View Redoxidase 14484

Entry information : HaLilium02HanXRQChr05g0156071

Entry ID	14484
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaLilium02HanXRQChr05g0156071

Name

HaLilium02HanXRQChr05g0156071

Class

Thioredoxin Type Lilium [Orthogroup: Lilium004]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaLilium02 start..stop	S start..stop
ThasLilium03-2	235	5.96e-78	30..243	42..245
HaLilium05	231	4.57e-76	12..218	19..233
AtLilium03	229	8.1e-76	65..219	68..222
HaLilium01	229	1.51e-75	63..218	77..232

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14484' 'join(192028816..192029001,192029112..192029294,192029385..192029549,192030252..192030452)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	192028816..192029001	184	N° 2	192029112..192029294	181	N° 3	192029385..192029549	163	N° 4	192030252..192030452	199
join(192028816..192029001,192029112..192029294,192029385..192029549,192030252..1 92030452)

Literature and cross-references HaLilium02HanXRQChr05g0156071

DNA ref.	HanXRQ genome: HanXRQChr05 (192028816..192030452)

Protein sequence: HaLilium02HanXRQChr05g0156071

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	244 (779)
PWM (Da):	26831.7 (82537.3)
PI (pH):	8.55 (4.69)	Peptide Signal:	cut: 19 range:19-797

