Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
325 (302) |
PWM (Da): |
35083.48 (32790.2) |
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PI (pH):
| 4.41 (4.40) |
Peptide Signal:
| cut: 24 range:24-325 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASTSPRSLI LLVLAVAVVV SDAQLQLSET FYDATCPQAA SIVQQKVDAF VDADRGLAAA LMRLHFHDCF VRGCDGSVLL NSTDTMLTEK EALLNKGSLR GFEQIDEIKM ELECACPGVV
SCADILALVA RDATAKVGGT SWPVFLGRID GGASFADEVN SSLPERTDNF TQLVARFARV GLDARDMVIL SGGHSIGQVH CGAFFERLYN FQGLNITDPS MDPEFAAMLK VQCPPTKPFG
FMALDATNGT FDSAYYLDLL TNKGLLESDV ALLSDPLGVE YAIRAVQDPM AFLNEFGWAM IKMGAIPALE PYGWRRHCAF VEPKY
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Retrieve as FASTA
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Remarks |
Complet sequence from genomic. Incorrect prediction from Phytozome (contains two partial and indentical Prxs: exons 1 + 2 + 3+start 4 and exons end 2+ 3 + 4). New annotation from MarPolBase |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCAGCCCGAG ATCGCTCATC TTGCTTGTGC TAGCGGTGGC AGTAGTTGTT TCTGATGCGC AGTTGCAGCT GTCAGAAACG TTTTATGATG CCACATGTCC ACAAGCCGCA
TCCATAGTCC AACAGAAGGT GGATGCGTTT GTAGATGCCG ATCGAGGACT GGCTGCAGCT TTGATGCGAC TTCATTTCCA CGACTGCTTC GTCCGGGTAA GAGGGATCCA CTGTTTTGGA
GACGCGGTGG ATTCAAGGAC CTGCTTAAAA GTTAATGACC TTTCAATACT TAGAGATGGC GTTTTCCCTT CTGAACGACA TAATATTGAT TGACTTGCAG GGTTGCGATG GGTCCGTCCT
TCTCAATTCT ACCGACACAA TGTTGACTGA GAAAGAAGCA TTGCTAAACA AAGGTTCGCT GCGAGGATTC GAGCAGATAG ACGAAATAAA GATGGAGCTC GAGTGCGCGT GCCCAGGTGT
GGTATCTTGT GCCGATATTT TGGCATTGGT TGCCCGAGAC GCCACTGCGA AGGTATGTGG TTTGAAAATT CACATTTCCA GGTATCCACT GCTATCGAAA CACTATATAG CAAAGGTTTT
AGATAATGTA TCTAAAACCT CGTAAGCTTC CAATAAGGAT TTACAGAGAA GCAAGATTGT ACCAAAAACA AAAGAAGCAT CAAGCACGAT ATTCTCAGAT TTTATGTAGA GGCTAACAAT
GTTTCAGTGC TCGAAAAACG ATGGATGACG TTTGTCCTAT ACACACACGA ACTTGCACTC GAAGGTATTC AGAAACAATA CGTGATCATT TGCAGGTTGG CGGCACCAGC TGGCCCGTGT
TCTTGGGCCG TATAGATGGA GGAGCTTCAT TCGCCGATGA GGTCAACAGT AGTTTACCTG AACGTACAGA CAACTTCACT CAACTCGTCG CCAGGTTCGC CCGAGTTGGA CTCGATGCCA
GAGACATGGT TATCCTATCA GGTAACTTGA CGAGTGCAAA ATTATATCTC TTGTGACGCT TCAGCTACAA AATACGATGT TGTTGATGTT ATGACGAATT TGAAGCCCTG CGCGCATAAA
ACTCGATGTC GGAGTGATAA AATTCATACT TTGTTGTCTT GGGCTTTGTC ACATTCTGGG GAAAAACTCG ATCAACTCTG AAACACATAC ATTACCTTAG ATATGAATTT AACGTAAAGC
GCACACACAC ACTATTTACT CTTTAGTCTC CATATTCACT TGTCTTTCCT CACAACATTC AATCTCCTGC AGGAGGACAC TCTATTGGAC AAGTTCACTG CGGCGCATTT TTCGAGCGCC
TCTACAACTT CCAGGGACTC AACATCACCG ATCCGTCCAT GGACCCTGAG TTCGCCGCCA TGCTCAAGGT CCAGTGCCCG CCGACCAAGC CCTTCGGATT CATGGCTCTG GACGCCACCA
ACGGCACCTT CGACTCCGCG TACTACTTGG ACCTGCTCAC GAACAAGGGC CTGCTGGAGT CCGACGTGGC GCTCTTGAGC GACCCTCTGG GCGTGGAATA TGCCATCAGA GCGGTGCAAG
ATCCCATGGC CTTCCTGAAC GAGTTCGGAT GGGCCATGAT CAAAATGGGC GCCATTCCTG CGCTCGAGCC CTACGGCTGG AGAAGACACT GCGCCTTCGT TGAACCCAAA TATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCAGCCCGAG ATCGCTCATC TTGCTTGTGC TAGCGGTGGC AGTAGTTGTT TCTGATGCGC AGTTGCAGCT GTCAGAAACG TTTTATGATG CCACATGTCC ACAAGCCGCA
TCCATAGTCC AACAGAAGGT GGATGCGTTT GTAGATGCCG ATCGAGGACT GGCTGCAGCT TTGATGCGAC TTCATTTCCA CGACTGCTTC GTCCGGGGTT GCGATGGGTC CGTCCTTCTC
AATTCTACCG ACACAATGTT GACTGAGAAA GAAGCATTGC TAAACAAAGG TTCGCTGCGA GGATTCGAGC AGATAGACGA AATAAAGATG GAGCTCGAGT GCGCGTGCCC AGGTGTGGTA
TCTTGTGCCG ATATTTTGGC ATTGGTTGCC CGAGACGCCA CTGCGAAGGT TGGCGGCACC AGCTGGCCCG TGTTCTTGGG CCGTATAGAT GGAGGAGCTT CATTCGCCGA TGAGGTCAAC
AGTAGTTTAC CTGAACGTAC AGACAACTTC ACTCAACTCG TCGCCAGGTT CGCCCGAGTT GGACTCGATG CCAGAGACAT GGTTATCCTA TCAGGAGGAC ACTCTATTGG ACAAGTTCAC
TGCGGCGCAT TTTTCGAGCG CCTCTACAAC TTCCAGGGAC TCAACATCAC CGATCCGTCC ATGGACCCTG AGTTCGCCGC CATGCTCAAG GTCCAGTGCC CGCCGACCAA GCCCTTCGGA
TTCATGGCTC TGGACGCCAC CAACGGCACC TTCGACTCCG CGTACTACTT GGACCTGCTC ACGAACAAGG GCCTGCTGGA GTCCGACGTG GCGCTCTTGA GCGACCCTCT GGGCGTGGAA
TATGCCATCA GAGCGGTGCA AGATCCCATG GCCTTCCTGA ACGAGTTCGG ATGGGCCATG ATCAAAATGG GCGCCATTCC TGCGCTCGAG CCCTACGGCT GGAGAAGACA CTGCGCCTTC
GTTGAACCCA AATATTAG
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Retrieve as FASTA
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