View Redoxidase 14497

Entry information : HaTrxH01 (HanXRQChr01g0000531)

Entry ID	14497
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaTrxH01 (HanXRQChr01g0000531)

Name (synonym)

HaTrxH01 (HanXRQChr01g0000531)

Class

Thioredoxin Type H [Orthogroup: TrxH001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaTrxH01 start..stop	S start..stop
HaTrxH05	204	2.1e-69	1..135	1..134
ThasTrxH09-1	197	8.91e-67	1..135	1..134
ThasTrxH09-2	199	2.93e-66	1..133	100..231
HaTrxH06	196	4.71e-66	1..139	1..139

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14497' 'join(2045920..2045940,2047645..2047767,2047861..2047983,2048058..2048210)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2045920..2045940	19	N° 2	2047645..2047767	121	N° 3	2047861..2047983	121	N° 4	2048058..2048210	151
join(2045920..2045940,2047645..2047767,2047861..2047983,2048058..2048210)

Literature and cross-references HaTrxH01 (HanXRQChr01g0000531)

DNA ref.	HanXRQ genome: HanXRQChr01 (2045920..2048210)

Protein sequence: HaTrxH01 (HanXRQChr01g0000531)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	139
PWM (Da):	15204.55
PI (pH):	4.87

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGHCFSSPRADEDETNSHAQLAGGNVTLITTKNAWDQKLAEAKTQGKIVIGNFSATWCGPCKSMAPYYIELSEKYPSLMFLTVDVDELTDFSTQLDVKATPTFFFFKDGQQIDKLVGANK
PELQKKITAIVDSQATINP*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGCATTGCTTCTCTTCGCGGTGAGTTTTCCTTGTAACAAAGAATTGAAAACTCTTCTCTTCGGTTTGTTCCAGTTTGAGCTTAGATGTTTTTGAACATATAGATAGTTGTGATGGA
ATATACAACTCATTGTTATGTTAAATGACAGACTTTAAGATATGACATAATCACATAAGTATGTTGAGTGGTTGGAGGATGGTCATTGCTGACTAGCTTCCATGGTTGCGTGGAAGAACG
TGTTAATACGATTATCTAAGACCAAATACTGTGAAAATACGTAAACTTATATGTGAATCATGAATATATAAGTTTTGTTATCAAAGTCATATGGATTTAAAGTTAGATGGCCAACGGTAT
TTTCTGCAAGTTATGCCTGAATTATTGCTTGTGTTATCCCTTTGTCAAGAACGTTTGTGCATCCTGAATATAGAGGCCACAATTTTAACCCTTTTAGAAGATAAATTGAAAACGGGTCCA
ACTGGTAAAATGCATACAACTATACAAGTATTTAAAAATGAAACAGGTAAACGGTTTAAACAGATCCAAAGCTGTCTTGTATTCAACTGCTTATAGTGTCCACACTTTTGTTTTAGTTAG
AAATATGTTACATTATTAAATTAATAGTATAGCTTTTAATCATATTTCATCCATTTAGAACTTTTGAAAAATCAAGAATTCCATGAGATTCTGTTTGCGCATTTTGACCATTTTCATTTT
CATTTTCATTTTCATTTTATATAATGTGGTTTTTGGTCGCATCTACATGATGTGAAATAAGAACTGATACGCGACCAGTGGCGGACCCAGGATTTTTTTCCAATGGGGTCCATTTTTTCG
GTGTTCAAAATTTTCATAACAAAAGGTTAAAATTTTCGGGTCGGTCCTTGTTCAGGTCGGGTCAGAGCGAGGTTTGAACTAGATTTAAAAAAAAACATAAAAATGAGGCTATACAAGGAT
TGAACCCATGACCTTTTGTTGTTAAAGAGGGAGGTTTACCACTAGACTAAATTTCCTTTTCTTTATATGGTGTCCACCTAATTGTATTTATGGGGTCCTTATAAAATTTAATATACCGGA
TCTACTAATTTTTTAAAAAACATTGGGGTCCGGGGACCCCGATCCATTCAATGTGGGTCCGCCCCTGTACGCGACCTAGTGACCCACAAAAAGAGTGAATGTTGTAAGCAGGGCCGGCCT
GTAGGGGGTGCGGGGTGGGTGACGGCACAAGGCCCAAACCATCCGAGGGACAAATCTTTTTAATTTTGTATATAATTTACGTTGTATAAGATAGAATACATATGCACTGAATAGAGAGAT
