Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
409 (377) |
| PWM (Da): |
42428.34 (38730.6) |
Transmb domain: |
i13-35o |
| PI (pH): |
6.65 (6.88) |
Peptide Signal: |
cut: 33 range:33-409 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEIMTWTHVD RSSVMFIFIG AMLFIAPPSC TADLVSTVVA TVLPSPPPPP TILQSPPPPP NPVSPPPPKF ASPPPPTAVS PPPPKAASPP PPTAISPPPP APPGLDPAYY SVSCPSATAW
VQNMTASIVA SDRTMAAALL RLHFHDCFVR GCDASVLLDS TPGNTAEKDS LANANSLRGF TQVDQVKAKL EEVCPGVVSC ADILALTARD AIVKIGGQSW VVYLGRKDGV VSVASESMSS
LPSPFATYTQ LVQGFAAVGL SEKDMVVLSG GHTIGTTKCG AFSQRLYGFS GPGAINGTDP TLDPEYAKVL KQQCPQNAPL NTVFLDPSGS FPGQTYDKGY FEAVKANKGV LASDAALLTS
SFGASLVAVE ASATSPFMTD FGVSMQKMGM AAAPKGAALQ VRKNCHFVN*
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Retrieve as FASTA
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| Remarks |
No EST found. Very long PS proline rich!!! |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTCGCATACA GTCTTCGAGA GCCCTTCTCA CTGATTCAGG TACCACTTTT CTGGGAGCAC TACGTCTAGT ATCTATATAC AGCTTGAGGG AGAAAGTTTG AGATTTGCTC GAAAACTCCT
TTGTGAAAAT CATCTCTCAT TCATGTTATT CTAATCCGCT TTGTGAACTT ATTAGTCTTC AAGGGTTTTC CTGTACCTAA AACGTAGATG TGACTCACCT CACAGAAGTT TGATTTTTTC
TGAATGATTC GCAAGAGTTT TCAGCTGCCT GAATCTTACA AAGACTTGAA GCAGGCCAAA TTTTAGAGCT TGATTAGAGT CGTTTCAAAG GATTATACTG GAGTACATGC TTTCAAGTTG
CGTGATTTGG AATAGCGACA CTCACGACTG TCGACTTCTC TTTAATACGT GGATTTTGGG CTGGACCAAA ATCCACCTAT GAAAGAGCAA GTAGTAAAGC TTAACTGGTT CCCTGACTTC
AATTGTTGTG TAGGAATCCA GCAATATAAT ATTGTCTCTG TCGACCCCAA TGGAGATCAT GACATGGACA CATGTGGATC GTTCGTCAGT AATGTTTATT TTTATCGGAG CTATGCTGTT
CATTGCACCT CCAAGCTGCA CAGCAGACCT TGTTAGTACT GTGGTGGCAA CAGTCCTACC GTCCCCGCCC CCACCACCAA CAATTCTTCA ATCACCACCA CCACCTCCCA ATCCAGTATC
ACCACCACCC CCGAAATTTG CTTCACCACC ACCTCCCACA GCAGTCTCAC CACCACCTCC CAAAGCAGCG TCACCACCAC CACCCACAGC AATCTCACCA CCTCCTCCAG CTCCTCCAGG
TCTGGACCCG GCATACTACT CTGTCAGCTG TCCGTCCGCA ACTGCCTGGG TGCAAAATAT GACGGCCAGT ATAGTTGCCA GTGACAGGAC CATGGCAGCT GCCCTGCTAA GGTTGCACTT
TCATGACTGC TTTGTTCGGG TACGTCATGA AGATGCGACA ACGTGCACAT CGTTTTCAAA TGACTTATCT CTTTTGAAAT AGTTGATGGT TTTCCAATTA AACATAAATC AATCATTCCA
GCATTTTATA GCTTAGCCTC CTTCTCGGCT CAGGAGCTCA CATCATCCGC TTCCGATCTG CAGGGATGCG ATGCATCTGT TCTCCTGGAC TCCACCCCTG GCAACACTGC CGAGAAGGAC
TCGCTGGCCA ATGCCAATTC CCTCAGAGGC TTTACTCAAG TCGATCAGGT GAAAGCCAAG CTGGAGGAAG TCTGTCCTGG TGTCGTCTCG TGTGCTGACA TCCTTGCTCT TACAGCTCGC
GACGCCATTG TGAAGGTAAT CCAGGAGTCA ACCTGGATGT AACGTTGGTC CCGAATTCCA CTTCAATGTC GATTCGAAAC ATGTTGAACT TTAACATTTC ATGAGGGCCT GCACCTTGCA
