Entry information : HaLilium05HanXRQChr13g0397771
Entry ID 14487
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaLilium05HanXRQChr13g0397771
Name HaLilium05HanXRQChr13g0397771
Class Thioredoxin Type Lilium    [Orthogroup: Lilium002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaLilium05
start..stop
S start..stop
HaLilium01 412 1.24e-146 1..295 1..290
ThasLilium01-2 290 8.79e-99 43..295 40..283
ThasLilium01-1 289 2.36e-98 51..239 48..236
AtLilium01 271 7.82e-93 99..295 1..177
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14487' 'join(76983409..76983642,76984033..76984212,76984280..76984444,76984833..76985141)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 76983409..76983642 232 N° 2 76984033..76984212 178 N° 3 76984280..76984444 163 N° 4 76984833..76985141 307
join(76983409..76983642,76984033..76984212,76984280..76984444,76984833..76985141 )


exon

Literature and cross-references HaLilium05HanXRQChr13g0397771
DNA ref. HanXRQ genome:   HanXRQChr13 (76983409..76985141)
Protein sequence: HaLilium05HanXRQChr13g0397771
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   295
PWM (Da):   %s   31970.15  
PI (pH):   %s   8.66
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKIISNGYKFPACNHGFGYNKFDSFSHVMVKMPVFSTSGSNLTLRMSADADFFDRRAALGGQGRRVLTQVAAASDSKMGIIGIGKSLKWWEKGLQPNMKEITGAEDLVESLSKAGDQLV
IVDFFSPGCGGCRALHPK
LCQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGDEGRLCSFSCTNATIKKFKDALAKHKPDRSSVGPAKGLEEKELVALGANRDLSFAYNPQPE
NPQKEVAPPPLLPVPTVATGGSGSQSLPLPLPIPLKSTSESKEDNKDKTLVSSGR*

