Entry information : HaGrxC23HanXRQChr15g0463031
Entry ID 14427
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGrxC23HanXRQChr15g0463031
Name HaGrxC23HanXRQChr15g0463031
Class CGYC Grx    [Orthogroup: GrxC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGrxC23
start..stop
S start..stop
HaGrxC01 179 3e-60 38..127 8..97
HaGrxC11 177 1e-59 39..127 5..93
HaGrxC17 177 2e-59 38..127 8..97
HaGrxC04 175 9e-59 38..127 8..97
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 322648..322757 110 N° 2 323743..323831 89 N° 3 323921..324019 99 N° 4 324779..324864 86
join(322648..322757,323743..323831,323921..324019,324779..324864)


exon

Literature and cross-references HaGrxC23HanXRQChr15g0463031
DNA ref. HanXRQ genome:   HanXRQChr15 (322648..324864)
Protein sequence: HaGrxC23HanXRQChr15g0463031
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   127
PWM (Da):   %s   13636.93  
PI (pH):   %s   6.52
Sequence 168
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSLWSRTQQQTSKEEIDMALSKAKQIVSDNPVVVFSKTWCGYCKGVKKLFSELNVSYKVIELDEESDGGEIQSALKEWTGQSTVPNVFIGGKHIGGSDAVMEKHRAGKLVPLLTEAGAIANTSAQL

