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Entry information : HaAPR01HanXRQChr05g0129431
Entry ID 14479
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaAPR01HanXRQChr05g0129431
Name HaAPR01HanXRQChr05g0129431
Class Thioredoxin Type APR    [Orthogroup: APR001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaAPR01
start..stop		 S start..stop
HaAPR02 848 0 1..463 1..461
HaAPR03 757 0 1..463 42..507
AtAPR03 718 0 33..463 32..458
ThasAPR03 715 0 14..463 20..466
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2208479..2208554 74 N° 2 2208214..2208378 163 N° 3 2207789..2207918 128 N° 4 2206902..2207691 788
N° 5 2206582..2206812 229  
complement(join(2206582..2206812,2206902..2207691,2207789..2207918,2208214..2208 378,2208479..2208554))


exon

Literature and cross-references HaAPR01HanXRQChr05g0129431
DNA ref. HanXRQ genome:   HanXRQChr05 (2208554..2206582)
Protein sequence: HaAPR01HanXRQChr05g0129431
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   463
PWM (Da):   %s   51306.89  
PI (pH):   %s   6.21
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALAFTASTSASIAFSSSNSRTEQQGIQFSASNLQTLDRSFPSPAALNLSRKRSEAVKALNAEPKRNDSIVPSAATVFAPDVVDKSIEVEDIEKLAQDLEKASPLEIMDKALEKYGNDIA
IAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYKFFDTVEKHYGIRIEYMFPDAVEVQALVRTKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEVPVVQ
VDPVFEGMDGGSGSLVKWNPVANVAGNDIWNFLRTMEVPVNTLHAQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNLKEENVNGNGSVNGNASSDIFESQNIVNLSRPG
IENLLKMEDRKDGWMVVLYAPWCPFCAMEASYEELADKLAGSGVKVGKFRADGEQKTFAKQELQLGSFPTILFFPKHSSRPIKYASEKRDVDSLMAFINALR*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTGGCTTTTACTGCTTCTACTTCTGCTTCAATTGCATTTTCCTCTTCTAATTCTCGTACAGAACAACAAGGTATATTCATTGATTTTACCCTTGTATTTACTGTTTCTGTTTCC
TAATTTTTTGATAGTGTTTTGAATTGCAATGTTTCTTATTTAATTTATGATTGCAGGGGGATTCAGTTTAGTGCAAGCAATTTGCAAACTTTAGATCGATCTTTTCCGTCACCGGCGGCT
CTTAATTTATCCCGGAAACGATCTGAGGCTGTGAAGGCTTTGAATGCTGAACCCAAGAGGAATGATTCTATCGTTCCTTCTGCTGCCACTGTGTTTGCTCCCGGTATGATTATTATTACT
TTTCTAGGGTTTATAAATCAACCATGCAATCAGGATCAATTAGGGGCATTTTAGTCGTTTTATAGGATTAATTTATTTTATTATGCCCTTTTATATAATCCAGGGTTCATGTTAATCAAT
AATCATAGTACTAGGTTAAGGTTTACTCACTGGTGAGAAAATTTTGACTTTTTAAGGTCAAGTATTTGAAAATTAAAATTGCTAAAATGTTACTGGTTTTTTTACAAGTAACTTAGGGTG
TGTGTCATAATTGCTTATTGTGTTGGTTAATTATACAGATATGTAGTGGACAAATCAATAGAGGTTGAGGACATTGAGAAATTGGCTCAGGATCTTGAGAAGGCTTCCCCACTTGAAATC
