1. Browse the Database
  2. View Redoxidase
Entry information : GhPrx04 (Pod4)
Entry ID 147
Creation 2006-06-23 (Christophe Dunand)
Last sequence changes 2006-06-23 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2007-02-28 (Christophe Dunand)
Peroxidase information: GhPrx04 (Pod4)
Name (synonym) GhPrx04 (Pod4)
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635 ]
Cellular localisation N/D
Tissue type Cotyledons
Inducer Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value GhPrx04
start..stop		 S start..stop
LePrx72 506 0 7..303 24..320
NtPrx84-1B 502 0 7..303 23..319
PatrPrx01 501 0 1..303 15..316
NtPrx84-1A 501 0 7..303 23..319
Literature and cross-references GhPrx04 (Pod4)
Literature Assigbetse,K., Cuny,G., Valette,C., Delannoy,E., Bresson,E.,Jalloul,A., Daniel,J.-F., Geiger,J.-P. and Nicole,M.
Cloning and Characterization of a Bacterial-Induced Peroxidase-Encoding cDNA from Cotton
Protein ref. UniProtKB:   Q9XGV6
mRNA ref. GenBank:   AF155124
Protein sequence: GhPrx04 (Pod4)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   303
PWM (Da):   %s   32209.02 Transmb domain:   %s   o387-409i544-566o570-592i
PI (pH):   %s   8.5
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLSCHAANAQ LSPNFYASSC PNLQTIVRNA MSRAVNRETR IGASILRLFF HDCFVNGCDG SILLDDTATF TGEKNAVPNR NSARGFEVID TIKTNVEAAC SATVSCADIL ALAARDGVAL  LGGPTWQVPL GRRDARTASQ SAANNQIPSP FANLATLTSS FAAKGLSTRD LTALSGGHTI GLARCTTFRG RIYNDTNIDA NFAATRRANC PASGGDNNLA PLDIQTPTRF DNDYFRNLVA 
RRGLLHSDQE LFNGGSQDAL VRTYSNNPAT FSADFAAAMV KMGNISPLTG TQGEIRRNCR VVN 

Retrieve as FASTA  
Remarks Complete sequene from mRNA. 2 week old cotyledons. Cultivar="Reba B50".