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASSLNSIILPGYLTSFKETLINPNGSLSSSVFPTDLTQRSQLFS
DHKGLTSSSWNAKTPVLAHASICVSKSMRWWEKTLKPNMIEINSAQEFVDTLSNSGDRLVIVDFYSPGCGGCKALYPKICQLAESNPKAIFLQVNYEELKPMCQSLHIHVLPFFRFYKGHEGKICSFSCTVATIKKF
KDALSKYKPDGCNLGPAKGLEESELLTLASIGQISYNLPLKSTEVDLDPKKMNPSSKNLLLA*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCTTCATTAAACTCCATTATTTTGCCTGGTTATTTGACTTCTTTTAAAGAAACTTTAATAAACCCAAATGGGTCTCTTTCTTCTTCAGTTTTCCCCACTGATTTGACCCAAAGA
TCACAGCTTTTTTCAGATCACAAGGGTTTAACTTCAAGTTCTTGGAATGCCAAAACCCCTGTTCTTTTGTATGTTAAATATTATCATTTTTTTTCTTTTGTGAAATGGGGTTTGTGTTTA
AAGTTTTAAACATTATTTTGATTTCTGATAGAAATTTTCTATTTTCATGACTATACAGGCACATGCTTCAATATGTGTTAGCAAATCAATGAGATGGTGGGAAAAGACATTAAAGCCCAA
CATGATTGAGATCAATTCAGCCCAAGAGTTTGTGGATACACTATCAAATTCAGGGGATAGATTGGTCATTGTGGACTTTTATTCACCTGGTTGTGGTGGTTGTAAAGCTCTATATCCCAA
GAGGTATGAACTATTTAAAATCCTATCTTTTTTTTTTTCTCAAGATTTTAGTGATTATTTTTTTAATTGATTTATTTTTGGGTTTATAATCAGATCTGTCAATTAGCTGAGTCAAACCCT
AAAGCAATTTTCCTCCAAGTGAACTATGAAGAACTCAAACCCATGTGTCAATCTCTCCATATTCATGTTCTGCCATTTTTTAGATTCTACAAAGGTCATGAGGGCAAGATTTGCAGCTTT
AGCTGCACTGTTGCAACTCTGTAAGTTTTTTTTTTTTTTTTTTTTCATTTTAATTTTGAATGCAATGTTGAAATGCTTAGACTTGAGCTATATTAAATTAAATGTCAAAAAAAAAAAAAA
AAGATTTTCAAGGTTGAATGGATCAATTGGGCAAACATTAGTTGTAAACTTGTAATGTATACAAGCTTTTGAATTTGTTAATTGAAAAGAATAAGATTATAAGTACAATAATAGATTTTT
TTATTGTCATATTGGATATATTTATAATTTATAATTTTTTATATAATTTAAGACAGTTAAAAAGTTGTGGGTTCAGTGGCGAAGCTTGAGATTTCCGACCGGTGGTCGAAAACGTATATA
CACACAAATTTCTATAAAACCGGGGGGTCAAAAACTTGTATACCTAAAAATTTCTATACGAAAACTATATATTTTTCACCACTGAGAGAAAAGTTCGGGGGGTCGGTCCCCCTCCCACCC
CTACTATGCTACGCCCATGCGTGGGTTGATTCATCCCATGTTAACTGAGGAGGTTAATGGGCCGGGTATTGGTAATCTTGTCAGATTGGTAATCCTGTCGGGCTTATCCATCGACTGGTC
CCATACCCGAACACCCTATTTATCCAAACCTTTTTTGTTTTAATATGTTAATGATACCTCTAATTTCTGTTATCCAAAAAGAATGATGACAAAAGTTAACAAGAATAATTGGTTAATGGC
AGATCAAGAAATTCAAGGATGCATTATCAAAGTACAAGCCAGATGGATGTAATCTTGGTCCAGCTAAAGGATTAGAAGAGTCTGAGCTGTTGACTTTAGCTTCAATTGGTCAAATTTCTT
ATAATTTGCCATTAAAGTCAACTGAGGTTGATTTGGATCCTAAGAAAATGAACCCATCCAGCAAGAATTTGCTTCTTGCATAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GGTTCACAAC TATTTTGTGA GTGGATAAAG TTGAATTTAA TGAAACTGAA AACCCTACAT AAAACCAAAA AAAGATCCCA CCAAACCTGT TACTTTTCCT TTTCCCAAAA CCTTCATCCA CACTTCTCTC TCATCAAAGG AACACATCTT TTGTTGGTTT TTTGGTCTTC TTGCACCAAG TTATGTTATT TGGATTCTTG TTAACTGGAT TACATAAAAC CTCAATTGGT CTTTTGTCTT GCTTCACATC ATACTAACAA AAAAAGGGTT CTTGCCTTCT TGGTGCATTC TTCAATCTTT TATCTTTAAC ATCTCTCCAA TGGCTTCTTC ATTAAACTCC ATTATTTTGC CTGGTTATTT GACTTCTTTT AAAGAAACTT TAATAAACCC AAATGGGTCT CTTTCTTCTT CAGTTTTCCC CACTGATTTG ACCCAAAGAT CACAGCTTTT TTCAGATCAC AAGGGTTTAA CTTCAAGTTC TTGGAATGCC AAAACCCCTG TTCTTGCACA TGCTTCAATA TGTGTTAGCA AATCAATGAG ATGGTGGGAA AAGACATTAA AGCCCAACAT GATTGAGATC AATTCAGCCC AAGAGTTTGT GGATACACTA TCAAATTCAG GGGATAGATT GGTCATTGTG GACTTTTATT CACCTGGTTG TGGTGGTTGT AAAGCTCTAT ATCCCAAGAT CTGTCAATTA GCTGAGTCAA ACCCTAAAGC AATTTTCCTC CAAGTGAACT ATGAAGAACT CAAACCCATG TGTCAATCTC TCCATATTCA TGTTCTGCCA TTTTTTAGAT TCTACAAAGG TCATGAGGGC AAGATTTGCA GCTTTAGCTG CACTGTTGCA ACTATCAAGA AATTCAAGGA TGCATTATCA AAGTACAAGC CAGATGGATG TAATCTTGGT CCAGCTAAAG GATTAGAAGA GTCTGAGCTG TTGACTTTAG CTTCAATTGG TCAAATTTCT TATAATTTGC CATTAAAGTC AACTGAGGTT GATTTGGATC CTAAGAAAAT GAACCCATCC AGCAAGAATT TGCTTCTTGC ATAGGTTTTA GATGCTAGTT TGAAAACAGT GTCTTTGCAA GAATTTACTT GTTTAGGTTT TAGATTAATC TATCCGAACC CTAATGGGTC GGGTCGGTGG GCATTTAAGT GGGCTTGCTA TATTTTTAGT TGATGGACAA GCCCTACTTG TTTGATGTTT GTTCAGTTTA TTATTGAAGA TTGTAATTTG TGATTGACTA GACCCGTGCG TGTTGCGGCG CGGGTACATC ATAAACATCG AATCGATTAG TTCAATCGTT ATGCGATGCG TTAACCATAT GAAAACACGT ATTTCGACGT ATTCAATTGA ACTCAATGCA ACCTATATAA GCATTGCGAT TGTATCAAAA TGTAAAGTAA ATCGAGTTTA TAACGTACAA TCATAACGTA TTATATGTGA CCCAACTCGT ACATAGAAAA TGTAACGGGT ATAAAAGGAA AAACTGCCAC GTGTAATCAA AAGCGATTAA TTAGAGCTTT TGAATCAAAA AACCACAACT TAACTCCACT
CGGTTCGAAA CAAAATTTCG TAACATTCAT AAAATAGGCA TAAAAATATA TTATATATGA CCTGACTCGT TTCCTAAAAA AGTTTAGGTC GAATCGTTGA CCAATTCTAA TTTATACCA

Retrieve as FASTA