AACATAAATGAGTCCTTGTACTAGTGGTTATTGCCTTGCTTAAACAACAAGGAGATGCGGGTTCTAATCCCAACGTCTCCAAATTCTTTATTTTAGCTTATTTTTTGGTTTTTTAATGTT
AGTGGCATTTAATGCTTAATTTTGTCAACTGCATCTTTTCCTTTAATTAATAAATTACTTCCTAAACTTAGCTAAAAATAACTATTTAAATTACATCCACATAAATTTAGTGATTGGTGA
ATTAATATTAAATGGAGATTTTCGAATAAGGCCCAAATTTTTTATCACGCACAAGGCCAATTTTTTTTTTTTTTTTTTTTTTTGGTTTTCGGAGACGGCCCTGGTTGTAAGTTGCAACCA
AATACATCCTTAGTTTTTGAATTGACCATGTAATATGATACTTGTAGCCTCGGGCTGATGAAGACGAGACCAACAGTCATGCTCAGCTTGCGGGAGGTAACGTGACTCTCATCACTACCA
AGAACGCTTGGGATCAAAAACTGGCAGAAGCAAAGACTCAAGGCAAAATATAGTAAGTCATTAAACTGTATATTAATTAGTAATTTAGTATATTCTTCTTTATGAAGTATTAATTAATTA
TAATCTATGTTGTATGAACAAATAGGTGATTGGCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATGGCACCTTACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTT
TCTGACCGTAGACGTTGACGAATTAACGCGGTAAGAGTTACATACATCTGTGTGAAGCTCCATGTATATAAGCTTATGTTGTGATGAAATGAATTTGGATGCAGGATTTTAGCACACAAC
TGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAAATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAAG
CAACCATAAATCCATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGCATTGCTTCTCTTCGCCTCGGGCTGATGAAGACGAGACCAACAGTCATGCTCAGCTTGCGGGAGGTAACGTGACTCTCATCACTACCAAGAACGCTTGGGATCAAAAACTGGCA
GAAGCAAAGACTCAAGGCAAAATAGTGATTGGCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATGGCACCTTACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTT
CTGACCGTAGACGTTGACGAATTAACGGATTTTAGCACACAACTGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAAATTGATAAACTTGTGGGAGCCAACAAG
CCTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAAGCAACCATAAATCCATAA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CCAACAGTAT ATAATAATAT CATATTATGT AATAAGGTAT CATTTCATCA TCAATCTTCT ACCAAATTTC CAGATCAGTT GCTTTCAACT TTATTAAAAC CCTAATTAGG TGAGGTTTGT GATTTAGCAG GAGCATCTAA CTTCAATCGT CACCGGAAAC TTCAAATTTC AGGGTAAGCG TACTGCGGTT ACTTTTTAAG AGATTGAAAT GGGGCATTGC TTCTCTTCGC CTCGGGCTGA TGAAGACGAG ACCAACAGTC ATGCTCAGCT TGCGGGAGGT AACGTGACTC TCATCACTAC CAAGAACGCT TGGGATCAAA AACTGGCAGA AGCAAAGACT CAAGGCAAAA TAGTGATTGG CAACTTCAGT GCAACTTGGT GTGGTCCATG CAAATCAATG GCACCTTACT ACATTGAGCT ATCAGAGAAG TATCCTTCTC TTATGTTTCT GACCGTAGAC GTTGACGAAT TAACGGATTT TAGCACACAA CTGGATGTAA AAGCTACTCC AACATTCTTC TTCTTTAAAG ATGGTCAACA AATTGATAAA CTTGTGGGAG CCAACAAGCC TGAACTGCAG AAAAAGATAA CCGCCATTGT TGATTCACAA GCAACCATAA ATCCATAATC ATTGTTATAT GATGCCTTGT GTTTCATGTT TTATGGGACA ATAGTACTGC ATTTTACCAG ATGAACATAT CTGCTCTATT GAATGTTGTC TGTGATTCCT ATTAAACGAG TTCTTTTTTG CGCGAACCTG TAGATATATT CTTGACATGA TTTTTGGGTT TGTGTCATAT TCGAATTTGT GTTAAATTTG ACCTGAAACT GTGAATTTAA
CAACTCCAAA CAATTATATG TTTTATTTTT ACAAAGTTTA CAATGAATTG AACTGAATAA AATATTGGG

Retrieve as FASTA