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Entry information : HaTrxM03HanXRQChr10g0302791
Entry ID 14508
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaTrxM03HanXRQChr10g0302791
Name HaTrxM03HanXRQChr10g0302791
Class Thioredoxin Type M    [Orthogroup: TrxM001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrxM03
start..stop		 S start..stop
HaTrxM04 292 1.1e-102 1..185 1..185
HaTrxM01 265 1.71e-91 1..185 35..212
HaTrxM06 249 5.22e-86 1..185 1..163
ThasTrxM04-2 203 1.99e-67 1..185 1..191
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 172709506..172709749 242 N° 2 172710848..172711161 312  
join(172709506..172709749,172710848..172711161)


exon

Literature and cross-references HaTrxM03HanXRQChr10g0302791
DNA ref. HanXRQ genome:   HanXRQChr10 (172709506..172711161)
Protein sequence: HaTrxM03HanXRQChr10g0302791
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   19919.37  
PI (pH):   %s   8.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGVLEILTVPRASGVPASSMSRIASSSVSRLSGCRNAVNLPESRGLKIRSFASSASVSLRSKIGRRTCRIVCEAQDTAVQVLPVTDATWQSLVLESDLPVLVEFWAPWCGPCRMIHPVI
DELAKEYNGKLTCYKVNTDESPSIATKYGIRSIPTIIVFKDGEKKDAIIGAVPKSTLCTCIEKFL

