View Redoxidase 14428

Entry information : HaGrxC24HanXRQChr15g0468121

Entry ID	14428
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaGrxC24HanXRQChr15g0468121

Name

HaGrxC24HanXRQChr15g0468121

Class

CGYC Grx [Orthogroup: GrxC003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaGrxC24 start..stop	S start..stop
HaGrxC13	223	5.07e-76	18..164	25..171
ThasGrxC05-2	184	1.87e-60	16..162	39..177
ThasGrxC05-1	180	4.59e-59	63..162	68..167
AtGrxC05	170	4.23e-55	60..162	65..167

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14165369..14165625	255	N° 2	14165187..14165260	72	N° 3	14163861..14163935	73	N° 4	14163434..14163460	25
N° 5	14162975..14163039	63
complement(join(14162975..14163039,14163434..14163460,14163861..14163935,1416518 7..14165260,14165369..14165625))

Literature and cross-references HaGrxC24HanXRQChr15g0468121

DNA ref.	HanXRQ genome: HanXRQChr15 (14165625..14162975)

Protein sequence: HaGrxC24HanXRQChr15g0468121

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	165
PWM (Da):	17906.29	Transmb domain:	i5-22o
PI (pH):	9.66

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAATSVFSRTFSSVSLSHIPNSPSLPFISRNFSHRKTSSRTCLTIRKHGALKVHSMTASFDSRLEDTVKKTVADNPVVVYSKTWCPYSSEVKSLFNQIGVQPLVVELDEGAQGPQVQKVL
EQLTGQHTVPNVFIGGKHIGGCTDTVNLHRKGELEALLAEAKNT

