View Redoxidase 14509

Entry information : HaTrxM04HanXRQChr11g0328441

Entry ID	14509
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaTrxM04HanXRQChr11g0328441

Name

HaTrxM04HanXRQChr11g0328441

Class

Thioredoxin Type M [Orthogroup: TrxM001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaTrxM04 start..stop	S start..stop
HaTrxM03	280	5.22e-98	1..185	1..185
HaTrxM01	256	5.35e-88	1..185	35..212
HaTrxM06	230	1.83e-78	1..185	1..163
ThasTrxM04-2	201	1.05e-66	1..185	1..191

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14509' 'join(32892848..32893091,32896329..32896642)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	32892848..32893091	242	N° 2	32896329..32896642	312
join(32892848..32893091,32896329..32896642)

Literature and cross-references HaTrxM04HanXRQChr11g0328441

DNA ref.	HanXRQ genome: HanXRQChr11 (32892848..32896642)

Protein sequence: HaTrxM04HanXRQChr11g0328441

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	185
PWM (Da):	19964.5
PI (pH):	9.03

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAALLETLTVPRATGFPAASLTPIASSPLAQLSVRRNSLPESRTSKLKINSFSSSGSVRLRSKFGRRGGRIVCEAQEAPVQVLPVTDGSWQSLVLDSELPVLVEFWAPWCGPCRMIHPII
DELAKEYNGKLACYKVNTDESPSIATNYGIRSIPTVIIFKDGEKKEAVIGAVPKSTLSTCIEKFL

