Entry information : HaPrx03 (HanXRQChr11g0325831)
Entry ID 1471
Creation 2005-08-11 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx03 (HanXRQChr11g0325831)
Name (synonym) HaPrx03 (HanXRQChr11g0325831)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx03
start..stop
S start..stop
HaPrx34 530 0 27..389 1..334
HaPrx14 462 4.08e-164 80..390 19..326
LePrx80 417 1.82e-146 86..389 26..325
CroPrx58 401 1.24e-139 63..388 24..359
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1471' 'join(24479140..24479541,24479854..24480048,24480169..24480334,24480797..24481206)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24479140..24479541 400 N° 2 24479854..24480048 193 N° 3 24480169..24480334 164 N° 4 24480797..24481206 408
join(24479140..24479541,24479854..24480048,24480169..24480334,24480797..24481206 )


exon

Literature and cross-references HaPrx03 (HanXRQChr11g0325831)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002). Genoplante
DNA ref. HanXRQ genome:   HanXRQChr11 (24479140..24481206)
EST ref. GenBank:   BQ966683 [3' end]
Cluster/Prediction ref. HanXRQ:   309  HanXRQChr11g0325831
Protein sequence: HaPrx03 (HanXRQChr11g0325831)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   390
PWM (Da):   %s   42533.49 Transmb domain:   %s   i30-47o
PI (pH):   %s   9.48
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MYAYIRCWKGRFKHTKHQVKEPTKGNMMKTILVFLVASILVIGCMGGKGHGHHHGHGHGHGHGHGHGHGQGRGHGRGHGHGLGGGLQVHYYQNRCGSMGWVEKTVKDIVWNKVAADPTLA
PKLLRLHYHDCFVR
GCDASILLDPTQNNTEAEKTARPNRSLSGYEVIDEIKTKLEAACPETVSCADILALATRDAVSFQFKREMWPVFTGRKDGRDSLASEVSENLPSANANFTTLLTQF
GNKKLNLNDLVTLS
GAHTIGHSRCALVSRRLYNFTGIGDADPSLDPAYAQTLRKLCPTPVNPSTSLEMDPKSSLTFDSDYYRALNKHKGLFVSDAALLTNRQSALVAQVLENPAIFFAQF
ARSMVKMGAVEVLTGGQGEVRKNCRVVNGK

