1. Browse the Database
  2. View Redoxidase
Entry information : LsaPrx13
Entry ID 1474
Creation 2006-08-18 (Christophe Dunand)
Last sequence changes 2006-08-18 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx13
Name LsaPrx13
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx13
start..stop		 S start..stop
LsaPrx12 576 0 1..326 1..327
LsPrx13-2 556 0 1..282 1..283
LsPrx13-1 555 0 1..275 1..275
LsePrx13 514 0 1..290 1..291
Literature and cross-references LsaPrx13
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K.
Lettuce and Sunflower ESTs from the Compositae Genome Project
Unpublished (2002)

EST ref. GenBank:   BQ859456 [3' end]
Cluster/Prediction ref. UniGene:   Lsa.12870
Protein sequence: LsaPrx13
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (300)
PWM (Da):   %s   35109.91 (32220.3) Transmb domain:   %s   o10-32i
PI (pH):   %s   7.98 (7.97) Peptide Signal:   %s   cut: 27 range:27-326
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVFSHNKTP LFFLVLFASL ITLALGQTRV GFYQTSCPRV EAIVQSAVAA ANRANPGVPP GLVRMFFHDC FVNGCDASIL INGDGSERTA PPNTLLRGYE IIDAAKTQLE TECPGVVSCA  DILAIAARDS VLLAGGIARW QVPLGRRDGL VSRAADTTNL PAFNDAVDVQ IRKFAEKGLN TQDLVTLSGA HTLGTGACLV FSYRLYNFNN TNGPDPSIDP AFLTTLRNLC PNGGDSRRRV 
ALDTGSENRF DTSYFANLRS GRGVLESDQV LWGNPYRTLA QRFLGVSGLV GLTFNVEFAR SMVRMGNIEV KTGTQGEIRR VCSAFN 

Retrieve as FASTA  
Remarks Complete sequence from 4 ESTs and BQ859456+BQ860052 (3'end).