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCGCCCTTCTCGAAACCCTAACCGTTCCTCGCGCCACCGGATTCCCCGCGGCTTCTCTAACTCCGATCGCCTCTTCTCCTCTCGCTCAACTCTCCGTTCGCCGGAACTCTCTGCCG
GAATCCAGAACCTCAAAGTTGAAGATCAATTCCTTCAGTTCTTCTGGATCTGTCAGATTGAGGTCGAAGTTCGGCCGTCGTGGCGGACGAATCGTCTGCGAAGCACAGGAAGCACCAGTA
CAAGAGGTTAGAATCGTTTTATTGTGTTGTTATTTTATGAAATTTGTGCTAAATTTGATTATATTATGCTTTCTAGACCTTCTGTAGCGAGCAGGTCTCTCGATTCTCGAATAATTGTTT
TGATTATTGTTTTCTGATTTTTAAATCTATGTTTGTTTGGCGATTGACATTCTAGGACTCTAGCACTAGCCATCACCACTTTGGTGGGTTGGTAGAGGCTTTGTGCCTCTTGCAGACAGA
CCAGGGTTCAATTCCTAGCATGGGGTAAAACTTGGTGTAATTTAGGAGTAGTGTTATGTAAGGATTCTAGCACTAATTTGTTGATGTTCTAATACTCGAATACATACACAGACATACAGT
GTTGTAATTGTATAGGAAGAACATGTTCATCTCGATTTGAAGCCACATTTATGTTTTCAGTGAAGTTCATAGTTGTTAATAGCGGCTATAGCGACCGGCCCTAAGCAGTCAATAGCGGTG
CTATAGCGGTTAGCGGACCTCAGGGTGTGTAGCGGTCCAAATAGCGGTGGCCTATAGCGGTTCCACTATTAGCGGCGCTAAATACCGCTATAGCGGTGCTATAGCGGTACTCTAGCGGTG
CTATAGCGGTGGCCTATAGCGGTTATAGCAATAACAGTGTTTGATTGTATTAATTCTTAGATAAAATACTTCAAAGTTACTATTAGTATTTGATTTGCAACGGGTTTTTGATAATGGAAT
GATATTACTATGAATTTTGATATTACTATTAATATTTTTCAAAGATATATTTATATAGGTAGAGGATCCTGTAAAAAGTGCTCAAAGTGTGAGAAGTGTATTGTAACACTATATATAATA
CTATATAACACCGTATAAACACCGTATAACAATATGTAACACCATATAATACCATATAACACTATATAACATTATATAACAAATATAACACTATAGTTTGTCTGATAGCATGTCTATGAT
AGATGTATAGTGTTATATTTGTTATATAATGTTATATAGTGTTACATAGTGTTATATGGTATCATATGGTGTTACATATTGTTATACGGTGTTTATATGGTGTTATATAGTATTATATAT
AGTGTTATAATACACTTCTCACACTTTAGGCCCTTTTTACACTATCCTTACCCTATTTATATATATATAAAAATACATAAATTATGCATGGTATAAAAATTACCGCTATATCACCGCTAT
GCCACCGCTATAACCTATATATCATATAGCGGACCTTGACCGCTATTCGATTTTGGACCGCTTTAACTGCATAGGCGACCGCCATAGCGCACTATGTAGCCATGCGACCAAGTGTCGCTA
TATGGGTCTTAGCGATCAATGGCGAACTTAGCGACAGTTAGGTATTTTTTTTTTTTGATGTTAATATCAATTAGATATAGCTATAAAATCGCTGGATTTATAGGTTTTTGTTAAATATAC
ATGTAAAATAGCATATATACAAGGGTATTTTGATGTAATATACATATAAAAATTTTCAAAATTCTTTTTCTAGTGTAATCGCTATTTATAAAATAGTCGTCGCTATTTGTCGCTATTCGC
TACGTAGCCTATAGGTGCCTTGTCGCTATTCGCTATCGACAACTATGGTGAAGTTGATATCTGTTTTGTTGGTTAAAACTTAAAATCAATGTAGTTATCATTTTTTCCTCTAAATGCTGA
AACGTATAGTTTTGGATCTGAATTAAATAGATCGGTTATACTTTACGTACCTATTGTAGCAAACTATGCAGTCAATAGCGCTTAGCGGACATACGAACTCATAGCGGTCCAAATAGCTGT
CCAAATAGCGGTCCCTTATAGCAGTCCCGCTATTAGCGGTGCTAAATTCCGCTATTGGACCGCTATTTTGAAACCCGTATAGCGGTCATAGCACTGCTTTTAGCGGTTTTTCTTATTTCA
GCCCAAAAGTAAGGTAAAGCCCACATTAATTAACTTTTTGTTTATAAATAAACCCAAAAGTAAAGGCCCAAACCCGAAATTAAACCTAAATTGAGACCAAAAGTCTTCATTCGTTGGTTC
TTCATCAGTTCATCATTCAACAAAATTAAACCTAAATCTCTAAATCGCTGGACTTCCTCAGTTAATGTTTTGAATTTTGATATTACTACTAATATTTTGCATGATAATATGATATTACTA
