Entry information : HaSTC34HanXRQChr17g0561431
Entry ID 14609
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC34HanXRQChr17g0561431
Name HaSTC34HanXRQChr17g0561431
Class Stellacyanin    [Orthogroup: STC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC34
start..stop
S start..stop
HaSTC35 536 0 1..263 1..263
HaSTC32 535 0 1..263 1..263
HaSTC31 532 0 1..263 1..263
HaSTC33 465 1e-168 1..263 1..261
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 158897511..158897679 169 N° 2 158897782..158898141 360 N° 3 158898226..158898488 263  
join(158897511..158897679,158897782..158898141,158898226..158898488)


exon

Literature and cross-references HaSTC34HanXRQChr17g0561431
DNA ref. HanXRQ genome:   HanXRQChr17 (158897511..158898488)
Protein sequence: HaSTC34HanXRQChr17g0561431
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   263 (239)
PWM (Da):   %s   29054.92 (26680.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.55 (9.45) Peptide Signal:   %s   cut: 25 range:25-263
Sequence 304
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATNKWGVIFVAATIAALATSVSAKLFTVGDEKGWTLNFDYQAWAKDKVFVVGDQLVFKYATGKHNVFRVNGTVFQQCIIPPTNEALTSGYDVITLATPGRKWYMCGVGKHCEYGLKLFINVLPQSYPSPPPPPPPSVYPAPSGKVFVVGDDKGWTLNFDYQAWAMGKKFYVGDKLVFRYPKGIHNVFRVDGTSFQQCIIPAAYEALTSGYDVITLQTPGRKWYICGVGKHCQMGLKLFINVLPYPTYVPPPYHGTRKLAPPS

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGATGGACACTCAACTTCGATT
ATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
GTATGTGTCCTTTTACAATATGAGCATTATGTACTTCTGTACGATGGGTATTCGTGTTAGTAGGTGTTTATA
TAATAAATTCTATATGCGTTATGTGTGTAGTTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATTCCTCCTACAAATGAAGCTC
TTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATGTGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATCAACGTGCTTCCACAATCAT
ATCCTTCACCTCCCCCTCCACCTCCTCCATCGGTTTATCCAGCTCCTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGATTACCAAGCTTGGGCCATGG
GAAAGAAATTCTATGTCGGAGATAAGCTTG
GTGCGTATTTATACTTATACAATATTTGTGTGAATCGAATGTTTTGATGCAGATTGCTAACTGGTTACAACTTTGTTGTCACAGTTTTCA
GGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATTCCTGCTGCTTATGAAGCCCTCACCAGTGGATACGACGTGATCACTTTACAAACCC
CGGGGAGGAAATGGTACATTTGTGGTGTGGGAAAACACTGCCAGATGGGGTTGAAGCTTTTTATCAATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAACAAGAAAAC
TCGCACCACCTAGTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGATGGACACTCAACTTCGATT
ATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
TTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATTC
CTCCTACAAATGAAGCTCTTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATGTGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATCA
ACGTGCTTCCACAATCATATCCTTCACCTCCCCCTCCACCTCCTCCATCGGTTTATCCAGCTCCTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGATT
ACCAAGCTTGGGCCATGGGAAAGAAATTCTATGTCGGAGATAAGCTTG
TTTTCAGGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATTC
CTGCTGCTTATGAAGCCCTCACCAGTGGATACGACGTGATCACTTTACAAACCCCGGGGAGGAAATGGTACATTTGTGGTGTGGGAAAACACTGCCAGATGGGGTTGAAGCTTTTTATCA
ATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAACAAGAAAACTCGCACCACCTAGTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTA ACAAGTGGGG CGTCATCTTT GTCGCAGCAA CAATAGCAGC TTTAGCTACT TCAGTTTCGG CCAAGTTGTT TACTGTTGGT GACGAGAAAG GATGGACACT CAACTTCGAT  TATCAAGCTT GGGCCAAAGA CAAGGTATTC GTTGTTGGAG ATCAACTCGT TTTCAAATAC GCTACTGGAA AACACAATGT CTTCAGAGTC AACGGAACTG TTTTCCAACA GTGCATCATT  CCTCCTACAA ATGAAGCTCT TACTAGTGGA TATGACGTGA TAACACTAGC AACTCCAGGA AGAAAATGGT ACATGTGTGG AGTTGGCAAG CACTGTGAGT ATGGTTTGAA GCTTTTCATC  AACGTGCTTC CACAATCATA TCCTTCACCT CCCCCTCCAC CTCCTCCATC GGTTTATCCA GCTCCTTCAG GCAAAGTGTT TGTGGTTGGA GATGATAAAG GCTGGACCCT GAACTTTGAT  TACCAAGCTT GGGCCATGGG AAAGAAATTC TATGTCGGAG ATAAGCTTGT TTTCAGGTAC CCAAAGGGAA TACATAATGT ATTTAGAGTA GATGGAACTT CATTCCAGCA ATGTATCATT  CCTGCTGCTT ATGAAGCCCT CACCAGTGGA TACGACGTGA TCACTTTACA AACCCCGGGG AGGAAATGGT ACATTTGTGG TGTGGGAAAA CACTGCCAGA TGGGGTTGAA GCTTTTTATC 
AATGTACTTC CCTATCCAAC ATATGTACCG CCTCCATACC ATGGAACAAG AAAACTCGCA CCACCTAGTT AA 

Retrieve as FASTA