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Entry information : HaCRX08HanXRQChr09g0241561
Entry ID 14550
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX08HanXRQChr09g0241561
Name HaCRX08HanXRQChr09g0241561
Class Other cupredoxin Protein    [Orthogroup: CRX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX08
start..stop		 S start..stop
HaCRX07 279 3.1e-97 1..191 1..193
HaCRX14 179 2.65e-57 1..129 1..132
HaCRX10 177 1.15e-56 9..130 9..130
HaCRX09 174 6.99e-56 8..191 7..186
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24696708..24696793 84 N° 2 24695935..24696424 488  
complement(join(24695935..24696424,24696708..24696793))


exon

Literature and cross-references HaCRX08HanXRQChr09g0241561
DNA ref. HanXRQ genome:   HanXRQChr09 (24696793..24695935)
Protein sequence: HaCRX08HanXRQChr09g0241561
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191 (165)
PWM (Da):   %s   19853.06 (17038.6)  
PI (pH):   %s   8.09 (6.92) Peptide Signal:   %s   cut: 27 range:27-191
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVLKSNMVVLVVMMVASFHLRSTVAQTRHVVGDALGWTIPSGGASTYATWASQQTFTVGDTLYFNFTTGMHNVAEVSQAAYRPCTTTNTLSLNPNGPATVTLTRPGTHYYICTVVSHCQIGQKLTINVSPLTATAPESTPLSPPSTI
ATPPSAFEPSPTGSVIPPPSSASPPLASVVPITFLAVALAFFY

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTACTGAAGTCAAATATGGTTGTATTGGTGGTCATGATGGTTGCATCTTTCCACCTGCGGTCCACGGTGGCGCAAACAAGGTATGTTTTGTATTAGGGGCTAGCTAAACCTACG
CAACCCTGATCAAATTATCATCGTACCCCACCCCTTAAAATATCAAATTAAGCTAGAGTATCTCTTTTGTCTTTTACGGTGAAAAAAAAAATTAAGGAATAGTTGTCTTTTACGTGACAA
CTGTATGAAAAGTAAAAACGAAGAGGGTGGGGTACGTTCAATAAGACCCTTCTATTATTGTAATCTAGTACATAATGTAGGTGCTTATATACTACTAAACATAATTGACATGATCTACTA
TAATAACAGGCGCACGTCGTTGGGGACGCCTTGGGGTGGACGATTCCTTCTGGCGGCGCTTCCACTTACGCCACTTGGGCTTCTCAACAAACCTTCACCGTCGGCGATACACTTTATTTT
AACTTTACCACTGGAATGCATAACGTGGCCGAAGTTTCTCAGGCGGCTTATCGCCCATGCACTACCACCAACACCCTCTCACTCAACCCTAACGGCCCCGCCACCGTTACATTGACCCGC
CCTGGGACCCACTACTATATTTGCACTGTTGTGAGTCATTGTCAAATTGGTCAGAAATTAACCATCAATGTCTCTCCCCTTACCGCCACTGCTCCTGAATCTACACCCCTATCTCCACCA
TCTACCATCGCTACTCCTCCGTCTGCCTTTGAACCATCTCCCACCGGCAGCGTCATTCCACCACCATCAAGCGCATCTCCACCTTTGGCCTCCGTGGTTCCCATCACTTTCTTGGCAGTT
GCTTTGGCTTTCTTTTACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTACTGAAGTCAAATATGGTTGTATTGGTGGTCATGATGGTTGCATCTTTCCACCTGCGGTCCACGGTGGCGCAAACAAGGCACGTCGTTGGGGACGCCTTGGGGTGGACGATT
CCTTCTGGCGGCGCTTCCACTTACGCCACTTGGGCTTCTCAACAAACCTTCACCGTCGGCGATACACTTTATTTTAACTTTACCACTGGAATGCATAACGTGGCCGAAGTTTCTCAGGCG
GCTTATCGCCCATGCACTACCACCAACACCCTCTCACTCAACCCTAACGGCCCCGCCACCGTTACATTGACCCGCCCTGGGACCCACTACTATATTTGCACTGTTGTGAGTCATTGTCAA
ATTGGTCAGAAATTAACCATCAATGTCTCTCCCCTTACCGCCACTGCTCCTGAATCTACACCCCTATCTCCACCATCTACCATCGCTACTCCTCCGTCTGCCTTTGAACCATCTCCCACC
GGCAGCGTCATTCCACCACCATCAAGCGCATCTCCACCTTTGGCCTCCGTGGTTCCCATCACTTTCTTGGCAGTTGCTTTGGCTTTCTTTTACTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCATCAAAGC ACCAACAATC TTGAGACAAT AATATAAGTG GCGACCTGAG TTTCAACACA ACAATATAAA AATGGCAGTA CTGAAGTCAA ATATGGTTGT ATTGGTGGTC ATGATGGTTG  CATCTTTCCA CCTGCGGTCC ACGGTGGCGC AAACAAGGCA CGTCGTTGGG GACGCCTTGG GGTGGACGAT TCCTTCTGGC GGCGCTTCCA CTTACGCCAC TTGGGCTTCT CAACAAACCT  TCACCGTCGG CGATACACTT TATTTTAACT TTACCACTGG AATGCATAAC GTGGCCGAAG TTTCTCAGGC GGCTTATCGC CCATGCACTA CCACCAACAC CCTCTCACTC AACCCTAACG  GCCCCGCCAC CGTTACATTG ACCCGCCCTG GGACCCACTA CTATATTTGC ACTGTTGTGA GTCATTGTCA AATTGGTCAG AAATTAACCA TCAATGTCTC TCCCCTTACC GCCACTGCTC  CTGAATCTAC ACCCCTATCT CCACCATCTA CCATCGCTAC TCCTCCGTCT GCCTTTGAAC CATCTCCCAC CGGCAGCGTC ATTCCACCAC CATCAAGCGC ATCTCCACCT TTGGCCTCCG  TGGTTCCCAT CACTTTCTTG GCAGTTGCTT TGGCTTTCTT TTACTAGATC AATTTGATTG AACGGAGACA GGGAGTTTTT ATTTTCTTGA TGTTTTTACC AATTTCTGAC CTTTTTGCTT 
ATTTGTTTTT ATCCATTGTA TTGTTTGTAC CCTCATATAT TCATGTAAGA AAGTTCACAT TATTGTATAT TTAATATTTT GAGGCCATGC CATGTGTTTC TTTTCATCAA AT 

Retrieve as FASTA