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Entry information : HaTrxH04 (HanXRQChr09g0269471)
Entry ID 14500
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaTrxH04 (HanXRQChr09g0269471)
Name (synonym) HaTrxH04 (HanXRQChr09g0269471)
Class Thioredoxin Type H    [Orthogroup: TrxH002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrxH04
start..stop		 S start..stop
HaTrxH08 199 3.58e-68 1..113 1..113
AtTrxH01 146 3.96e-47 2..111 3..112
HaTrxH09 144 2.99e-46 1..118 1..116
ThasTrxH01 143 5.49e-46 2..111 3..112
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 185989434..185989520 85 N° 2 185989735..185989857 121 N° 3 185990163..185990318 154  
join(185989434..185989520,185989735..185989857,185990163..185990318)


exon

Literature and cross-references HaTrxH04 (HanXRQChr09g0269471)
DNA ref. HanXRQ genome:   HanXRQChr09 (185989434..185990318)
Protein sequence: HaTrxH04 (HanXRQChr09g0269471)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   121
PWM (Da):   %s   13112.65  
PI (pH):   %s   5.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEEGIVVGCHNADQWKEHFDKHKASQKLVVVDFTASWCGPCRVIAPILADYAKKFPHVAFLKVDVDEVESVAQEYSVEAMPTFLFFKNGVKVDTVVGAKKDELLACIVKHAGEAAATVS
A*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAAGAAGGAATTGTTGTCGGTTGCCACAACGCTGATCAATGGAAAGAGCATTTTGATAAGCACAAGGCTTCTCAGAAATTGTGGTATTCTTTTTTCTTGAATTCTAGGGTTTCC
GATTTGAATTTTCAAAATTCGCATTCAATTTCGTAAAATTTTCGTTAATTCAATGTTGTTTATTGCTCGTACGGTTTTCCGACTGTTTAATTCGTTAATTTTACGGTTTGGAGGGCCCGA
TAGCTCAATTAGGGTTTGTTTTTTTTTTTTTGTTTTTGAAATTATACGTCGTATGATTGACAGGTTGTTGTGGATTTCACTGCTTCATGGTGCGGTCCTTGCCGTGTAATTGCACCGATC
TTGGCTGATTATGCTAAAAAGTTTCCTCATGTCGCCTTCTTGAAGGTCGATGTCGATGAAGTTGAGAGGTAAATATTTGCATTTGAATGATGGTGATGATGATGTGCTTCTTTATTACTA
TTTAAAATTCGCTTTACATATGGAAAATGTTACTGTTCATTTCATCTTTATGAAAGCGGTTGATAATGATAAAGGTATTTAATTGAAACTAGAAAAACTATGTATTGATTTTTATGTAAT
TATAAGATTGAGGCCAGGAAAAGGGATGTAAAATAATAAAAAAAAAACTTTAGTTGTATGTTTCATAATTGTATGTATGGTAATATGGATCTTTGAACTTGGAGTTGATGAATTGATTGG
TGTTTGTATGCAGAGTGTTGCTCAGGAGTATTCAGTGGAAGCGATGCCGACGTTCTTGTTCTTCAAGAACGGTGTGAAGGTGGACACAGTTGTTGGTGCTAAGAAGGATGAACTTCTTGC
CTGCATTGTGAAGCATGCTGGAGAGGCTGCTGCAACTGTATCTGCTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAAGAAGGAATTGTTGTCGGTTGCCACAACGCTGATCAATGGAAAGAGCATTTTGATAAGCACAAGGCTTCTCAGAAATTGGTTGTTGTGGATTTCACTGCTTCATGGTGCGGT
CCTTGCCGTGTAATTGCACCGATCTTGGCTGATTATGCTAAAAAGTTTCCTCATGTCGCCTTCTTGAAGGTCGATGTCGATGAAGTTGAGAGTGTTGCTCAGGAGTATTCAGTGGAAGCG
ATGCCGACGTTCTTGTTCTTCAAGAACGGTGTGAAGGTGGACACAGTTGTTGGTGCTAAGAAGGATGAACTTCTTGCCTGCATTGTGAAGCATGCTGGAGAGGCTGCTGCAACTGTATCT
GCTTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ACAAAGCATC GTATTTTGAT GAAAAGATAA TCTAGAATAA TCCTTCGTTT CACATTTGCA GGTCATTTCC GTAATTATAA ACACGCTTAG GGGCATTTAC GTAATATCAT CCACCGATGA  AAGAGCATAG CCCTATAAAT TGAGGGGTTG GGTGCAGGAC AATCTTCATA CTCAAGAAAT TAAATTTGCA AGCTAAAAAA TTCAAATTAG GGTTTTCTGA AAGATCAATT TGGGGGAAAT  GGCTGAAGAA GGAATTGTTG TCGGTTGCCA CAACGCTGAT CAATGGAAAG AGCATTTTGA TAAGCACAAG GCTTCTCAGA AATTGGTTGT TGTGGATTTC ACTGCTTCAT GGTGCGGTCC  TTGCCGTGTA ATTGCACCGA TCTTGGCTGA TTATGCTAAA AAGTTTCCTC ATGTCGCCTT CTTGAAGGTC GATGTCGATG AAGTTGAGAG TGTTGCTCAG GAGTATTCAG TGGAAGCGAT  GCCGACGTTC TTGTTCTTCA AGAACGGTGT GAAGGTGGAC ACAGTTGTTG GTGCTAAGAA GGATGAACTT CTTGCCTGCA TTGTGAAGCA TGCTGGAGAG GCTGCTGCAA CTGTATCTGC  TTAGATATGT TATGATGATG ATGATGTATC AGCAACTTGT TTGAATCTTT TGTTAAGGAA TATTGGCTGT GTAATCTTGG TTTTATGACT TTGTGGTTTT ATCTATTATG CATAAATTAA  AGTTGCTGTA GTTTGGTTGG TTGGTTTGTT TTCTGTTCAT ATTTTGATTT ATTTGGCATT TGGATAGGAT TAGTTTTACT ATGCTATGAA TAGGAATATT AGACCATCAA GTGGGTCACA  TAATATAAAG GAATTGACAT AAAAAGATAT CACTTATACT GTTTGATGTC TCTATTTGAT GTCGCTATGT ACAATTACTT AACTCGTTAT ATTGATGCTT CTTTAGTAAG TAAAAAGGAA 
GATAATT 

Retrieve as FASTA