Entry information : HaGrxC13 (HanXRQChr10g0280311)
Entry ID 14417
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGrxC13 (HanXRQChr10g0280311)
Name (synonym) HaGrxC13 (HanXRQChr10g0280311)
Class CGYC Grx    [Orthogroup: GrxC003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGrxC13
start..stop
S start..stop
HaGrxC24 239 3e-82 8..171 1..164
ThasGrxC05-2 196 6e-65 1..169 3..177
AtGrxC05 190 1e-62 1..169 1..167
ThasGrxC05-1 188 4e-62 1..169 3..167
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12177827..12178104 278 N° 2 12178181..12178254 74 N° 3 12180076..12180150 75 N° 4 12180834..12180860 27
N° 5 12181287..12181351 65  
join(12177827..12178104,12178181..12178254,12180076..12180150,12180834..12180860 ,12181287..12181351)


exon

Literature and cross-references HaGrxC13 (HanXRQChr10g0280311)
DNA ref. HanXRQ genome:   HanXRQChr10 (12177827..12181351)
Protein sequence: HaGrxC13 (HanXRQChr10g0280311)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172 (71)
PWM (Da):   %s   18508.64 (8152.5)  
PI (pH):   %s   9.92 (9.52) Peptide Signal:   %s   cut: 25 range:25-95
Sequence 213
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATSSHLTTSSLTSVSLSTTSLSHFPNSPSSLSFTTIQYPKPLYKTTTTRTTKHGGLKIHAMTASFGSRLEESVKKTVTDNPVVVYSKTWCSYSSEVKSLFNRLGVEPLVVELDQMGAQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLHRKGELEGLLAEAKKA

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCAGCAACTTCTTCTCATCTTACTACTTCATCCCTCACCTCTGTTTCTCTCTCTACCACCTCTCTCTCTCACTTCCCCAACTCTCCCTCTTCCCTTTCATTCACCACCATTCAATATC
CAAAACCATTATATAAAACAACCACCACCAGAACAACAAAACATGGTGGGCTCAAGATCCACGCCATGACAGCTTCATTCGGATCTCGATTAGAGGAGTCTGTCAAGAAAACCGTCACTG
ATAATCCAGTCGTCGTCTATTCCAAAACCTGGTGTTC
GTAAGTTCACTTAGGGTTTTCTCTTTTCATATTTTGTAATTCATTTATTTCAGACTTTTTTGGTTTGATTGTGAAGGTATTCT
TCTGAGGTGAAATCGTTGTTTAATCGGCTCGGTGTGGAGCCGCTTGTTGTTGAATTGGACCAGATGG
GTAAGTGTTATTGTTTTTTATATATGTATTTGGGGAAAAAGTGAAATAAAGAG
TTGGAAGTTAAATTGATCTTGTAGGTTAGGTTTAGAAGTTTGTTTGATTAGGGTTTGGTGTACTTTTGTTATTGTAATTAGGGTTTGGATTTGAGTTTAAACATTTGGTGCAGCTGTTAT
AGTCTTTAAGTTTCGAAAACTTTAATCATACATTGAAAATATCTGAAAGTGAATTAGAGTGATACGGACTGAAACCATTGCTAGGTATGGGACTCGTCCCACATCAGTAGTATGGGTAAC
GAATGTGGGGTTTATAGACCAAATGGGCTCCATCACCCACCAGACTAGTCTTTTGGAATGACACGAGTTCTCTTGTAGTCCTGTTTGGGCTGTAACTTAGAGTCTTGAAACCATTGTAAG