ATGGATAAAGCCCTTGAAAAATATGGGAATGATATTGCTATAGCTTTCAGGTAATCCAACACTACAACTTGTTTCTGCACGATTTAAAACTAGCTTATGATTGTTGTAATACAATCTTAA
CATCCCAAAATTGTGCCTTGATTCCAGTGTGGTGCAGAAGATGTTGCTTTGATAGAGTATGCTCACTTGACCGGACGCCCGTTCAGGGTTTTTAGCCTTGACACCGGGAGGCTAAACCCG
GAAACGTACAAATTCTTTGATACCGTTGAGAAACACTATGGCATCCGGATTGAGTACATGTTCCCGGATGCTGTGGAAGTACAAGCCTTGGTTAGAACCAAGGGTCTTTTCTCATTTTAT
GAAGACGGTCATCAGGAATGTTGCCGTGTGCGAAAGGTGCGACCTTTGAGGCGGGCTTTGAAGGGTTTGCGGGCTTGGATCACGGGTCAGAGAAAAGACCAGTCTCCAGGGACTAGGTCC
GAAGTTCCAGTGGTTCAGGTGGATCCGGTTTTTGAAGGGATGGATGGTGGGTCGGGAAGCTTGGTGAAGTGGAACCCTGTTGCTAATGTAGCTGGTAACGATATATGGAACTTCCTCCGA
ACCATGGAGGTACCGGTTAACACGCTGCATGCTCAGGGGTACATCTCAATAGGGTGCGAGCCGTGCACGAGGCCGGTCTTGCCCGGTCAACACGAGAGGGAAGGAAGGTGGTGGTGGGAG
GATGCCAAAGCTAAAGAATGCGGGCTGCATAAAGGAAACCTTAAAGAGGAAAACGTAAATGGGAATGGTTCGGTGAATGGTAATGCGAGTTCTGATATCTTTGAGAGCCAAAACATTGTG
AACTTGAGCCGGCCTGGTATTGAGAATCTTCTGAAGATGGAAGACCGAAAAGACGGTTGGATGGTTGTTCTTTATGCACCCTGGTGCCCCTTCTGTCAGGTAATGAACACGATCATGGTT
ATACTATATGCATCGATTTAATGTACTTTACACATTGTCATAGTGTTAAACGTTCATTGTGTTTGCAGGCGCAATGGAAGCATCGTATGAGGAACTGGCTGATAAGTTAGCTGGAAGTGG
TGTAAAGGTTGGGAAATTTAGAGCCGACGGTGAGCAGAAGACGTTCGCGAAACAAGAATTGCAGCTTGGGAGCTTCCCGACGATCCTTTTCTTCCCGAAGCACTCGTCAAGGCCTATTAA
GTATGCGTCCGAGAAGAGAGATGTTGACTCTTTGATGGCTTTCATTAACGCCCTTAGATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTGGCTTTTACTGCTTCTACTTCTGCTTCAATTGCATTTTCCTCTTCTAATTCTCGTACAGAACAACAAGGGATTCAGTTTAGTGCAAGCAATTTGCAAACTTTAGATCGATCT
TTTCCGTCACCGGCGGCTCTTAATTTATCCCGGAAACGATCTGAGGCTGTGAAGGCTTTGAATGCTGAACCCAAGAGGAATGATTCTATCGTTCCTTCTGCTGCCACTGTGTTTGCTCCC
GATGTAGTGGACAAATCAATAGAGGTTGAGGACATTGAGAAATTGGCTCAGGATCTTGAGAAGGCTTCCCCACTTGAAATCATGGATAAAGCCCTTGAAAAATATGGGAATGATATTGCT
ATAGCTTTCAGTGGTGCAGAAGATGTTGCTTTGATAGAGTATGCTCACTTGACCGGACGCCCGTTCAGGGTTTTTAGCCTTGACACCGGGAGGCTAAACCCGGAAACGTACAAATTCTTT
GATACCGTTGAGAAACACTATGGCATCCGGATTGAGTACATGTTCCCGGATGCTGTGGAAGTACAAGCCTTGGTTAGAACCAAGGGTCTTTTCTCATTTTATGAAGACGGTCATCAGGAA
TGTTGCCGTGTGCGAAAGGTGCGACCTTTGAGGCGGGCTTTGAAGGGTTTGCGGGCTTGGATCACGGGTCAGAGAAAAGACCAGTCTCCAGGGACTAGGTCCGAAGTTCCAGTGGTTCAG
GTGGATCCGGTTTTTGAAGGGATGGATGGTGGGTCGGGAAGCTTGGTGAAGTGGAACCCTGTTGCTAATGTAGCTGGTAACGATATATGGAACTTCCTCCGAACCATGGAGGTACCGGTT
AACACGCTGCATGCTCAGGGGTACATCTCAATAGGGTGCGAGCCGTGCACGAGGCCGGTCTTGCCCGGTCAACACGAGAGGGAAGGAAGGTGGTGGTGGGAGGATGCCAAAGCTAAAGAA
TGCGGGCTGCATAAAGGAAACCTTAAAGAGGAAAACGTAAATGGGAATGGTTCGGTGAATGGTAATGCGAGTTCTGATATCTTTGAGAGCCAAAACATTGTGAACTTGAGCCGGCCTGGT
