Entry information : HaTrxH05 (HanXRQChr11g0345311)
Entry ID 14501
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaTrxH05 (HanXRQChr11g0345311)
Name (synonym) HaTrxH05 (HanXRQChr11g0345311)
Class Thioredoxin Type H    [Orthogroup: TrxH001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrxH05
start..stop
S start..stop
HaTrxH01 204 2.09e-69 1..134 1..135
HaTrxH06 186 2.75e-62 1..135 1..136
ThasTrxH09-1 183 5.93e-61 1..138 1..138
AtTrxH09 178 4.15e-59 1..132 1..132
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14501' 'join(137891296..137891316,137892227..137892346,137893479..137893601,137893692..137893847)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 137891296..137891316 19 N° 2 137892227..137892346 118 N° 3 137893479..137893601 121 N° 4 137893692..137893847 154
join(137891296..137891316,137892227..137892346,137893479..137893601,137893692..1 37893847)


exon

Literature and cross-references HaTrxH05 (HanXRQChr11g0345311)
DNA ref. HanXRQ genome:   HanXRQChr11 (137891296..137893847)
Protein sequence: HaTrxH05 (HanXRQChr11g0345311)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   139
PWM (Da):   %s   15211.66  
PI (pH):   %s   4.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGLCFSSTTADEAPANHPHFTGGKVTFITNKDVWNQKLSEAKTQGKIVIANFSASWCGPCKSIAPLYIELSEKHLSLMFLTIDVDELTELSTQWDVKATPTFFFLRDGQQIDKIVGANKA
ELQEKLSTIVDSQVPGDQK*

