Entry information : HaTrxH01 (HanXRQChr01g0000531)
Entry ID 14497
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaTrxH01 (HanXRQChr01g0000531)
Name (synonym) HaTrxH01 (HanXRQChr01g0000531)
Class Thioredoxin Type H    [Orthogroup: TrxH001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrxH01
start..stop
S start..stop
HaTrxH05 204 2e-69 1..135 1..134
ThasTrxH09-1 197 8e-67 1..135 1..134
ThasTrxH09-2 199 3e-66 1..133 100..231
HaTrxH06 196 4e-66 1..139 1..139
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2045920..2045940 21 N° 2 2047645..2047767 123 N° 3 2047861..2047983 123 N° 4 2048058..2048210 153
join(2045920..2045940,2047645..2047767,2047861..2047983,2048058..2048210)


exon

Literature and cross-references HaTrxH01 (HanXRQChr01g0000531)
DNA ref. HanXRQ genome:   HanXRQChr01 (2045920..2048210)
Protein sequence: HaTrxH01 (HanXRQChr01g0000531)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   139
PWM (Da):   %s   15204.55  
PI (pH):   %s   4.87
Sequence 180
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGHCFSSPRADEDETNSHAQLAGGNVTLITTKNAWDQKLAEAKTQGKIVIGNFSATWCGPCKSMAPYYIELSEKYPSLMFLTVDVDELTDFSTQLDVKATPTFFFFKDGQQIDKLVGANKPELQKKITAIVDSQATINP