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGAAGCCTGTGGAGCAGAACACAACAACAAACATCCAAAGAAGAAATCGATATGGCTCTTTCCAAAGCTAAGCAAATCGTTTCCGATAATCCCGTCGTCGTCTTCAGGTTTCTCTTCA
TTCAGAATTTCAATTCAGTTACATGATGCTGTTTTGTTTATTTAATACAACTTTTCATTGAATTTTTAAACCTAATCGCATGTTTTACAGAAACAACAGTTCACTAAATTTAGTTTTTTC
CACAAATCGTGAAAGGTTTTCGATTGGTTTGCGTTGCTGAATGATGTTATATTCATCATAGATTAGTATTAAGAAATTTAATTTGAGTTTGCTGCTAAATAACTAGTGTGTGTTACTGGA
AGAACAGTAAACTAAACTTTGTTTTTCCGACAATTTGTGAAAGTATAGATGCTGTTTCAAAACAGCCGTTTCTCTCGATCGATTTGTTTTGCAGAATGATGTTGTGCTCATCATAGATTA
ATCGCTAATCTCTCAGAAGTTTTGCTAGAAGAACAGTTAGTTAACTAACTTGAGTTTTTTTCCTACAAATCGTGAAAGTATATATGTAAAACAATCGTTTCCGATCGGTTTGTCTTGCAG
ATGTTGTGTTTATCGTGATTAGGCCGCAGAAGAGTTAACTAACTTGAGTTTTTCCGATAAATCGTAGAAGTATAGATGCAAAATGATCGCTTCTCGATCGGTGTGACCCGCTGAATGATG
TTAAATAATAAGTGTTGCTAGAAGAACACTTAACTAACTTGAATTTTTTTTCTCGACAAATCGAGAAAAGTATAGATGCAAAACAATCGGTTCTGGATCGATTTGTGTTGTTGAGTGATG
TTGCGTTCATCATAGATTAGTCTCTAATCTCTCAGATCAACAATTTAGAAATACTGCTGAATAACAAGTGTTCCTGGAAGAACAGTTGACTAAGTTTTGTTTTTCCAAAAAATAGTGAAG
AAAGTATAGATGCAAAACAACCGTTTTCGATAGGTTTATCTTGCTGAATGATGTTGTGTTCATCGCCAATCATCTATAGATTAGTCGCTAATCTCTCTGATCAGGAATTAAGAAACTTAA
CTTGATTTTGGCAGCAAGACTTGGTGTGGATATTGCAAGGGCGTGAAGAAACTGTTCTCCGAGCTTAACGTGTCCTACAAGGTTATCGAACTGGATGAAGAAAGTAAGTTTTGAATCTTT
TCATAAATTGATTTACATATCTGCATTTGTATCTAATAAAATTTGAAGAACTAATATATATGGATTTGATAGGTGATGGAGGTGAAATCCAATCCGCTCTAAAGGAGTGGACCGGTCAGA
GTACTGTTCCTAATGTGTTTATAGGTGGGAAGCATATTGGTGGCTCGGATG
GTGAGTTCTTTGAGCAATTTCGTGTCAGTTTTGAGTGATTGTTGATGGCGGATTTAGGGTTGTAAACGA
ACCGAACATTCACCGAACAGTTCGTGAACATTTCGGTGGGAAGTTCGTTTATGTTCGTTCGATTAGCTTAACGAACGAACACGAACAAAAAATTTAGTTTGGTTAGCTTAGCGAACGAAC
ACAAACAAAGGTCTCGTTTGTTCGACTGCGTTCGTGAACGTTCGGTAATGTATTCGGTTACGTTCGTTCATGTTCGTTTGTTTGATTATATTAGAAAAACAATAAATAATAAACCTTTTA
TCTAAACATATTGAAAACTTGAAACCTTGTTTTTTTTCTAAATTAGTTAAAATTTGGACATTCAAGACATTTTTTGGGATAATTATGTCTAAGTTAGTTAAACGTGATTCATCGTTTGGT
GGTTGTAGTACACTTCTTGTGTTTTGATTTATCATTTGACGGTATTGTATTTAACTACTTATGTCCAATGTTTAATGTTAACAATGTTTTTATCTTTTATTTTCAAGTTAAATATTCGTT
TTTATTCATCGGCGTTCGTCTGTGTTCGAGACCAGTGTTCACGAACAACTGAATTTCCTTGACGAACGAAGACGAACATAAAGTGTTCATGAATAGTTCGCAAACATGTTATTTTTCTTA
ACAAACGAACGCGAACATGGCCTTGTTCGAGTTCTTTCGGTTCGATTACAGCCCTAGGCGGATTGATTGATATTGTGGTCTTTTTTGCAGCTGTTATGGAGAAGCATCGAGCTGGGAAGC
TGGTGCCGTTGCTAACTGAAGCAGGTGCCATTGCGAATACCTCTGCACAGCTCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGAAGCCTGTGGAGCAGAACACAACAACAAACATCCAAAGAAGAAATCGATATGGCTCTTTCCAAAGCTAAGCAAATCGTTTCCGATAATCCCGTCGTCGTCTTCAGCAAGACTTGGT
GTGGATATTGCAAGGGCGTGAAGAAACTGTTCTCCGAGCTTAACGTGTCCTACAAGGTTATCGAACTGGATGAAGAAA
GTGATGGAGGTGAAATCCAATCCGCTCTAAAGGAGTGGACCG
GTCAGAGTACTGTTCCTAATGTGTTTATAGGTGGGAAGCATATTGGTGGCTCGGATG
CTGTTATGGAGAAGCATCGAGCTGGGAAGCTGGTGCCGTTGCTAACTGAAGCAGGTGCCATTG
CGAATACCTCTGCACAGCTCTGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACTTTCTAG ATGAAGTCAG CATCATTCCG TGTAAACGCC AAGTGGCCAT ACACTAAGCA AACGCCGGCT TCATACACAT CTTCTTTTCG GTTGCTTGCA CAATAAGCAC CATTTCTATT  TCTATTCTAG GATTTATAAA TAAATGGGAA GCCTGTGGAG CAGAACACAA CAACAAACAT CCAAAGAAGA AATCGATATG GCTCTTTCCA AAGCTAAGCA AATCGTTTCC GATAATCCCG  TCGTCGTCTT CAGCAAGACT TGGTGTGGAT ATTGCAAGGG CGTGAAGAAA CTGTTCTCCG AGCTTAACGT GTCCTACAAG GTTATCGAAC TGGATGAAGA AAGTGATGGA GGTGAAATCC  AATCCGCTCT AAAGGAGTGG ACCGGTCAGA GTACTGTTCC TAATGTGTTT ATAGGTGGGA AGCATATTGG TGGCTCGGAT GCTGTTATGG AGAAGCATCG AGCTGGGAAG CTGGTGCCGT  TGCTAACTGA AGCAGGTGCC ATTGCGAATA CCTCTGCACA GCTCTGAAGA TTGGTGTCAT GAATAAGATT ATTAAGTTGG TTTAGGAAGA AAAAACAGCG ACTGTCTGTT CTCATTGTGA  TTGTGATGTT TTTAATCATA TGATATGTTA ATAAAATACA ATCTTTAATC ATATGTGATC TGCTGTAACA TCAGAAGTTG TGTTTGTTTA ATTAGGAGTC ATTTTCACCT ACTAAACTTC  TTACTATTTG TTTATTCACG AGTCACTTTC ACTGAACAGA TTTACAAGTA ATTGCAACAG ATTCACATTT AATCTGTTGA AAAAGATGCA ATAGAATCAT GAGATCAGAA GTCTAGTTTT 
AGGTATTTAT 

Retrieve as FASTA