ATTGAGAATCTTCTGAAGATGGAAGACCGAAAAGACGGTTGGATGGTTGTTCTTTATGCACCCTGGTGCCCCTTCTGTCAGGCAATGGAAGCATCGTATGAGGAACTGGCTGATAAGTTA
GCTGGAAGTGGTGTAAAGGTTGGGAAATTTAGAGCCGACGGTGAGCAGAAGACGTTCGCGAAACAAGAATTGCAGCTTGGGAGCTTCCCGACGATCCTTTTCTTCCCGAAGCACTCGTCA
AGGCCTATTAAGTATGCGTCCGAGAAGAGAGATGTTGACTCTTTGATGGCTTTCATTAACGCCCTTAGATGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCATCCTTTT TCTTCTCATA AATTCCCCCA ACTTCCTTCC TTCCATCCTC AAATTCACAA TTCTCAATTT GTTTACATCT CCTTTCAACC TTCATCATCA ATGGCGTTGG CTTTTACTGC  TTCTACTTCT GCTTCAATTG CATTTTCCTC TTCTAATTCT CGTACAGAAC AACAAGGGAT TCAGTTTAGT GCAAGCAATT TGCAAACTTT AGATCGATCT TTTCCGTCAC CGGCGGCTCT  TAATTTATCC CGGAAACGAT CTGAGGCTGT GAAGGCTTTG AATGCTGAAC CCAAGAGGAA TGATTCTATC GTTCCTTCTG CTGCCACTGT GTTTGCTCCC GATGTAGTGG ACAAATCAAT  AGAGGTTGAG GACATTGAGA AATTGGCTCA GGATCTTGAG AAGGCTTCCC CACTTGAAAT CATGGATAAA GCCCTTGAAA AATATGGGAA TGATATTGCT ATAGCTTTCA GTGGTGCAGA  AGATGTTGCT TTGATAGAGT ATGCTCACTT GACCGGACGC CCGTTCAGGG TTTTTAGCCT TGACACCGGG AGGCTAAACC CGGAAACGTA CAAATTCTTT GATACCGTTG AGAAACACTA  TGGCATCCGG ATTGAGTACA TGTTCCCGGA TGCTGTGGAA GTACAAGCCT TGGTTAGAAC CAAGGGTCTT TTCTCATTTT ATGAAGACGG TCATCAGGAA TGTTGCCGTG TGCGAAAGGT  GCGACCTTTG AGGCGGGCTT TGAAGGGTTT GCGGGCTTGG ATCACGGGTC AGAGAAAAGA CCAGTCTCCA GGGACTAGGT CCGAAGTTCC AGTGGTTCAG GTGGATCCGG TTTTTGAAGG  GATGGATGGT GGGTCGGGAA GCTTGGTGAA GTGGAACCCT GTTGCTAATG TAGCTGGTAA CGATATATGG AACTTCCTCC GAACCATGGA GGTACCGGTT AACACGCTGC ATGCTCAGGG  GTACATCTCA ATAGGGTGCG AGCCGTGCAC GAGGCCGGTC TTGCCCGGTC AACACGAGAG GGAAGGAAGG TGGTGGTGGG AGGATGCCAA AGCTAAAGAA TGCGGGCTGC ATAAAGGAAA  CCTTAAAGAG GAAAACGTAA ATGGGAATGG TTCGGTGAAT GGTAATGCGA GTTCTGATAT CTTTGAGAGC CAAAACATTG TGAACTTGAG CCGGCCTGGT ATTGAGAATC TTCTGAAGAT  GGAAGACCGA AAAGACGGTT GGATGGTTGT TCTTTATGCA CCCTGGTGCC CCTTCTGTCA GGCAATGGAA GCATCGTATG AGGAACTGGC TGATAAGTTA GCTGGAAGTG GTGTAAAGGT  TGGGAAATTT AGAGCCGACG GTGAGCAGAA GACGTTCGCG AAACAAGAAT TGCAGCTTGG GAGCTTCCCG ACGATCCTTT TCTTCCCGAA GCACTCGTCA AGGCCTATTA AGTATGCGTC  CGAGAAGAGA GATGTTGACT CTTTGATGGC TTTCATTAAC GCCCTTAGAT GATGAAGAAA ACTAGAAAAG TGTGTTGTTT ATGCGCATGT ACAACTTGAT GCACGGTTTT GGTTTTGGTC  TTGGTCATTG TATAATATCC GGTATAGAAT GTAGTCCCAG TTTTGGTCTT GTGTTTGATG CAAGTTTGTT TTGTTGAGTA TTATAAGAAA CAAACATTTT TTTCTCTTAA ACATCACCTC 
AATAGAATTT GATTCTGTTT CTCTCTCATA CGCTCCTCCT CTCCTAACAT TTTT 

Retrieve as FASTA