Entry information : HaSTC31HanXRQChr17g0561371
Entry ID 14606
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC31HanXRQChr17g0561371
Name HaSTC31HanXRQChr17g0561371
Class Stellacyanin    [Orthogroup: STC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC31
start..stop
S start..stop
HaSTC34 532 0 1..263 1..263
HaSTC35 530 0 1..263 1..263
HaSTC32 529 0 1..263 1..263
HaSTC33 460 9e-167 1..263 1..261
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 158828952..158829120 169 N° 2 158829223..158829582 360 N° 3 158829667..158829929 263  
join(158828952..158829120,158829223..158829582,158829667..158829929)


exon

Literature and cross-references HaSTC31HanXRQChr17g0561371
DNA ref. HanXRQ genome:   HanXRQChr17 (158828952..158829929)
Protein sequence: HaSTC31HanXRQChr17g0561371
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   263 (239)
PWM (Da):   %s   29124.97 (26750.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.55 (9.45) Peptide Signal:   %s   cut: 25 range:25-263
Sequence 304
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATNKWGVIFVAATIAALATSVSAKLFTVGDEKGWTLNFDYQAWAKDKVFVVGDQLVFKYATGKHNVFRVNGTVFQQCIIPHTNEALTSGYDVITLATPGRKWYICGVGKHCEYGLKLFINVLPQSYPSPPPPPPPSVYPALSGKVFVVGDDKGWTLNFDYQAWAMGKKFYVGDKLVFRYPKGIHNVFRVDGTSFQQCIIPAAYEALTSGYDMITLQTPGRKWYICGVGKHCQMGLKLFINVLPYPTYVPPPYHGTRKLAPPS

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGTTGGACACTCAACTTCGATT
ATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
GTATGTGTCCTTTTACAATATGAGCATTATGTACTTCTGTACGATGGGTACTCGTGTTAGTAGGTGTTTATA
TAATAAATTCTGTATGCGTTATGTGTGTAGTTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATTCCACATACAAATGAAGCTC
TTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATATGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATCAACGTGCTTCCACAATCAT
ATCCTTCACCTCCCCCTCCACCTCCTCCATCGGTTTATCCAGCTCTTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGATTACCAAGCTTGGGCCATGG
GAAAGAAATTCTATGTCGGAGATAAGCTTG
GTGCATATTTATACTTATACAATATTTGTGTGAATCGAATGTTTTGATGCAGATTGCTAACTGGTTACAACTTTATTGTCACAGTTTTCA
GGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATTCCTGCTGCTTATGAAGCCCTCACCAGTGGATACGACATGATCACTTTACAAACCC
CGGGGAGGAAATGGTACATTTGTGGTGTTGGAAAACACTGCCAGATGGGGTTGAAGCTTTTCATCAATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAACAAGAAAAC
TCGCACCACCTAGTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGTTGGACACTCAACTTCGATT
ATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
TTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATTC
CACATACAAATGAAGCTCTTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATATGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATCA
ACGTGCTTCCACAATCATATCCTTCACCTCCCCCTCCACCTCCTCCATCGGTTTATCCAGCTCTTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGATT
ACCAAGCTTGGGCCATGGGAAAGAAATTCTATGTCGGAGATAAGCTTG
TTTTCAGGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATTC
CTGCTGCTTATGAAGCCCTCACCAGTGGATACGACATGATCACTTTACAAACCCCGGGGAGGAAATGGTACATTTGTGGTGTTGGAAAACACTGCCAGATGGGGTTGAAGCTTTTCATCA
ATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAACAAGAAAACTCGCACCACCTAGTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTA ACAAGTGGGG CGTCATCTTT GTCGCAGCAA CAATAGCAGC TTTAGCTACT TCAGTTTCGG CCAAGTTGTT TACTGTTGGT GACGAGAAAG GTTGGACACT CAACTTCGAT  TATCAAGCTT GGGCCAAAGA CAAGGTATTC GTTGTTGGAG ATCAACTCGT TTTCAAATAC GCTACTGGAA AACACAATGT CTTCAGAGTC AACGGAACTG TTTTCCAACA GTGCATCATT  CCACATACAA ATGAAGCTCT TACTAGTGGA TATGACGTGA TAACACTAGC AACTCCAGGA AGAAAATGGT ACATATGTGG AGTTGGCAAG CACTGTGAGT ATGGTTTGAA GCTTTTCATC  AACGTGCTTC CACAATCATA TCCTTCACCT CCCCCTCCAC CTCCTCCATC GGTTTATCCA GCTCTTTCAG GCAAAGTGTT TGTGGTTGGA GATGATAAAG GCTGGACCCT GAACTTTGAT  TACCAAGCTT GGGCCATGGG AAAGAAATTC TATGTCGGAG ATAAGCTTGT TTTCAGGTAC CCAAAGGGAA TACATAATGT ATTTAGAGTA GATGGAACTT CATTCCAGCA ATGTATCATT  CCTGCTGCTT ATGAAGCCCT CACCAGTGGA TACGACATGA TCACTTTACA AACCCCGGGG AGGAAATGGT ACATTTGTGG TGTTGGAAAA CACTGCCAGA TGGGGTTGAA GCTTTTCATC 
AATGTACTTC CCTATCCAAC ATATGTACCG CCTCCATACC ATGGAACAAG AAAACTCGCA CCACCTAGTT AA 

Retrieve as FASTA