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGGCGTTCTTGAGATCCTCACCGTTCCTCGCGCCTCCGGTGTACCGGCGTCTTCGATGTCTCGCATCGCCTCTTCTTCCGTCTCTCGGTTATCCGGCTGCCGGAATGCAGTAAAC
TTACCGGAATCCAGAGGTTTAAAGATCCGGTCATTCGCTTCTTCTGCATCAGTGAGCCTGAGGTCCAAAATCGGCCGCCGTACATGCCGTATTGTATGCGAGGCTCAAGATACAGCCGTA
CAAGAGGTTAGAATTGTCCATTATTTTACCTCAATTTCTCAAGCATTGAATTGTGTTAGATTGCTTATAGCATTTTTGTTTTACACCTAATTGATACTGTAATGACCTAGGGTTTCGTAT
GCCGATTTTACATTTTATTGCTCCGTTCAGTTTACAATAGAGCTACTCTTCAACTGCACAGATGCGCAGATGATATGATTTTGTTGCCATATTAACCCAAGCATTGTTGATTTTTAAAGT
TGTTATGCTTCTGTAACGCAGTAAGTTGCCCCTTAGAATATGTAAATCCATGAATTTTGAGATTGAAAAGTCATGAATCAGATGCAGCTGTTGTGTGTATAACAAATGAGTGTGTATCTG
TAAGAATTTGAGAGTATGTTGCAATCATGCTGGACATTTGGTTGTAATTATTCATCATCAGTACGTAATGTGTTTTGTTTGTTAACAATGTACAAAAGAGCTTCTATTCAACTGCACAGA
CGATATGATTTTGTTACAACACCAACACAGTTTGTTATGATTTTATAACTCAACAAGTTGCGCTAGAAAAAGGTTTAAATTCATTAACTCTGAGACTGAAAAGTATTTTGATGGACATCT
GAAGTCATGAACTCAAATGTAGCTTTTGTGAGTATAATACATGAGTATCTGTTATATCATTAAGGATTTGAGAGTATGTTGAAATCTTGCTGAACATTCGGTTGTGGTTAACTGATTATT
CATCATCATTCATCAATAAGTAATGCATTTTGTAATTTTTGTTCGTTAACAATGTACAAAAGAGCTACTATTCAACGGCACAGATGATATGATTTTGTTGCGACATTAACACAAGCATTG
TTTCTTTTTCGATTTGTTATGGTTCTATAATGCAGCAAGTTGCAGTAGAAAAAAAGTTTAAATCCTTGAGTTTTGAGATTGAAAAGTAATTTGATGGACATATGAAGTCATGAACTCGTA
TGTAGCTGTTGTGTGTGTAACAAATGAGTACTGTTATATCTTTTAGGATTTAAGAGTATGTTGCAGTCTAGCTCAACAATTGGTTGTGATTATTCATCATCAGTAAGACAATAAGTAATG
CGTTTTGTTCGTTGACAATGGCAGTGCTTCCTGTTACTGATGCAACATGGCAATCACTAGTCCTAGAGTCTGATCTCCCTGTACTAGTTGAATTCTGGGCCCCATGGTGCGGGCCGTGTC
GCATGATCCACCCTGTCATAGATGAGCTGGCAAAGGAATACAACGGAAAACTCACTTGCTACAAAGTAAACACTGATGAGAGTCCTTCGATCGCGACCAAGTATGGAATCAGAAGCATCC
CTACCATCATTGTTTTCAAAGACGGAGAGAAGAAAGATGCAATCATTGGTGCGGTTCCCAAATCAACATTGTGTACCTGCATAGAGAAGTTCTTATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGGCGTTCTTGAGATCCTCACCGTTCCTCGCGCCTCCGGTGTACCGGCGTCTTCGATGTCTCGCATCGCCTCTTCTTCCGTCTCTCGGTTATCCGGCTGCCGGAATGCAGTAAAC
TTACCGGAATCCAGAGGTTTAAAGATCCGGTCATTCGCTTCTTCTGCATCAGTGAGCCTGAGGTCCAAAATCGGCCGCCGTACATGCCGTATTGTATGCGAGGCTCAAGATACAGCCGTA
CAAGTGCTTCCTGTTACTGATGCAACATGGCAATCACTAGTCCTAGAGTCTGATCTCCCTGTACTAGTTGAATTCTGGGCCCCATGGTGCGGGCCGTGTCGCATGATCCACCCTGTCATA
GATGAGCTGGCAAAGGAATACAACGGAAAACTCACTTGCTACAAAGTAAACACTGATGAGAGTCCTTCGATCGCGACCAAGTATGGAATCAGAAGCATCCCTACCATCATTGTTTTCAAA
GACGGAGAGAAGAAAGATGCAATCATTGGTGCGGTTCCCAAATCAACATTGTGTACCTGCATAGAGAAGTTCTTATAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCAAAAAGAG GCACGTGAGA AGCACGTGAG GTCTCATCCA CCAACAGTCA ATATCCCTCG GATAACCAAA CAAACTCCAT CCATCCCCCC AATCGCGTCT CTCTTCCATG GCCGGCGTTC  TTGAGATCCT CACCGTTCCT CGCGCCTCCG GTGTACCGGC GTCTTCGATG TCTCGCATCG CCTCTTCTTC CGTCTCTCGG TTATCCGGCT GCCGGAATGC AGTAAACTTA CCGGAATCCA  GAGGTTTAAA GATCCGGTCA TTCGCTTCTT CTGCATCAGT GAGCCTGAGG TCCAAAATCG GCCGCCGTAC ATGCCGTATT GTATGCGAGG CTCAAGATAC AGCCGTACAA GTGCTTCCTG  TTACTGATGC AACATGGCAA TCACTAGTCC TAGAGTCTGA TCTCCCTGTA CTAGTTGAAT TCTGGGCCCC ATGGTGCGGG CCGTGTCGCA TGATCCACCC TGTCATAGAT GAGCTGGCAA  AGGAATACAA CGGAAAACTC ACTTGCTACA AAGTAAACAC TGATGAGAGT CCTTCGATCG CGACCAAGTA TGGAATCAGA AGCATCCCTA CCATCATTGT TTTCAAAGAC GGAGAGAAGA  AAGATGCAAT CATTGGTGCG GTTCCCAAAT CAACATTGTG TACCTGCATA GAGAAGTTCT TATAGAGGTA TTATTATGTT TATACTTGTT CAACTTGAAT TTAGTGCCCT CTAGTTTGTT  TCAACTCTAT CAAGATTTTG AATTTTTAAG TATTTTGTTT CTATGTCAAG TTGATAGAAT TGGGAGTTTA GCTCGCACGC TAGGCTGATT TAAGTCTATT CGTTTTGGCT TGGTTATTCA  GCTATGTATG CGCCCTGCAG TGTATGTTTA TGTCATTCAA GGATAAAAAC CTTTTTAGAA ATTGTAAAAT GATAGCTGTG CTTCAACCTA ACTGCTGTTA TTAAAGTTCA TGAGGTTTAT  ATGAGAGCAT TTAATAGCGA ATCGATTTCA AGTTAAAAAA GTTGGATCAA AAAGCTAATA ACGGCGCCAT CTCCATCGCG CCATGGCAGC CATCTCCGGC CATAGCGCCC TGCGTTTCGG 
TGTGGGCGGC GCCATGGCGG CGCTATGGGG TGCCATACCG CCCCACTACG TATGCTCTTA GCTACATGCA ATTCAGTCAC GGAAAAGAGA TCAGGAATGT TAACCCA 

Retrieve as FASTA