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGGCATTGCTTCTCTTCGGTGAGTTTTCCTTGTAACAAAGAATTGAAAACTCTTCTCTTCGGTTTGTTCCAGTTTGAGCTTAGATGTTTTTGAACATATAGATAGTTGTGATGGAATA
TACAACTCATTGTTATGTTAAATGACAGACTTTAAGATATGACATAATCACATAAGTATGTTGAGTGGTTGGAGGATGGTCATTGCTGACTAGCTTCCATGGTTGCGTGGAAGAACGTGT
TAATACGATTATCTAAGACCAAATACTGTGAAAATACGTAAACTTATATGTGAATCATGAATATATAAGTTTTGTTATCAAAGTCATATGGATTTAAAGTTAGATGGCCAACGGTATTTT
CTGCAAGTTATGCCTGAATTATTGCTTGTGTTATCCCTTTGTCAAGAACGTTTGTGCATCCTGAATATAGAGGCCACAATTTTAACCCTTTTAGAAGATAAATTGAAAACGGGTCCAACT
GGTAAAATGCATACAACTATACAAGTATTTAAAAATGAAACAGGTAAACGGTTTAAACAGATCCAAAGCTGTCTTGTATTCAACTGCTTATAGTGTCCACACTTTTGTTTTAGTTAGAAA
TATGTTACATTATTAAATTAATAGTATAGCTTTTAATCATATTTCATCCATTTAGAACTTTTGAAAAATCAAGAATTCCATGAGATTCTGTTTGCGCATTTTGACCATTTTCATTTTCAT
TTTCATTTTCATTTTATATAATGTGGTTTTTGGTCGCATCTACATGATGTGAAATAAGAACTGATACGCGACCAGTGGCGGACCCAGGATTTTTTTCCAATGGGGTCCATTTTTTCGGTG
TTCAAAATTTTCATAACAAAAGGTTAAAATTTTCGGGTCGGTCCTTGTTCAGGTCGGGTCAGAGCGAGGTTTGAACTAGATTTAAAAAAAAACATAAAAATGAGGCTATACAAGGATTGA
ACCCATGACCTTTTGTTGTTAAAGAGGGAGGTTTACCACTAGACTAAATTTCCTTTTCTTTATATGGTGTCCACCTAATTGTATTTATGGGGTCCTTATAAAATTTAATATACCGGATCT
ACTAATTTTTTAAAAAACATTGGGGTCCGGGGACCCCGATCCATTCAATGTGGGTCCGCCCCTGTACGCGACCTAGTGACCCACAAAAAGAGTGAATGTTGTAAGCAGGGCCGGCCTGTA
GGGGGTGCGGGGTGGGTGACGGCACAAGGCCCAAACCATCCGAGGGACAAATCTTTTTAATTTTGTATATAATTTACGTTGTATAAGATAGAATACATATGCACTGAATAGAGAGATAAC
ATAAATGAGTCCTTGTACTAGTGGTTATTGCCTTGCTTAAACAACAAGGAGATGCGGGTTCTAATCCCAACGTCTCCAAATTCTTTATTTTAGCTTATTTTTTGGTTTTTTAATGTTAGT
GGCATTTAATGCTTAATTTTGTCAACTGCATCTTTTCCTTTAATTAATAAATTACTTCCTAAACTTAGCTAAAAATAACTATTTAAATTACATCCACATAAATTTAGTGATTGGTGAATT
AATATTAAATGGAGATTTTCGAATAAGGCCCAAATTTTTTATCACGCACAAGGCCAATTTTTTTTTTTTTTTTTTTTTTTGGTTTTCGGAGACGGCCCTGGTTGTAAGTTGCAACCAAAT
ACATCCTTAGTTTTTGAATTGACCATGTAATATGATACTTGTAGCCTCGGGCTGATGAAGACGAGACCAACAGTCATGCTCAGCTTGCGGGAGGTAACGTGACTCTCATCACTACCAAGA
ACGCTTGGGATCAAAAACTGGCAGAAGCAAAGACTCAAGGCAAAATA
GTAAGTCATTAAACTGTATATTAATTAGTAATTTAGTATATTCTTCTTTATGAAGTATTAATTAATTATAATC
TATGTTGTATGAACAAATAGGTGATTGGCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATGGCACCTTACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTTCTGA
CCGTAGACGTTGACGAATTAACG
GTAAGAGTTACATACATCTGTGTGAAGCTCCATGTATATAAGCTTATGTTGTGATGAAATGAATTTGGATGCAGGATTTTAGCACACAACTGGATGT
AAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAAATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAAGCAACCAT
AAATCCATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGGCATTGCTTCTCTTCGCCTCGGGCTGATGAAGACGAGACCAACAGTCATGCTCAGCTTGCGGGAGGTAACGTGACTCTCATCACTACCAAGAACGCTTGGGATCAAAAACTGGCAG
AAGCAAAGACTCAAGGCAAAATA
GTGATTGGCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATGGCACCTTACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTTC
TGACCGTAGACGTTGACGAATTAACG
GATTTTAGCACACAACTGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAAATTGATAAACTTGTGGGAGCCAACAAGC
CTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAAGCAACCATAAATCCATAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCAACAGTAT ATAATAATAT CATATTATGT AATAAGGTAT CATTTCATCA TCAATCTTCT ACCAAATTTC CAGATCAGTT GCTTTCAACT TTATTAAAAC CCTAATTAGG TGAGGTTTGT  GATTTAGCAG GAGCATCTAA CTTCAATCGT CACCGGAAAC TTCAAATTTC AGGGTAAGCG TACTGCGGTT ACTTTTTAAG AGATTGAAAT GGGGCATTGC TTCTCTTCGC CTCGGGCTGA  TGAAGACGAG ACCAACAGTC ATGCTCAGCT TGCGGGAGGT AACGTGACTC TCATCACTAC CAAGAACGCT TGGGATCAAA AACTGGCAGA AGCAAAGACT CAAGGCAAAA TAGTGATTGG  CAACTTCAGT GCAACTTGGT GTGGTCCATG CAAATCAATG GCACCTTACT ACATTGAGCT ATCAGAGAAG TATCCTTCTC TTATGTTTCT GACCGTAGAC GTTGACGAAT TAACGGATTT  TAGCACACAA CTGGATGTAA AAGCTACTCC AACATTCTTC TTCTTTAAAG ATGGTCAACA AATTGATAAA CTTGTGGGAG CCAACAAGCC TGAACTGCAG AAAAAGATAA CCGCCATTGT  TGATTCACAA GCAACCATAA ATCCATAATC ATTGTTATAT GATGCCTTGT GTTTCATGTT TTATGGGACA ATAGTACTGC ATTTTACCAG ATGAACATAT CTGCTCTATT GAATGTTGTC  TGTGATTCCT ATTAAACGAG TTCTTTTTTG CGCGAACCTG TAGATATATT CTTGACATGA TTTTTGGGTT TGTGTCATAT TCGAATTTGT GTTAAATTTG ACCTGAAACT GTGAATTTAA 
CAACTCCAAA CAATTATATG TTTTATTTTT ACAAAGTTTA CAATGAATTG AACTGAATAA AATATTGGG 

Retrieve as FASTA