CTTTTAAGAAGGTATACCATGTTATTAAGTTAATTTGGAGATTTTTGGTATTGGGGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTACAGAAATGTGAATTCAAGGTGTGTACGTCATTTG
TTTCGTTTAAATCGTATGTAATATGCACATACTGTATATATAGTCAAGATTTTTTGATTAAATCCAACATGCTATGCGTATGTTATCTTGAAGTCTACATAATGTTAGAAGCCGATTTGA
CTTTTGAGACAACTAATCTCCCAAGAACATTAGAGAAGAACAAGAACAACTTTGAATCTATTTTTTTTCTTATATACATAGTTGTTAATGGCGAATAACGACAAATAGCGATAAGGTACC
TATATGCTACATAGCGAATAGCGATAAATAGCGGGGCTATTTTATAAATAGCGATACACTAGAAAAAGAATTTTGAAAATTTTTATATGTATATTATATCAAAGTACCCTGGTATATACG
CTATTTTACATGAATATTTAACAAAAAACCTAAAATCCAGCTATTTTATAGCTATATTTAGTTGCTATTTATATTGAGAAAAAAACAAAAAATAAAATAAAATTGAAGTCCGCTATCCAT
CGCTACAGACCATATAGCGAGCATGGACCTATAACCACGCTATTCGCTATCGACCGTGGCGATCGCTATTGACAACTACGCTTATATAGGCTTACAAATAAAGAAGAGAACAACTAAACT
AATCCCATTACACCCACTACTTCTAAACTATAACACTAAATAAAAGGAAACCAAATGGAACTATTGAGCTATGCAGTTAATCGCGGCGCTATAGTAGCGGTGCTATAGCGTCGATGTAGC
GGTTATCGGTGGTAGCTCAAAATATCGGTTTGTAATATCGGTGTTATCTCGGACAGCGATTATATCGGCTATAAACACCGATATATCGCCGATATTTTGTATAATCTATATCGGTTGTCT
CGCCGATATCTCGTCTCGGTCAATTTTTTACATTTTTTTTTATACAAAACTGCATTTCACAGCAAAAAAAAGCGAAGTTTAAATGGTGCATAAATTACCGATATCCCACCGCGATAAACG
ATATCTCAAATATCGGTCCTTGACCGGTAACCGATATTTTTCCGCATTAACTGCATAGCTATTGAGCTAAAGCATGTGAACGTGAGGTGACTGCTGCATAAAGTATGGTGGGCTACATAT
CACATAACCACAACTTAATAAACGAATATATTCTTTTTAGTTGGAAACTGAAGAATCTCATTTCCCTATACCTTGAAGGCGCCTTAAATGTGATTATGTGAAGTATTATACAATATACAT
ACATGAACTATAATATTGAGGCAATTTTGAAAATTAACTGTTAGGACTTAGAAATACTGAATGTAGTTTTATCGTTTTCTTTTCTCAGGTGCACAAGGACCTCAGCTACAGAAGGTTCTT
GAACGGCTTACTGGGCAGCATACCGTTCCAAATGTTTTTATTG
GTATGTTGTAGTTGCATTAAGAATCTCATATGATTCTCCACTTGAGAACTAAGTATGCTCTAATTTGTATTGAACTA
ACCTCGAACATAGCAGTTATTGCCTAAATTTTATATTGTGCCCGAATTTGCATGATATAAAATGTAATAGGCGTGGTGATTTCGACCCATTTAGTATATACGGGTCGAGTTGGGCTATGT
TTTGTCTGAAATGGAAAAGGGAACAAGTCAAATGGGTTAAAATTGCGCAAAAGTGAATTTAAGTGCATACAACCTCTAAAGAAAAAAAATTGAATTATTTTTGTAATGATTTATCTTCTT
ATTTTGTAATTATATAGTAAACACATTAATTACTTATTAAGGCATAAAGGAAAAAAAAATGGACAAAGCGTCATGAGAATCTGACTCAACCTGTCGACTCACCCATTTTGCCACCGCTAA
AACATATATTTTTTTTCGTAGCGACAGACAATTTAGGATATGTGTCTGCTGCTGAATATGATGCAGTAAATGCTGAGTGCTGACCTTCCATCACTTTTTTCACAATATTAACATTTAACA
ACACTCAATAGAAGAAATATTGAAATGAAAATAGAAATAAAATATATCTACAGTAGCGTTCAGTATAAATTTTGTGCTTTAATTTCTTATTCTAATTTGTTCATTTATCTTGTTCTGTGA