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGACTTTGCTTCTCTTCGCGGTGAGTTGTCCTTTAATTTACAGACATTTGTATCTACATAGGCTGCTATGTTAAATTAGAAAAAAAAATATTGTATGGTAGGAGGTTAGTCATCTAT
GATTTGCTTCGACGATGCATGCGTTTTTGCTATCAAATACTGTTGCAGAAAATCAAATGTGATGGGTGGTACAGGGTTATCTTCTTTGTGTTTAGGGTTTATAATTTATGCTTTTCGAAT
GATTCTTGATTGCTTTTCCATGGTAGCGGTGGTAAAATGGGTGGATTAGCAAATGATTCAAAATGGGTTCAGGTCAAAACACGTAGGTTTTTCTATCATGAGTCAGGTCGGGTTGACCCG
CACACTTCTTTGGTGATCCAGTGTCTTAAATTTGTACGAATAGTCAATGTGCCAAAATATGATTAATCAACCATATTGTTATAATCTAGGGGGTCTATGCATTAAAATAATGCACTTTGG
GCATCCATTTGAAGCATAAGTATTTCCTTCCTAGCTAATAATACATACATTCATCCATTTGAGTCAAAACCTATCCTAAATTGACATAAACTGTTTGCAGATCCTTTTCATTACCAAGTT
GTTTTGGACATCTTTTTGGTATGTCCAAGTTAAAAACTTAAATAATTGTAAGTTACCTCACAACGATGATGTGCTGCTGCGTGTTCTTTCATCATGTTAATATGTTATGTTGAGTTATAA
GTGTATATTAGTTGACAAACTATTCATTTCAAGTCACAAAAAAGGTAGAAATATTCTTTACATTGGTAGAATGGGTTAAACAAGTCAAAAGCCTCTAAATGTGTTTTCAAATGCTTACAT
AAAGTATATTGTGTGAGAAGGGGAAGGGATGAAATAAAATCGTAAAAGTACAACCTTAATTTTTGGATTGACCATTGGATTTGATGCTTGTAGACTACGGCGGATGAAGCACCTGCCAAT
CATCCTCATTTTACGGGAGGTAAAGTCACCTTCATCACTAACAAGGATGTTTGGAACCAAAAGCTCTCAGAAGCAAAGACTCAAGGCAAAATA
TAGTAAGTCATCAAACTTATTTAACAT
ACTCTTGCATTTTCTATATCGTATCTAGAATTATGTACATTCAATGTAGAATCAGTTTTAAGTAGAGTACTTAGGGAACCACATAGGAACTCGTACTTACTTCTTGTCCAGTGCCGGCTC
AAGCCCAAGCCAAATAAGGCAACTGCTTTGGGCCACAAAATTTTTGAGGCCCCATATTTTACAGGCTTGACTTTAGGTTAAACCCATTTTTTTTTTCATTTGGCATTCATGATGATTGAA
GTCTTGCAAATTCCCGTAAGTTTCCATTAATTCATTGCATGTTCCCATGAGAGAAATAATTGATTTTACTAATAGAACATGTAATTCCAAATTGTGAAGAAGATAAATATATAAATCGTG
AGGTTTGTTTTGTTTTTTTTTCTTTATCCTATTTGTGAAGCCGGTTCATATCCCCATAAGTGATAAATAGTAATGCAATAACCGCGTTATGTGGTTACATAACCGCGTTATATGTCATAG
TTAATGCAATAGGTACATGTGTTTAGGAGGTTTCAAGTGTTAACATATGTGTGTGTAGGGAGGGGATCATTTCAGAACACACAATTTTTTGCAAGAACACGCATAACAAATTTAAACAGT
TTAGTTTTTAACAAGTTATTTATCTTTATAAATATTTGTACTTCTAGTTTTTAATAAGTTATTTATCTTTATAAATATCTGTACTTCTTGAGTAGGTTATGTACATAAAAAGTCATCAAA
GTATGTGTAGGTTACATTACCTAGTATACATGAGATCCCAAACATATTTGCAGGGCCGGCCAATCCGTGCCGTCGCTCGAGGCCCAAATTTTTAAAGGGCCCGAAAAGTTTTTATAAGCT
TCTATAGATATAGTAAATTATGTATTTAATATACGCATTCATTTATTGTAATTAAAATTGTTGGTGGTGGAGTGGAAAAAACCATCTCAAGTTATTGTAAAGGTCTCAAGTTCAATACTT
TGCTCCACCACAAATGTCTATTTTTTTAAATTCATTTCCCCTTACCACAATTTTGGGCCCAAATTTTTATTTTGCCCGAGGCCTAAATTATTTAGAGAGTTTTCTACGTTTTGATATATT
GATTATATTACTTTGTACGATTAACAGGTTATTGCTAACTTTAGTGCATCTTGGTGTGGTCCATGCAAATCAATTGCACCATTATACATTGAGCTTTCCGAGAAGCATCTTTCTCTTATG
TTTCTGACCATAGACGTTGATGAATTAACG
CGGTAATTAAGTTACACCATTTGTTTTAAAATTATGTCGCCCTTTAGGTTTCCGATAATTGTAGCGAAAGTTAGATGTAAGTTTTGATGC
AGGAGTTAAGCACACAATGGGATGTAAAAGCTACTCCAACATTCTTCTTCCTTAGAGATGGGCAGCAAATTGATAAAATCGTGGGAGCCAACAAGGCTGAGCTGCAGGAAAAATTATCCA
CCATAGTCGATTCACAAGTCCCAGGTGATCAAAAGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGACTTTGCTTCTCTTCGACTACGGCGGATGAAGCACCTGCCAATCATCCTCATTTTACGGGAGGTAAAGTCACCTTCATCACTAACAAGGATGTTTGGAACCAAAAGCTCTCAGAA
GCAAAGACTCAAGGCAAAATA
GTTATTGCTAACTTTAGTGCATCTTGGTGTGGTCCATGCAAATCAATTGCACCATTATACATTGAGCTTTCCGAGAAGCATCTTTCTCTTATGTTTCTG
ACCATAGACGTTGATGAATTAACG
GAGTTAAGCACACAATGGGATGTAAAAGCTACTCCAACATTCTTCTTCCTTAGAGATGGGCAGCAAATTGATAAAATCGTGGGAGCCAACAAGGCT
GAGCTGCAGGAAAAATTATCCACCATAGTCGATTCACAAGTCCCAGGTGATCAAAAGTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GTTTCTGTTC CCTCTTAAAA TTTCCACATG GCACCTTCTA AAACAAATTC GATATGAATA TTCGTAACAA GAAAAAGGTG ACCAAAATTT CAAAATTAGG TCTGTACGAT ATACCCTAAT  TAGGTTACGA TTTGTGATTT TGCAGGAGCA ACACATTTCA ATCGTTGCCT GAAATAGGGT AAACCCACTG CAGTTACTTT TTGAAACCTC TAAATGGGAC TTTGCTTCTC TTCGACTACG  GCGGATGAAG CACCTGCCAA TCATCCTCAT TTTACGGGAG GTAAAGTCAC CTTCATCACT AACAAGGATG TTTGGAACCA AAAGCTCTCA GAAGCAAAGA CTCAAGGCAA AATAGTTATT  GCTAACTTTA GTGCATCTTG GTGTGGTCCA TGCAAATCAA TTGCACCATT ATACATTGAG CTTTCCGAGA AGCATCTTTC TCTTATGTTT CTGACCATAG ACGTTGATGA ATTAACGGAG  TTAAGCACAC AATGGGATGT AAAAGCTACT CCAACATTCT TCTTCCTTAG AGATGGGCAG CAAATTGATA AAATCGTGGG AGCCAACAAG GCTGAGCTGC AGGAAAAATT ATCCACCATA  GTCGATTCAC AAGTCCCAGG TGATCAAAAG TAACCATAAT CTGGTCAATG GAATACAAAG AGTCTTAATC ATTTTTTGTT TGTTTTATGG TATTCTTATA AATGACTTAT GTTTCATGGT 
ATTGGTTGAT GGTACATACA TGTCAATATA TTAATTTGTT CACTTCATTC TCAAATGTTG AGTATTTAGC TAG 

Retrieve as FASTA