGGGATTTTCGTTATTTTAAAATTTATGGGATGTACTTCGTTTTGCAGAGGACG
GGTCGAAAATTCAGGATGCATTGAGTGAGATGGTTGGGAGGCGTACTGTTCCACAAGTGTTTATCAATGGGAAACACCTCGGAGGTTCGGATGTGGTAAGTTAAACATCAAGCAACTCTA
ACCACATTTTTGTTGCTACAATCACATGTTAGCTTAATAAACTTTTTGTCTATTGGTCTGTATCTATAGATACTGTTGAAGCTTATCAGAGTGGAGAATTGGCAAAGCTTCTTGGCATTG
AGAGTCATAAAACGGACCTTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGCACCGTCACCATTTCTTCCGTTTTCATCATCCTCTTAACCATTGCCACCGTCTTCACATCCAATACCGAAGCATCATCCGTCGATTTCGTCAAGAAAACTGTCTCTTCTCAC
CCCATTGTCATCTTCTCCAAATCCTACTGTCCGTATTGTAAAAGGGCAAAAGGTGTATTCAAGGAGTTGAATGTGAAACCTTATGTACTCGAGCTCGATGAGAGAGAGGACGGGTCGAAA
ATTCAGGATGCATTGAGTGAGATGGTTGGGAGGCGTACTGTTCCACAAGTGTTTATCAATGGGAAACACCTCGGAGGTTCGGATGATACTGTTGAAGCTTATCAGAGTGGAGAATTGGCA
AAGCTTCTTGGCATTGAGAGTCATAAAACGGACCTTTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TAAACCTAAA CCATCAAAGC CTTAAAAATA AACCATAGAC TTTCCATTCT AGACATGTGG CTTCCTTGAC GGAGTCATAG AATATAGGGT TTAAATCAAG CTGAAATTCA GATCTAAATT  TGACGCCGAC AGTTGTACCA AAAACCGCTA TCACCGTCGC AAAATGGCCA GCACCGTCAC CATTTCTTCC GTTTTCATCA TCCTCTTAAC CATTGCCACC GTCTTCACAT CCAATACCGA  AGCATCATCC GTCGATTTCG TCAAGAAAAC TGTCTCTTCT CACCCCATTG TCATCTTCTC CAAATCCTAC TGTCCGTATT GTAAAAGGGC AAAAGGTGTA TTCAAGGAGT TGAATGTGAA  ACCTTATGTA CTCGAGCTCG ATGAGAGAGA GGACGGGTCG AAAATTCAGG ATGCATTGAG TGAGATGGTT GGGAGGCGTA CTGTTCCACA AGTGTTTATC AATGGGAAAC ACCTCGGAGG  TTCGGATGAT ACTGTTGAAG CTTATCAGAG TGGAGAATTG GCAAAGCTTC TTGGCATTGA GAGTCATAAA ACGGACCTTT GAGCTTCAAG CCTTAGACAG CCTAATAATG CCGTAATTTG  TACGAATGTT GGTAGTTTAA GTTGACTTGA GTTTACGATT ATGTCAAAAT ATGTACCAAT AAATTTGGAT ATGATACCGT TTGTATTACA TATTCGGCCT ATTACCTCTC TATATACCGA  TAAAGTAGAC TTGAGGAACC TTGGTGTCTC GTTATGGTCA CGCGTCAGAT TAAAACCGAA CGGTACCAAA AATATAACCG AAAATTTGAA GTGTGGGTTT CATAAAAGTT TAGAAACTCT 
GGTTTAAAAA ACTGGCTTTA ATGGTCTAGA TGCAGTTATA CATATGTACA GTATTTAT 

Retrieve as FASTA