TAACAGGGGGCAAACACATCGGCGGTTGTACGGGTACCTTTTTTACCATATGCTTTTTGGCTACTTCATCTATCAACTATTCCTGTCGTTTTCGTTCTCTCTGGATATCATTATGCATGA
TTATGCAAACACGTTATTTTTCGTTTAAAGATTCGGGAAAATAGTTTGTGTTAAAATCGGTAATCACATGAAACCAAAATCATATATGACAGTATACACATGATTTAACATCCATAGATG
TTGATAGAGACATTTTATTTTGTGATCGTGAATTATTTACGTTACAAGTCATATCTACTTAGAAAACAAGGATGACTGTCCTAGCTGTATATGTAAGCGTTATCATTATGATTTATTTAC
CTTATAAGTCACATTTACTTACAACAATAGCCGATCTTTTCGATCTATGATGTTGTATAATAGTATAATACTGCAATGTCGTTTTGTGATCCGGTGCAGATACCGTTAAGTTACATAGGA
AAGGGGAACTTGAAGGTTTGCTGGCAGAGGCAAAAAAGGCATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCAGCAACTTCTTCTCATCTTACTACTTCATCCCTCACCTCTGTTTCTCTCTCTACCACCTCTCTCTCTCACTTCCCCAACTCTCCCTCTTCCCTTTCATTCACCACCATTCAATATC
CAAAACCATTATATAAAACAACCACCACCAGAACAACAAAACATGGTGGGCTCAAGATCCACGCCATGACAGCTTCATTCGGATCTCGATTAGAGGAGTCTGTCAAGAAAACCGTCACTG
ATAATCCAGTCGTCGTCTATTCCAAAACCTGGTGTTC
GTATTCTTCTGAGGTGAAATCGTTGTTTAATCGGCTCGGTGTGGAGCCGCTTGTTGTTGAATTGGACCAGATGGGTGCACAAG
GACCTCAGCTACAGAAGGTTCTTGAACGGCTTACTGGGCAGCATACCGTTCCAAATGTTTTTATTG
GGGGCAAACACATCGGCGGTTGTACGGATACCGTTAAGTTACATAGGAAAGGGG
AACTTGAAGGTTTGCTGGCAGAGGCAAAAAAGGCATAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AATCTTCCAT CCGTTGGCTT TTACGCAAAG AAAAGGTTCA AATTAGACGC AAAGGCCACC TCACCTAACA AGAAAAAGCC CCTTTGAGAT CACCACATAA AAAGTGTCAC TGACAGAAAC  ACACACAGAC CAAAAGGAAC AACCATCCTC ATCAATGGCA GCAACTTCTT CTCATCTTAC TACTTCATCC CTCACCTCTG TTTCTCTCTC TACCACCTCT CTCTCTCACT TCCCCAACTC  TCCCTCTTCC CTTTCATTCA CCACCATTCA ATATCCAAAA CCATTATATA AAACAACCAC CACCAGAACA ACAAAACATG GTGGGCTCAA GATCCACGCC ATGACAGCTT CATTCGGATC  TCGATTAGAG GAGTCTGTCA AGAAAACCGT CACTGATAAT CCAGTCGTCG TCTATTCCAA AACCTGGTGT TCGTATTCTT CTGAGGTGAA ATCGTTGTTT AATCGGCTCG GTGTGGAGCC  GCTTGTTGTT GAATTGGACC AGATGGGTGC ACAAGGACCT CAGCTACAGA AGGTTCTTGA ACGGCTTACT GGGCAGCATA CCGTTCCAAA TGTTTTTATT GGGGGCAAAC ACATCGGCGG  TTGTACGGAT ACCGTTAAGT TACATAGGAA AGGGGAACTT GAAGGTTTGC TGGCAGAGGC AAAAAAGGCA TAATTCTACT CTTTACTCCA GATGTGTTGT ATCAATAAGA AATAGTTGTC  TGATTATTTT TTTTTTTCAC AAATTTTAAA GCTGCACAAT TGTTTTATTC TCAAACAATG ATACCTTTTA TTTTAATTTG TGGCACTTGT CTTGTAGATT AAAAAGATGT AATTGGTATG 
ATAGTGAACA TATATGCATA TGTCATTGGC AAATCTTTTT CATTAAGATG TATAATCGTA AATATGTTGC TCAAACAGGA TTTGAGAGAT T 

Retrieve as FASTA