TAAATTTTGATATTATTATTAATTTTTTTCAGTATATATATTTATATACATATAAATACATAAAATATGCATGATATAAAAATTACCGCTATACCACAGCTATAACTTAGATATCATATA
GCGGACCTTGACTGCTATTTGATTTTGGACCGCTATAACTGCATAGGTAGCGAATAGGTTTTCTGATACTCGTTACGATTATTGTTTTTGGATTTTTGAACCTATTTTTGGTTAGCAATT
GACATTCTAGCACTGATTTGTTGGTGTCCTCATACTCGGATACGAATACAGTATTGTAATTGTATGTGAAAAACAAGAACATGCTCATCTCGAATCTTGATTTAAAGTCACATTTATGTT
TTCACTTTTCAGTGAAAGTGATATCTGTTTTGTTGATAAAAAATCAATGTAGTTATTATTTCATCCCGAATAGGTGAAAACAAACATATAGTTCTGGATCCTGAGTTATAACTCTCTTAG
ACATTTGTTTTTGCTGTTCTTAATTGATGGAATATCTTCGTATCGTGATGAATTTGAGAGTTGGCTAGACAAATTATCAATCAACCGTTAGATTTGATTAGCATTTGTTGTGCTAAAAGG
AGCTAGCATACATGTAGTGGTGTGAATACGCCGAGCCGAGCTAGACTCGTTTTGAGTTCTATTTCTAAAGCTCGAGCTCGTTTATTATTTGTTAATTTCGTTTATTATATATTAGTTACT
TTATGTACATTTATAATTATAACATTTATATAATAATATGTATTATTTAGTTTTTTTATATATAAATTTTTATGTATAACAATAGTTATCATATAAATATTTATTTAATATACTAAATAA
AAGTTATATAAATAATAGGCTGTATAGGCCCATGAACTAGCTTGAGCTCGATAAGTGAAGCTGGGGCTCGGGCTTGTTTATCAAACAAGCTTATTTTTAGGCTTGAGCTTGTTTTAGCTC
AGCTCAATTCGAGCATTTAATGAGCCGATCTCGAGTAGTCCACGAGCAACTTGGCTTGTTTACACCGCTATTTGTATTTGATGATTGTTGATGACCAACTGAAGTAAATTATTGAGATTG
CAGTACTTCCTGTGACTGATGGTTCATGGCAATCACTTGTTCTGGACTCTGAGCTTCCCGTACTGGTTGAATTTTGGGCTCCGTGGTGCGGGCCATGTCGCATGATCCACCCGATCATTG
ATGAGCTGGCGAAAGAATACAACGGCAAGCTCGCTTGTTACAAGGTGAACACTGATGAGAGTCCTTCAATCGCTACCAATTATGGTATAAGAAGCATTCCAACTGTCATTATCTTCAAAG
ATGGAGAGAAGAAAGAGGCAGTTATTGGCGCTGTTCCAAAATCTACTCTGTCTACCTGCATTGAAAAGTTTTTGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AAAGATTTGA AAGGTGCCAA GCACGTGACA CCTCATCCAT CCCACAATAA TCTCATCTCA CCAACACACA CCAGCCATTC ACACTCCCAC ACTCCTCCCC TCTCCATTAG TTTGTTAGTT TTCCGATGGC CGCCCTTCTC GAAACCCTAA CCGTTCCTCG CGCCACCGGA TTCCCCGCGG CTTCTCTAAC TCCGATCGCC TCTTCTCCTC TCGCTCAACT CTCCGTTCGC CGGAACTCTC TGCCGGAATC CAGAACCTCA AAGTTGAAGA TCAATTCCTT CAGTTCTTCT GGATCTGTCA GATTGAGGTC GAAGTTCGGC CGTCGTGGCG GACGAATCGT CTGCGAAGCA CAGGAAGCAC CAGTACAAGT ACTTCCTGTG ACTGATGGTT CATGGCAATC ACTTGTTCTG GACTCTGAGC TTCCCGTACT GGTTGAATTT TGGGCTCCGT GGTGCGGGCC ATGTCGCATG ATCCACCCGA TCATTGATGA GCTGGCGAAA GAATACAACG GCAAGCTCGC TTGTTACAAG GTGAACACTG ATGAGAGTCC TTCAATCGCT ACCAATTATG GTATAAGAAG CATTCCAACT GTCATTATCT TCAAAGATGG AGAGAAGAAA GAGGCAGTTA TTGGCGCTGT TCCAAAATCT ACTCTGTCTA CCTGCATTGA AAAGTTTTTG TAAGAGGTAC TGTCATCTGT ACATACTAGT TTTCACCAAT TTACTTCTCT TGTTTGTCTA GTCTATTTTG TCACAAACCA TGATCTTGTT CATTATATAT TATTCTCTCT TTTGTTTTCT TTAAAATCTG GGAAATCGTA CTTTATAGGC AAACCCGGGC TCTTACTAGT TTACCGAGGT TTAACCATGG TTGCAAAAGT CGCTAGGCGC TTCCTAGTCG GATTCGGGAG TGCTCGGCTT AGGCGGAGAT TACTCGGGGA GTAATTGGTC TGGGAGACCA
GTACTCGTGC CTCGGCAGCC TACCTTGTAG CGAGTACTCG GGGA

Retrieve as FASTA