Entry information : LsaPrx01
Entry ID 1451
Creation 2006-08-12 (Christophe Dunand)
Last sequence changes 2006-08-12 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2006-08-12
Peroxidase information: LsaPrx01
Name LsaPrx01
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx01
start..stop
S start..stop
LsePrx01 592 0 1..292 1..292
LvPrx01 579 0 5..292 1..288
HaPrx65 513 0 1..292 1..292
HaPrx44 513 0 1..292 1..292
Literature and cross-references LsaPrx01
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K.
Lettuce and Sunflower ESTs from the Compositae Genome Project
Unpublished (2002)

Cluster/Prediction ref. UniGene:   Lsa.8375
Protein sequence: LsaPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   292 (265)
PWM (Da):   %s   31623.21 (28732.7) Transmb domain:   %s   i7-25o
PI (pH):   %s   6.99 (7.34) Peptide Signal:   %s   cut: 28 range:28-292
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAGGMNLFGI FMLQIIVLSL FSLHAEGQGL KVGFYKKSCP QAGVIVSKVI SDVMAVAPSL SGPLLRMHFH DCFIRGCDGS VLLDSPTNQS EKFSPPNLSL RGFNIIDRVK LALEKACPDV  VSCADIVALV ARDVTVATKG PFWEVETGRR DGNVSLFIDP ITPVTGLPSF ASNISVLKQS WALRGLNTKD LVVLSGGHTI GISHCSSFDS RLYNFTGEGD TDPTMDPNYI ARLKLKCKPN 
DLTTFAELDP GSFKTFDDSY FKLVTKRRGL LQSDAALLDD PETRAYMIQA TS 

Retrieve as FASTA  
Remarks Partial sequence from 25 EST sequences (14 EST from TIGR TC12496 with a mix of cultivar). 3' sequence is missing.