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGATCATAAGTAATGGTTATAAGTTTCCTGCTTGTAATCATGGTTTTGGTTACAATAAGTTTGATAGTTTTTCTCATGTTATGGTAAAGATGCCGGTTTTTTCGACTTCCGGA
TCGAATTTGACCCTTCGGATGTCGGCCGACGCCGATTTTTTCGATCGGCGTGCGGCTTTAGGTGGTCAAGGCAGAAGGGTTCTGACACAAGTAGCTGCAGCTTCTGATTCTAAG
AGGTCT
GTTTTTATTATTTTCATTTTTTTTATTTTCTTAATTCAATTACATTATTAAGCAATTTGTTTTGAAATTCAAATTGGGTGTCTTCAAGATTTGTTTTTTTTTTTTGGTTTGGTTTATGCA
TATGAATTAATTAAAAAATATCTTTTTTCAACAAGAAATATGAGAACTTGATGTTTTACTTTTACCCAGATATAAATTACTACAAAATAGGTAAATTATTGTTTTACCGTGTTAAGAAAA
CCAGAAAAACAACAAATGTTAGGAATCAGATCTTGATTTTAAATATCTTGCAAGAAAAAGCATAAATCTTGAAATATATATAACAAGCAATCAAATTAACTATACAGATACTATGTTGTT
GATATCTTGAAATTGTGATTAAACAGATGGGTATTATTGGCATTGGAAAATCTTTAAAATGGTGGGAAAAAGGGCTTCAACCAAACATGAAGGAAATAACCGGTGCAGAAGATCTCGTTG
AATCGCTGTCAAAAGCCGGCGATCAACTAGTCATTGTCGATTTCTTCTCACCTGGTTGTGGTGGCTGCAGAGCTCTTCACCCCAAG
AGGTATGTATGTCATTTGTCGAGCTTTCGTTAAA
GACCTTTTTTTAATCTTTTTTCTTTGATTTTGCAGTTATGTCAATTAGCAGAGATGAATCCTGATGTCCAGTTTTTGCAAGTGAACTATGAGGAGCACAAATCCATGTGTTATAGCCTCA
ATGTTCATGTTCTTCCATTCTTTCGGTTTTATAGAGGGGATGAGGGTCGTCTTTGTAGCTTTAGTTGTACCAATGCTACG
CGGTTCGTGCCAATTTTATTATTTCTTGTTTATTTTAGTA
AGGGTAAATTGCATTTTACGTCATTTAAGTTTCAGCAAAATTTCAGGTGCAGTTTCTTTAACTAACGAAATTACAGCGGATGTCCTTTATGTTCTAATTTCCTTACAGTAGATGTCCTTT
ATGTTTTAATTTCTTTATAGCGGATGTCTTTTATTTTTGTAATATTTTTACGGAGAAAGGATTGCGCCTGTAAAAAAAAAATAGAACATAAAGGACATTCGCTGTAATTTCGTTAGTTAA
AGGACAACGCTTGAAATTTTGCGGAAACTTAAAGGACGTAAAATGCAATTTACCCTTTTAGTAACGTTATAAACGATGATTGTTTGAACTCGAGTACAATGATGATACAGATCAAGAAGT
TTAAAGATGCATTGGCGAAACACAAGCCCGACCGAAGCAGTGTAGGCCCAGCGAAAGGTCTCGAGGAGAAAGAGTTGGTGGCACTCGGGGCCAATCGGGACCTTTCTTTTGCGTATAATC
CACAACCGGAGAACCCGCAAAAGGAGGTTGCACCACCACCATTGCTGCCAGTGCCAACGGTGGCAACAGGGGGTTCAGGTTCACAAAGCCTGCCTCTTCCTCTTCCGATTCCCTTGAAGT
CAACATCGGAATCGAAAGAAGATAATAAAGATAAAACATTGGTGTCTTCTGGGAGATGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGATCATAAGTAATGGTTATAAGTTTCCTGCTTGTAATCATGGTTTTGGTTACAATAAGTTTGATAGTTTTTCTCATGTTATGGTAAAGATGCCGGTTTTTTCGACTTCCGGA
TCGAATTTGACCCTTCGGATGTCGGCCGACGCCGATTTTTTCGATCGGCGTGCGGCTTTAGGTGGTCAAGGCAGAAGGGTTCTGACACAAGTAGCTGCAGCTTCTGATTCTAAG
ATGGGT
ATTATTGGCATTGGAAAATCTTTAAAATGGTGGGAAAAAGGGCTTCAACCAAACATGAAGGAAATAACCGGTGCAGAAGATCTCGTTGAATCGCTGTCAAAAGCCGGCGATCAACTAGTC
ATTGTCGATTTCTTCTCACCTGGTTGTGGTGGCTGCAGAGCTCTTCACCCCAAG
TTATGTCAATTAGCAGAGATGAATCCTGATGTCCAGTTTTTGCAAGTGAACTATGAGGAGCACAAA
TCCATGTGTTATAGCCTCAATGTTCATGTTCTTCCATTCTTTCGGTTTTATAGAGGGGATGAGGGTCGTCTTTGTAGCTTTAGTTGTACCAATGCTACG
ATCAAGAAGTTTAAAGATGCA
TTGGCGAAACACAAGCCCGACCGAAGCAGTGTAGGCCCAGCGAAAGGTCTCGAGGAGAAAGAGTTGGTGGCACTCGGGGCCAATCGGGACCTTTCTTTTGCGTATAATCCACAACCGGAG
AACCCGCAAAAGGAGGTTGCACCACCACCATTGCTGCCAGTGCCAACGGTGGCAACAGGGGGTTCAGGTTCACAAAGCCTGCCTCTTCCTCTTCCGATTCCCTTGAAGTCAACATCGGAA
TCGAAAGAAGATAATAAAGATAAAACATTGGTGTCTTCTGGGAGATGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCTGATTCGT GTATGACTAG GAAAAGCATA GTCCAGAAAA AAATGAAATT AATCCATAAT GAAAAAATAA TGACCCCACA ATTTCTTCAA TCTCAATTTC AAAACCACTT TAAGTCTTAC  ACGTATACAA TGAAATTGCA CAATAAGCAA TCCCAATTGC CCCTTTTATT GGCTTTGACT TGAAGCAATC CAAAAACCCT GAATTAAATC TCATTCATCT TTGATCTTAC AAAAACTAAA  AAACCCATTT TTCTTCAATC AAATTGAATT AGGGAAATAT TGTCATATTG AAATAATCAT GGCTAAGATC ATAAGTAATG GTTATAAGTT TCCTGCTTGT AATCATGGTT TTGGTTACAA  TAAGTTTGAT AGTTTTTCTC ATGTTATGGT AAAGATGCCG GTTTTTTCGA CTTCCGGATC GAATTTGACC CTTCGGATGT CGGCCGACGC CGATTTTTTC GATCGGCGTG CGGCTTTAGG  TGGTCAAGGC AGAAGGGTTC TGACACAAGT AGCTGCAGCT TCTGATTCTA AGATGGGTAT TATTGGCATT GGAAAATCTT TAAAATGGTG GGAAAAAGGG CTTCAACCAA ACATGAAGGA  AATAACCGGT GCAGAAGATC TCGTTGAATC GCTGTCAAAA GCCGGCGATC AACTAGTCAT TGTCGATTTC TTCTCACCTG GTTGTGGTGG CTGCAGAGCT CTTCACCCCA AGTTATGTCA  ATTAGCAGAG ATGAATCCTG ATGTCCAGTT TTTGCAAGTG AACTATGAGG AGCACAAATC CATGTGTTAT AGCCTCAATG TTCATGTTCT TCCATTCTTT CGGTTTTATA GAGGGGATGA  GGGTCGTCTT TGTAGCTTTA GTTGTACCAA TGCTACGATC AAGAAGTTTA AAGATGCATT GGCGAAACAC AAGCCCGACC GAAGCAGTGT AGGCCCAGCG AAAGGTCTCG AGGAGAAAGA  GTTGGTGGCA CTCGGGGCCA ATCGGGACCT TTCTTTTGCG TATAATCCAC AACCGGAGAA CCCGCAAAAG GAGGTTGCAC CACCACCATT GCTGCCAGTG CCAACGGTGG CAACAGGGGG  TTCAGGTTCA CAAAGCCTGC CTCTTCCTCT TCCGATTCCC TTGAAGTCAA CATCGGAATC GAAAGAAGAT AATAAAGATA AAACATTGGT GTCTTCTGGG AGATGAGTTT TATCATAAGT  ATTTCGTATG TTATATTTTA GTGTTTTTGT ACTATTTTTG TGGATGTGTA AATAGTACAA TGGTCTAGCC CAAGTGTGTG CACATCTGTA TGCCCATTTT ATTGTGGCAT TCAGAAGCTT 
AAATTTGAAA TTTCTGTCTA ATAAGAGGGT GATTTTGTTT TACACATTGG CTTTTTTTTT TTTTTT 

Retrieve as FASTA