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Entry information : HaTrxH03 (HanXRQChr08g0220871)
Entry ID 14499
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaTrxH03 (HanXRQChr08g0220871)
Name (synonym) HaTrxH03 (HanXRQChr08g0220871)
Class Thioredoxin Type H    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrxH03
start..stop		 S start..stop
HaTrxF01 242 5.31e-82 63..245 1..174
ThasTrxF02 195 1.57e-63 123..245 59..179
AtTrxF02 195 1.63e-63 115..245 57..185
ThasTrxF01 195 2.11e-63 123..245 60..180
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46606256..46606758 501 N° 2 46604896..46604995 98 N° 3 46604165..46604299 133  
complement(join(46604165..46604299,46604896..46604995,46606256..46606758))


exon

Literature and cross-references HaTrxH03 (HanXRQChr08g0220871)
DNA ref. HanXRQ genome:   HanXRQChr08 (46606758..46604165)
Protein sequence: HaTrxH03 (HanXRQChr08g0220871)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   245
PWM (Da):   %s   26956.14  
PI (pH):   %s   10.28
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATTHKFSTQITHISPPSNQPNPRVTPSFHTRYHIITYQPSNIQNTLTHNRLPPTTTTTTTTMALQIHHVCRPISPPSPSPPPSLSPSSWPTKQSNIVGEVRRSFNLVKTTSSKTANKLR
NLTVRSSLEASGTAVVVGVVTEVDKDTFWPIVNAAGDKTVVLDMYTQWCGPCKIIAPRFQELAEKNLDVVFLKLDCNQENPLAKELGIKVVPTFKILKHGKIVKEVTGAKFDNLVAAMEE
VRSS*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACCACACATAAATTCTCTACCCAAATCACCCACATATCTCCCCCATCAAATCAACCAAACCCAAGGGTAACTCCGTCCTTTCACACCAGATATCATATTATCACTTATCAACCA
TCTAACATCCAAAACACACTCACTCATAACCGTCTTCCACCAACCACAACCACAACCACCACTACAATGGCGTTACAAATTCATCACGTCTGCCGCCCTATTTCACCGCCGTCACCGTCA
CCGCCGCCCTCGCTATCACCGTCGTCATGGCCGACTAAGCAATCGAACATCGTCGGAGAAGTTCGCCGGTCGTTCAATCTAGTGAAAACGACGAGTAGTAAAACCGCCAACAAATTGAGG
AATTTGACGGTGAGATCGAGTTTGGAAGCCTCTGGTACGGCGGTGGTTGTCGGTGTGGTTACGGAGGTCGATAAGGATACGTTTTGGCCGATCGTTAATGCCGCCGGTGATAAGACTGTT
GTTCTCGATATGTACACTCAGTGGTAAATTAGTTATTATTTGCTTATATTGCATTTTTCTGTTAGTTTAGTTGTTGATTGTTAAGAATTAGTTGCAGATCTGGAAAGTAGAATTCACTTA
TTGTGAAATTAAGTTTAGTAGAGTGTTTCAGTTTGGGAATAATTTAGTAGAATTAATAATTTATAATTATATGTAAGAAATTTTGCATGATCGCTAGTCAATTTGAACTATGAAAGTAGG
AAATTAGTGTATCTCTTAGGTCAGTTCAATAAGATGCTATAGATACAAACTTAATTACTTTAAACATTATATTGTGTTATACTTTACTAGTTTACTATATAGGTTCCATAGTTTACATGA
CAGCTATGTTCATAAAAGTGTGAGGTGCTAAGAGGTTCTTAGGTCTCGAAAGCTGGGACGCGAGTTTCACATACGCGAGGTGTTGCTCTCCGTACAAGCCAAAATAAGCTTTATGTGTTG
GACAGGAATTAATCACCAGGAACAAAACAACACAGAGTTGTTCTGATTGAATCAGGAACAAGATTAGAAACAATGGAACAATGAGTGTTTAGAGAATACATAAACTTTAGTAAACAGTAA
GGACTGATATATTTCTAGGAGATTGATTCACTATGTACATACATAGGGGACGGTTTTGGTGGAAGGGACACAACGCTTCGAAAACGGATGCAACCCTAATCTGGATTACAAACTTGAAGC
ATAACTTATATACTTAGATCTTAGTGTTTTATATAATTACAACTAGATCCATACATTAACACATATACTTGACTTTTCTTTTTGACATTTCTTTCTCCTGTTCTTTATTACTGTGTTGGG
ATAACTTATGTATGAATGATATTTATGTTAGCATTTTTTTATACTTATATTTGTGGCAACTTCTAATTGGCAATATCTTGGGCAATATCTTGTAAGGTATCTCCTCCACCCAAAAAACAG
TAAATCTTGACTTCTGAACATCTTTTTACTTGGTTTGAACAGTAAAAAATTGATCCATTTGGAAAAGATTTTTTATACAAAATCTTTCATTAGACATGCAATTCATCCTAACTTTCTCGT
ATGAGAGGGTAAACGTATGGTGTGCACGAGTATTGTTTGAATCCGACTTGATTATTGTAATTTTTTTTCTTGGTAAACAGTTGTATGAGACATGGTTTTATTTGTTAATTATAATTATAA