CATAATAAAA AATTCATGGT TTCGTGGTCT GTACAGATCG GAGGGCAATC ATGGGTGGTT TATCTCGGAA GGAAAGACGG CGTTGTTTCA GTTGCATCTG AATCAATGTC CAGCTTGCCT
TCTCCTTTCG CCACCTACAC GCAACTCGTC CAGGGCTTCG CCGCAGTCGG TCTGAGCGAG AAGGATATGG TGGTGCTTTC AGGTGAGAGG TCCTTGACGT CTAGCACTGG CGACCGAGTC
TGGAGTTACA GAAAGGAATT TGTGTCCGAG ACTGCTGTCC GAGCGTGATT TATTATCTAA CTTCCTGTCA TTTTTGCTGT AACATTTGCA GGTGGGCACA CCATAGGCAC AACCAAGTGC
GGAGCATTCT CCCAGCGCCT TTACGGCTTC TCGGGCCCTG GAGCAATCAA CGGGACGGAT CCGACTCTGG ATCCAGAGTA CGCCAAGGTG TTGAAGCAGC AGTGCCCACA AAATGCTCCC
CTGAACACGG TGTTCCTGGA CCCGTCAGGC AGCTTCCCCG GACAGACCTA CGACAAGGGA TACTTCGAGG CCGTGAAGGC GAACAAGGGC GTGCTGGCCT CTGATGCAGC TCTTCTGACC
AGCTCCTTCG GTGCGAGCCT GGTGGCTGTG GAAGCAAGCG CCACCTCTCC ATTCATGACA GACTTCGGAG TCTCCATGCA GAAAATGGGC ATGGCCGCTG CTCCAAAGGG AGCTGCGTTG
CAAGTCCGTA AGAACTGCCA TTTCGTGAAT TAGACAGGTG ACTCATGAAA AGGCTCGCCA CACAACTTTA ACTTACATCA GAGATTTGAA TCCACTAAGA AATGGACAAT TCAAGGTAGT
CCATCTTAAA CAAACTACTA CTTTCTGAGC GGAGCTAACA TTCTTCACCC ATGCACTTGT TTGCAAGGTG AATATGCAGG TCTAGTCGAC ATGTCCGACT ATCTAGATTC TTCTAGGGTA
GCCTAGAAGG CTACCCCAGA AGAAGATGAA TAATTGAATA GAGATCTGAC TGCAGGAAGC GCATTCTTCC CAGTTCAATA GCTCAGAAGT AGCATTTTGA AGTGATTAGT CACGACGATG
ATGAACCCAG TGCTTTGGTT CGAAGATAAA CATCAGGCAA CAGGAATGGT CAGATCCGAA GAACACACTT TAGCGAGAAA TCTCTTAAGT TTTGACATGC CAGCTAGTGG TATAGAGACG
AGATTGGTCT ACGACGAAAA ATACTCCTTG AGACCCCACG GTTTAATAAA GCTGGCAAAT TTTGCCCGAC GCAGGAGTTT TTTAACTTTG TCATTTTCAA ACCCCGATAT TGTCGCAAAC
TTGGATGGCG CTACATTGTT CGAAAAATCC TTGTAATCGA TAACT
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGATCA TGACATGGAC ACATGTGGAT CGTTCGTCAG TAATGTTTAT TTTTATCGGA GCTATGCTGT TCATTGCACC TCCAAGCTGC ACAGCAGACC TTGTTAGTAC TGTGGTGGCA
ACAGTCCTAC CGTCCCCGCC CCCACCACCA ACAATTCTTC AATCACCACC ACCACCTCCC AATCCAGTAT CACCACCACC CCCGAAATTT GCTTCACCAC CACCTCCCAC AGCAGTCTCA
CCACCACCTC CCAAAGCAGC GTCACCACCA CCACCCACAG CAATCTCACC ACCTCCTCCA GCTCCTCCAG GTCTGGACCC GGCATACTAC TCTGTCAGCT GTCCGTCCGC AACTGCCTGG
GTGCAAAATA TGACGGCCAG TATAGTTGCC AGTGACAGGA CCATGGCAGC TGCCCTGCTA AGGTTGCACT TTCATGACTG CTTTGTTCGG GGATGCGATG CATCTGTTCT CCTGGACTCC
ACCCCTGGCA ACACTGCCGA GAAGGACTCG CTGGCCAATG CCAATTCCCT CAGAGGCTTT ACTCAAGTCG ATCAGGTGAA AGCCAAGCTG GAGGAAGTCT GTCCTGGTGT CGTCTCGTGT
GCTGACATCC TTGCTCTTAC AGCTCGCGAC GCCATTGTGA AGATCGGAGG GCAATCATGG GTGGTTTATC TCGGAAGGAA AGACGGCGTT GTTTCAGTTG CATCTGAATC AATGTCCAGC
TTGCCTTCTC CTTTCGCCAC CTACACGCAA CTCGTCCAGG GCTTCGCCGC AGTCGGTCTG AGCGAGAAGG ATATGGTGGT GCTTTCAGGT GGGCACACCA TAGGCACAAC CAAGTGCGGA
GCATTCTCCC AGCGCCTTTA CGGCTTCTCG GGCCCTGGAG CAATCAACGG GACGGATCCG ACTCTGGATC CAGAGTACGC CAAGGTGTTG AAGCAGCAGT GCCCACAAAA TGCTCCCCTG