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATGCCTATATAAGGTGTTGGAAGGGAAGGTTCAAACATACAAAACATCAAGTGAAAGAACCCACAAAGGGAAATATGATGAAAACCATTCTTGTATTTTTGGTTGCTTCCATTTTG
GTGATTGGGTGCATGGGTGGTAAAGGTCACGGTCACCATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCAGGGCCGCGGTCATGGTCGGGGCCATGGTCAT
GGTCTTGGTGGGGGTTTGCAGGTGCATTATTACCAGAACCGATGTGGTTCGATGGGTTGGGTTGAAAAGACTGTAAAGGATATCGTATGGAACAAAGTTGCTGCAGATCCTACCCTGGCT
CCCAAGCTTCTAAGGCTTCATTACCATGATTGTTTTGTCAGA
GAGTAAGTAATCAAATCATCTTAATGGGAATTTTATGTATTTGATTAATTAAACGTCAACGCGTTAGTGGTTAGCCTT
AAGTCATTTTGGCAAAGATCTTAGGTTCGAAATGGCTAGTTCTTATTGTCGGCGCAAGCTGATATTTACTTCATCTAATTGGTTAGCAAGGTCCTGTAGAGGCCTAGGGTCAGTGAGTTT
TCTGGTAACCAATTACTAAAAGAAAAATATATTTGATAATAAATCACTTTGAGCCCATTGTAGATTATTTGGAGCCAAAGTTCCACATTAGCAATAACTAACTTTTGAGCTTGTAGGGAT
GTGATGCATCAATTCTATTGGATCCTACTCAAAACAACACAGAGGCAGAAAAGACGGCTAGACCAAACAGATCTCTTTCTGGGTACGAGGTAATTGATGAAATAAAGACAAAGTTGGAAG
CCGCTTGTCCGGAAACTGTTTCATGTGCTGACATTCTTGCCTTGGCAACTAGAGATGCTGTTTCCTTCCAG
AGGTAAGTGATTTACACCAATGACCGAAATTTTCATGATCTTGAGTTTT
ATAACAAAGTAGCTACCGCTACGTACCTTATTTGTCGAACTCATGGTTTCATCGTCGTCATCGAAAATCGCAGTTTAAGAGAGAAATGTGGCCGGTTTTTACGGGAAGGAAAGACGGAAG
AGATTCGTTGGCATCGGAAGTCAGTGAGAATTTACCGTCTGCGAACGCCAACTTCACAACCCTCCTAACCCAATTTGGAAACAAAAAGCTTAACCTCAACGATCTTGTCACACTTTCGG
G
GGTATACATACTACTATGTATACATGTATGCATGTATATATGCAATATTTTGGATTAGTAGGTGTGTTTTGGAAGTCTGTTCGCTATCCTATAAGCAAAATCATGCAAGTTCTGACAATG
TCTTAGGAGTTCGATGGTATGGCAAGCGAAGTGGGAAAGTTTACACGGGTGACAAGCGAACACCATAGAGTTTTTCACCAAACTTAACCTCACCGTTGCGTATAGTTTTTTACCAAATTC
ATGGAGTTCGCTTGTGTCCAAGCGAACTTGTCGAATTCGCTTGAAGAGGTAGCGAATTTCCTAGAAAAAAATGCGTAGACATACTTAGTTGAATTAATCCTAATCCAACTACTAATCCAA
AAATATTTGTATATATGCACGTATGCATGCATGCATCTATATATATACTTCTTTTCTACACCATTTTGTGTTATGTAACTAACCTTTTTTTGTGATTAACTAGGGGCACACACAATTGGG
CACTCACGTTGTGCCTTAGTCTCCAGAAGACTTTACAACTTCACAGGAATAGGGGACGCTGACCCGTCTCTTGATCCGGCTTATGCACAAACATTGAGGAAACTATGCCCAACCCCAGTG
AACCCATCCACCAGTCTTGAAATGGATCCTAAAAGCTCTCTCACTTTCGACTCCGATTACTATCGCGCCTTAAATAAACATAAGGGTCTATTTGTATCCGATGCAGCATTACTCACGAAC
CGACAATCGGCTTTGGTGGCACAGGTTTTAGAAAACCCTGCGATATTCTTTGCTCAATTTGCTAGGTCCATGGTGAAAATGGGGGCTGTTGAAGTTCTTACAGGTGGTCAAGGAGAAGTT
AGGAAAAATTGTAGAGTTGTTAATGGTAAATGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATGCCTATATAAGGTGTTGGAAGGGAAGGTTCAAACATACAAAACATCAAGTGAAAGAACCCACAAAGGGAAATATGATGAAAACCATTCTTGTATTTTTGGTTGCTTCCATTTTG
GTGATTGGGTGCATGGGTGGTAAAGGTCACGGTCACCATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCAGGGCCGCGGTCATGGTCGGGGCCATGGTCAT
GGTCTTGGTGGGGGTTTGCAGGTGCATTATTACCAGAACCGATGTGGTTCGATGGGTTGGGTTGAAAAGACTGTAAAGGATATCGTATGGAACAAAGTTGCTGCAGATCCTACCCTGGCT
CCCAAGCTTCTAAGGCTTCATTACCATGATTGTTTTGTCAGA
GGATGTGATGCATCAATTCTATTGGATCCTACTCAAAACAACACAGAGGCAGAAAAGACGGCTAGACCAAACAGATCT
CTTTCTGGGTACGAGGTAATTGATGAAATAAAGACAAAGTTGGAAGCCGCTTGTCCGGAAACTGTTTCATGTGCTGACATTCTTGCCTTGGCAACTAGAGATGCTGTTTCCTTCCAG
TTT
AAGAGAGAAATGTGGCCGGTTTTTACGGGAAGGAAAGACGGAAGAGATTCGTTGGCATCGGAAGTCAGTGAGAATTTACCGTCTGCGAACGCCAACTTCACAACCCTCCTAACCCAATTT
GGAAACAAAAAGCTTAACCTCAACGATCTTGTCACACTTTCGG
GGGCACACACAATTGGGCACTCACGTTGTGCCTTAGTCTCCAGAAGACTTTACAACTTCACAGGAATAGGGGACGCT
GACCCGTCTCTTGATCCGGCTTATGCACAAACATTGAGGAAACTATGCCCAACCCCAGTGAACCCATCCACCAGTCTTGAAATGGATCCTAAAAGCTCTCTCACTTTCGACTCCGATTAC
TATCGCGCCTTAAATAAACATAAGGGTCTATTTGTATCCGATGCAGCATTACTCACGAACCGACAATCGGCTTTGGTGGCACAGGTTTTAGAAAACCCTGCGATATTCTTTGCTCAATTT
GCTAGGTCCATGGTGAAAATGGGGGCTGTTGAAGTTCTTACAGGTGGTCAAGGAGAAGTTAGGAAAAATTGTAGAGTTGTTAATGGTAAATGA

Retrieve as FASTA