CATAACCGTATGTGTAATGGTGTTTATGTAATCAGTGTGGTTTTATATTGTTCACGGTTTCTGATTTGTTTGGATCTTGATAGGTGTGCGGTCCTTGCAAGATAATCGCGCCAAGGTTCC
AAGAATTGGCTGAGAAGAATCTTGATGTTGTATTTCTAAAGCTTGACTGCAATCAAGAAAATAAGGTATAGTTGTTTTATAATATTCCAAGAAGTGTATGTATACCACCAATATTACTAT
TTAGACTATCAATCAAGCTATGAAGTTTTTTAAAGTTATTGTATGTTTCAAACAAGTTCTTAAATATAATAACTTCTTTTGTTTTGTTTTGTTTTCTATACGTATAGTAACCGAGGTTTA
CTAGAGTTCTCTCTTTTTGCAGCTCACCCTGTTTGATATATAACATTTTTCTTTTTTTCCCGATTTTCATTTAAGATATAACTTAGCTTTTATCTTAGTATCTAATATATAAATTTAAAT
ATACTGTTATGTTCAGACGGAGTTACTTTTCCATTAAAGTGGGATTGACCATAGTGACGAAAATGAAAGTTAGGAACCAGTATGAATTATTATTGGCTAACGGGTCATAGCTTGGATTAC
TAAAATCCAAATCGCCTAATTGTCTTTATCTTCGATATATTTATATGTTTTTTGAAAAAACTGAGTTATCCATCATAAAGTATTTTTCTGCATAACTGACAAAAAGAAAAAACCGATAGA
ATTGATTTTGATATCATTTTGTATGACTTCTGGTGGTAATATTATTGATATGTGTTGGCAGCCCCATTGGCAAAGGAGCTAGGCATAAAGGTGGTCCCTACCTTCAAGATCCTTAAACAT
GGTAAAATTGTAAAAGAAGTTACTGGGGCTAAGTTTGATAACTTGGTTGCAGCCATGGAGGAAGTTAGATCCAGTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACCACACATAAATTCTCTACCCAAATCACCCACATATCTCCCCCATCAAATCAACCAAACCCAAGGGTAACTCCGTCCTTTCACACCAGATATCATATTATCACTTATCAACCA
TCTAACATCCAAAACACACTCACTCATAACCGTCTTCCACCAACCACAACCACAACCACCACTACAATGGCGTTACAAATTCATCACGTCTGCCGCCCTATTTCACCGCCGTCACCGTCA
CCGCCGCCCTCGCTATCACCGTCGTCATGGCCGACTAAGCAATCGAACATCGTCGGAGAAGTTCGCCGGTCGTTCAATCTAGTGAAAACGACGAGTAGTAAAACCGCCAACAAATTGAGG
AATTTGACGGTGAGATCGAGTTTGGAAGCCTCTGGTACGGCGGTGGTTGTCGGTGTGGTTACGGAGGTCGATAAGGATACGTTTTGGCCGATCGTTAATGCCGCCGGTGATAAGACTGTT
GTTCTCGATATGTACACTCAGTGGTGCGGTCCTTGCAAGATAATCGCGCCAAGGTTCCAAGAATTGGCTGAGAAGAATCTTGATGTTGTATTTCTAAAGCTTGACTGCAATCAAGAAAAT
AAGCCATTGGCAAAGGAGCTAGGCATAAAGGTGGTCCCTACCTTCAAGATCCTTAAACATGGTAAAATTGTAAAAGAAGTTACTGGGGCTAAGTTTGATAACTTGGTTGCAGCCATGGAG
GAAGTTAGATCCAGTTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACCA CACATAAATT CTCTACCCAA ATCACCCACA TATCTCCCCC ATCAAATCAA CCAAACCCAA GGGTAACTCC GTCCTTTCAC ACCAGATATC ATATTATCAC TTATCAACCA  TCTAACATCC AAAACACACT CACTCATAAC CGTCTTCCAC CAACCACAAC CACAACCACC ACTACAATGG CGTTACAAAT TCATCACGTC TGCCGCCCTA TTTCACCGCC GTCACCGTCA  CCGCCGCCCT CGCTATCACC GTCGTCATGG CCGACTAAGC AATCGAACAT CGTCGGAGAA GTTCGCCGGT CGTTCAATCT AGTGAAAACG ACGAGTAGTA AAACCGCCAA CAAATTGAGG  AATTTGACGG TGAGATCGAG TTTGGAAGCC TCTGGTACGG CGGTGGTTGT CGGTGTGGTT ACGGAGGTCG ATAAGGATAC GTTTTGGCCG ATCGTTAATG CCGCCGGTGA TAAGACTGTT  GTTCTCGATA TGTACACTCA GTGGTGCGGT CCTTGCAAGA TAATCGCGCC AAGGTTCCAA GAATTGGCTG AGAAGAATCT TGATGTTGTA TTTCTAAAGC TTGACTGCAA TCAAGAAAAT  AAGCCATTGG CAAAGGAGCT AGGCATAAAG GTGGTCCCTA CCTTCAAGAT CCTTAAACAT GGTAAAATTG TAAAAGAAGT TACTGGGGCT AAGTTTGATA ACTTGGTTGC AGCCATGGAG  GAAGTTAGAT CCAGTTAGAC AAAACTTAAA CCCATCTGTC TATAAGTACT AATTTATATG TTTCAAATTA AACTATAAAT AACTATCAAC CATGCTCAAG TGTTCGTTCT AGCCTTTCTA  TGAACACTGA AATAAGCGAC CCCGACTGGA CTTTCCAGGT TGTGCGTGTT TGCAAAGTCA TGGGTACTGA AACAAGCGAC CCCGACGGTC CATATGAGCT AGGAGCTCGT CATGTTCACC  TCTTGTGAGA ATCATGTAAT TTCAGCAAGG CCCACTCTAA GTTTGGAACC ATTGATCAAC CTATGGTTAC CGCCATATAT AACCGTTAGG CATTAGGCTA CGAGATATCT ATATTTTTTA 
TCTTACCCAT CCTACAACTC TCTCTCCTTT ATGTAAAAAA GTATTAAATT A 

Retrieve as FASTA