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Entry information : HaPNC11 (HanXRQChr11g0340411)
Entry ID 14576
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPNC11 (HanXRQChr11g0340411)
Name (synonym) HaPNC11 (HanXRQChr11g0340411)
Class Plantacyanin    [Orthogroup: PNC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPNC11
start..stop		 S start..stop
HaPNC22 249 7.74e-88 1..125 1..125
HaPNC20 249 7.74e-88 1..125 1..125
HaPNC12 249 7.74e-88 1..125 1..125
HaPNC16 242 1.03e-84 1..125 1..125
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14576' 'complement(join(111185004..111185203,111185369..111185546))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 111185369..111185546 176 N° 2 111185004..111185203 198  
complement(join(111185004..111185203,111185369..111185546))


exon

Literature and cross-references HaPNC11 (HanXRQChr11g0340411)
DNA ref. HanXRQ genome:   HanXRQChr11 (111185546..111185004)
Protein sequence: HaPNC11 (HanXRQChr11g0340411)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   125 (96)
PWM (Da):   %s   13046.62 (10106.2)  
PI (pH):   %s   9.98 (10.17) Peptide Signal:   %s   cut: 30 range:30-125
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKGRGSAMVSMAVLCLHVAALQCEIAQAATYAVGGNGGWTFNVS
GWENGKKFKAGDILVFNYQKGAHNVVVVNKAGYVGCSTTPRNAKVYTSGKDKIRLVKGLNSFICSLPDHCGAGMKIQISA

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGGGAAGAGGCAGTGCAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGTCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCCGGCTGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGGTATCATCTCAACATCCTATCACTAGTTTACTTGCTTAGTTCTTTTTATAGGTAGCAATTTC
AACCGATTTAGTTAACTTATTCTAAGTTCATTTAAAGTTTTAACAATAACAATAACAATAACAATAATAAATGGTTACTTAAAATGATTTTTGATGGGGACAGTGTGTTCAACTACCAAA
AAGGAGCACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGGTGTAGCACTACCCCAAGAAATGCAAAGGTTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAAGGTCTTA
ACAGCTTCATTTGTAGTCTACCTGATCACTGTGGTGCTGGCATGAAGATTCAAATCTCTGCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGGGAAGAGGCAGTGCAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGTCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCCGGCTGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGTGTTCAACTACCAAAAAGGAGCACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGG
TGTAGCACTACCCCAAGAAATGCAAAGGTTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAAGGTCTTAACAGCTTCATTTGTAGTCTACCTGATCACTGTGGTGCTGGCATGAAG
ATTCAAATCTCTGCTTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTCCATCTAT TGTTTAAGTG AACCATGGCT AAGGGAAGAG GCAGTGCAAT GGTGTCAATG GCTGTGCTAT GTCTACACGT GGCGGCACTT CAATGCGAGA TAGCTCAGGC AGCTACTTAT  GCCGTCGGCG GTAATGGTGG CTGGACGTTT AACGTCTCCG GCTGGGAAAA TGGCAAGAAG TTTAAGGCCG GCGACATCCT TGTGTTCAAC TACCAAAAAG GAGCACATAA TGTGGTGGTT  GTGAACAAGG CAGGGTATGT TGGGTGTAGC ACTACCCCAA GAAATGCAAA GGTTTACACA AGTGGTAAAG ATAAAATAAG GCTTGTAAAA GGTCTTAACA GCTTCATTTG TAGTCTACCT  GATCACTGTG GTGCTGGCAT GAAGATTCAA ATCTCTGCTT GATAAGCAAC AAAATAATGA GGAAAAGAAT TTGAAATCTC TAAACTTATA TGTATCAAGT GCTTCTTATG GTGGTTGTTA 
TATGGTATAA ATAAAAGAGT ATTTGACTTA AATTTAAGGC AG 

Retrieve as FASTA