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAGCAACTTCTGTATTCTCTAGAACCTTCTCATCTGTTTCTCTTTCTCACATACCTAACTCCCCTTCTCTTCCGTTCATCTCTCGCAACTTTTCTCATCGCAAAACATCATCACGA
ACATGTTTAACGATCAGGAAACATGGTGCTCTCAAGGTTCACTCCATGACTGCTTCCTTTGACTCTCGGTTAGAAGATACTGTCAAGAAAACAGTCGCTGATAATCCCGTTGTTGTCTAC
TCCAAAACCTGGTGTCCGTAAGTTAATTAGCCTAGGGTTTTATGTTTTTTAATTTATGGTTTGAACTTTGAAGCTTATTATGTTGTTGAAGTGATTTCTTATGTTTTGATTATCGTGTTG
TTAAGGTGTATTCTTCTGAAGTGAAGTCGTTGTTTAATCAGATTGGTGTGCAGCCGCTTGTTGTTGAATTGGATGAAATTGGTGAGGATTTTTTTTATTTTTATTTAATTTGGGGATTTT
TTGGGGGAAGTTGGTAATTCTTTTAGATTGTTAGGGTTACATAAGAGGTGTTTATATAGACATATTTTTGGTACCGAATTTTGGCATTTTTGGTACCCGTACGATATACGGTTCATTACC
GGTATTTGAAGGTTCGGTACCGGTATTTGAAGGTTCAAATACCGGTAATGAACTGTATCGTACTGTGTATTTTCAGGTACCGGTACCCATTTTGGGGATTTTCGGTACCGGGCTCATCCC
TATTTGACGGGATATACCCTGGAATGAGCTATAGCTTGATGAAAACAAGGTCTTGTTGATTAACTGACAAATGAACGGATCCTCCGATGCGTCGTGTTTTGGACAACGGGTTGGTGGATC
AACTCTAGTTACCCAAAAGATCTCGGTCAGCTATATCCAAGTCGAGCCCGGGTGATACGAACCTGGTGCGGGTCAGAACCAATTAATGTGGGTGGCGGGAAAATTGAATGGTGGGGAGCA
GTTAGAAGACCAAGTTTTTAGGAGCAGTTAACACCAGATATTATGTTAAATAGCAGGCTCTGTTTTCCTTTTAGATTGTCTATGTTTATGTTATTAAATTAGGGTTCTTACCTTATAATT
GGAGATCAAGCCTATCTCGAATGTGGCTAATTGTAATCGTTCTCTTAGTAATCAAGGCTTTCAGTTTTTTGGGTTCTATCACCGGGCATCAATAGCCTGACATAACGGTGATCATAAGAT
CGAAGCGCAAAGGAACAAAGGAGTGAGTCGGGTTGGGACTGATGGTGCAGCCGGGCCATAACATACGTTCCGACCACAGACGTAAGATGCGGATGAAGCAGATGTTAAGGCAAGCTGCCA
AGCGTTTAATGCTACGGATTTTGGCAGGGACCAAATCTTTTAGACGTACCAATACCCAGTGGATTAGCTTTACGTCTTTAAACCACTGTGCCACTCCCCTAATTGTTCAGTTATTTGTAA
TTGTAGTCAAGGTTCTTTTGACCAAACCCCACATGTCATATGCTAGTTATCATGATGTTTAGGATCAAATACAAAGGTTCCTAAGAATAAGAAGTCGTACAAAGGGCATCAAATGGACTC
CGATTGACCTCATTCAAGCAGTGGAACTGTCTCATATATGTAGTTAAAGCTGCAATATCTGTGAATAAGTTGTTAGGAACTTAGGGTTTGTAAACACTGCCGAAGGTCACTTTTTAATTT
TTTTTATTTCAGGTGTGCGCAAGGACCACAGGTACAGAAAGTTCTTGAACAGCTAACTGGACAACATACCGTTCCAAATGTTTTTATTGGTATGTAGACTATGCATTAAGAATGTCATAT
ATTTTTTCACTTGATACTTAGCATGGTATAATTTAATTGAACTGATCTCGATCATAAGCAGTTAGCCGCGTACTGCATAGATTTCTAATCATAAGCACCCAACGTGCGTGATATAGAATG
TACTTTCGACTCCTTTAGTATAAGTGGGCCTAGTTGAGTTATGTTTTATCTCAAACGTGTCGAATGGGTTGTAAGTCACAGTGTCTCACAAAGTGTAAAAGGTAATGGAAGGGTCCGCAC
TCACGGTGTGACTATTGCTGAAAGTGCTGACCTTCCATCTTCTTTTACAATATCAACAACACTAAAGAAGAAACTATGAAATAAAAAATAAACATAATTTCTGAGCTCATTTATCGTTTT
TTCTAACAGGGGGGGCAAGCACATAGGCGGTTGTACAGGTACCTTCTTTACCAGTTCCTTTAGCTCATTCTTCTCGTATGTGGATTCTGATTTGGGTTACATTTAATAATATATTAGTAC
TTTCTTACACCGGTTTTGTATAAACAAGTCGGGTTGGTGGAACACGTAATGGGCCAAAACTGCTATGGTTTAGTATGTATTCTGTTGACCTGATACACTTGTTGACCTTTTCCGATTTTT
ATACATAAATAATGTTACGACTACAAAATTATATTATTATTGAGATAGTCTAATCGTAAGATAAAGCGATTTAGGAGGTTGTATACTTGTATCATTAATTAAAGACACTTGGGTTAACTT
ACGTCCCGTTTCCCTTTAAAGTAAATTGTTTTCGGATGTTTTTGTATAATGTTGATTTGTGATTTGGCGCAGATATACTGTCAATTTACATAGGAAGGGGGAACTTGAAGCTTTGCTGGC
TGAGGCGAAAAACACCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTGTATAC ATAAACACGA AACACAGAGG ACCAAAGGAG CAAGCAAGCA TCAATGGCAG CAACTTCTGT ATTCTCTAGA ACCTTCTCAT CTGTTTCTCT TTCTCACATA CCTAACTCCC CTTCTCTTCC GTTCATCTCT CGCAACTTTT CTCATCGCAA AACATCATCA CGAACATGTT TAACGATCAG GAAACATGGT GCTCTCAAGG TTCACTCCAT GACTGCTTCC TTTGACTCTC GGTTAGAAGA TACTGTCAAG AAAACAGTCG CTGATAATCC CGTTGTTGTC TACTCCAAAA CCTGGTGTCC GTATTCTTCT GAAGTGAAGT CGTTGTTTAA TCAGATTGGT GTGCAGCCGC TTGTTGTTGA ATTGGATGAA ATTGGTGCGC AAGGACCACA GGTACAGAAA GTTCTTGAAC AGCTAACTGG ACAACATACC GTTCCAAATG TTTTTATTGG GGGCAAGCAC ATAGGCGGTT GTACAGATAC TGTCAATTTA CATAGGAAGG GGGAACTTGA AGCTTTGCTG GCTGAGGCGA AAAACACCTA ACTCGATATT GCTCAACTGT TTTGATGCAC AACCTTATTT TCTGAATTGT TGTGATGCAC AAAAAATGAT ATATATTTTT TTGCTGTTTT GTTGGCCAAA CTTGACTAAT TTTGATGTAA TCTTGTTGAT CTTGTGATAT AACTGGATTA AAAGGATGAG TAGCATGCTA AATTGCTAAT GACATCTCAT GTGCATGAGT AGAGATTAGA AAAACCGAAT AACATAACTA GGGGTGTAAA CGAGCTAGAC TGAGCTCTCC ACTAGAAAAA CTGAATAAAA TAACTCGAGG
GTGTAAATGA

Retrieve as FASTA