AACACGGTGT TCCTGGACCC GTCAGGCAGC TTCCCCGGAC AGACCTACGA CAAGGGATAC TTCGAGGCCG TGAAGGCGAA CAAGGGCGTG CTGGCCTCTG ATGCAGCTCT TCTGACCAGC
TCCTTCGGTG CGAGCCTGGT GGCTGTGGAA GCAAGCGCCA CCTCTCCATT CATGACAGAC TTCGGAGTCT CCATGCAGAA AATGGGCATG GCCGCTGCTC CAAAGGGAGC TGCGTTGCAA
GTCCGTAAGA ACTGCCATTT CGTGAATTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTCGCATACA GTCTTCGAGA GCCCTTCTCA CTGATTCAGG AATCCAGCAA TATAATATTG TCTCTGTCGA CCCCAATGGA GATCATGACA TGGACACATG TGGATCGTTC GTCAGTAATG
TTTATTTTTA TCGGAGCTAT GCTGTTCATT GCACCTCCAA GCTGCACAGC AGACCTTGTT AGTACTGTGG TGGCAACAGT CCTACCGTCC CCGCCCCCAC CACCAACAAT TCTTCAATCA
CCACCACCAC CTCCCAATCC AGTATCACCA CCACCCCCGA AATTTGCTTC ACCACCACCT CCCACAGCAG TCTCACCACC ACCTCCCAAA GCAGCGTCAC CACCACCACC CACAGCAATC
TCACCACCTC CTCCAGCTCC TCCAGGTCTG GACCCGGCAT ACTACTCTGT CAGCTGTCCG TCCGCAACTG CCTGGGTGCA AAATATGACG GCCAGTATAG TTGCCAGTGA CAGGACCATG
GCAGCTGCCC TGCTAAGGTT GCACTTTCAT GACTGCTTTG TTCGGGGATG CGATGCATCT GTTCTCCTGG ACTCCACCCC TGGCAACACT GCCGAGAAGG ACTCGCTGGC CAATGCCAAT
TCCCTCAGAG GCTTTACTCA AGTCGATCAG GTGAAAGCCA AGCTGGAGGA AGTCTGTCCT GGTGTCGTCT CGTGTGCTGA CATCCTTGCT CTTACAGCTC GCGACGCCAT TGTGAAGATC
GGAGGGCAAT CATGGGTGGT TTATCTCGGA AGGAAAGACG GCGTTGTTTC AGTTGCATCT GAATCAATGT CCAGCTTGCC TTCTCCTTTC GCCACCTACA CGCAACTCGT CCAGGGCTTC
GCCGCAGTCG GTCTGAGCGA GAAGGATATG GTGGTGCTTT CAGGTGGGCA CACCATAGGC ACAACCAAGT GCGGAGCATT CTCCCAGCGC CTTTACGGCT TCTCGGGCCC TGGAGCAATC
AACGGGACGG ATCCGACTCT GGATCCAGAG TACGCCAAGG TGTTGAAGCA GCAGTGCCCA CAAAATGCTC CCCTGAACAC GGTGTTCCTG GACCCGTCAG GCAGCTTCCC CGGACAGACC
TACGACAAGG GATACTTCGA GGCCGTGAAG GCGAACAAGG GCGTGCTGGC CTCTGATGCA GCTCTTCTGA CCAGCTCCTT CGGTGCGAGC CTGGTGGCTG TGGAAGCAAG CGCCACCTCT
CCATTCATGA CAGACTTCGG AGTCTCCATG CAGAAAATGG GCATGGCCGC TGCTCCAAAG GGAGCTGCGT TGCAAGTCCG TAAGAACTGC CATTTCGTGA ATTAGACAGG TGACTCATGA
AAAGGCTCGC CACACAACTT TAACTTACAT CAGAGATTTG AATCCACTAA GAAATGGACA ATTCAAGGTA GTCCATCTTA AACAAACTAC TACTTTCTGA GCGGAGCTAA CATTCTTCAC
CCATGCACTT GTTTGCAAGG TGAATATGCA GGTCTAGTCG ACATGTCCGA CTATCTAGAT TCTTCTAGGG TAGCCTAGAA GGCTACCCCA GAAGAAGATG AATAATTGAA TAGAGATCTG
ACTGCAGGAA GCGCATTCTT CCCAGTTCAA TAGCTCAGAA GTAGCATTTT GAAGTGATTA GTCACGACGA TGATGAACCC AGTGCTTTGG TTCGAAGATA AACATCAGGC AACAGGAATG
GTCAGATCCG AAGAACACAC TTTAGCGAGA AATCTCTTAA GTTTTGACAT GCCAGCTAGT GGTATAGAGA CGAGATTGGT CTACGACGAA AAATACTCCT TGAGACCCCA CGGTTTAATA
AAGCTGGCAA ATTTTGCCCG ACGCAGGAGT TTTTTAACTT TGTCATTTTC AAACCCCGAT ATTGTCGCAA ACTTGGATGG CGCTACATTG TTCGAAAAAT CCTTGTAATC GATAACT
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Retrieve as FASTA
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