View Redoxidase 1476

Entry information : HaPrx06 (HanXRQChr05g0129531)

Entry ID	1476
Creation	2006-09-15 (Christophe Dunand)
Last sequence changes	2016-04-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx06 (HanXRQChr05g0129531)

Name (synonym)

HaPrx06 (HanXRQChr05g0129531)

Class

Class III peroxidase [Orthogroup: Prx012]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx06 start..stop	S start..stop
HargPrx01	666	0	1..328	1..328
HpPrx01-1	652	0	1..328	1..331
HaPrx07	652	0	1..328	1..331
SrPrx01	647	0	1..328	1..328

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2360641..2360862	220	N° 2	2360358..2360546	187	N° 3	2359436..2359601	164	N° 4	2358945..2359354	408
complement(join(2358945..2359354,2359436..2359601,2360358..2360546,2360641..2360 862))

Literature and cross-references HaPrx06 (HanXRQChr05g0129531)

Literature	REFERENCE 1 Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002). Genoplante. REFERENCE 2 Fernandez,P., et al., Differential representation of sunflower ESTs in enriched organ-specific cDNA libraries Unpublished (2002)
DNA ref.	HanXRQ genome: HanXRQChr05 (2360862..2358945)
EST ref.	GenBank: DY918683.1 [5' end] BQ971433.1 [3' end]
Cluster/Prediction ref.	HanXRQ: HanXRQChr05g0129531 UniGene: Han.2369

Protein sequence: HaPrx06 (HanXRQChr05g0129531)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	328 (307)
PWM (Da):	36882.15 (34575.8)
PI (pH):	8.7 (8.55)	Peptide Signal:	cut: 22 range:22-328

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPKALIFLALFSLLAIVSVADTDSDSGLVLNFYKDSCPQAEDIIREQVGLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRVLSEKETDRSFGLRNFRYLETIKEALERECPGV
VSCADILVLSGRDGIVALGGPYIPLKTGRRDGRRSRADILEQYLPDHNESMTVVLERFKSIGIDTPGVVALLGSHSVGRTHCVKLVHRLYPAVDPALDPGHVEHMLHKCPDAIPDPKAVQ
YVRNDRGTPMKLDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKHFGRAITILTENNPLTGTKGEIRKQCNVANKHH*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 23 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCGAAAGCTCTCATCTTCTTGGCTTTGTTCTCCCTGTTAGCCATTGTTTCAGTTGCAGACACTGACTCAGACTCAGGTCTTGTCCTCAACTTCTACAAAGATTCATGCCCACAA
GCTGAAGATATCATCAGAGAACAAGTTGGTCTTCTTTACAAACGCCACAAGAACACTGCTTTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTGAGGTATCCATGCATGCATCT
AATTCATAAATAATATCTATGAATGATTCATCCAAAAGGGTCTCAATATTTAACTGTTTTGATATATATAATATAGTCTCATGTGATGCTTCACTGCTTCTGGACTCAACAAGGAGGGTG
CTGTCTGAGAAAGAAACAGACAGGAGCTTTGGGCTCAGAAACTTTAGGTATCTTGAAACCATCAAGGAAGCTCTTGAGAGGGAGTGCCCTGGTGTTGTTTCTTGTGCAGATATTCTTGTG
CTTTCCGGAAGGGATGGCATTGTTGCGGTAAATTTTCTTCATTCTTAGATATTTTCCGTACTATGTAAAAATCTGGATTTATCTTTAGTCAGTACTTGTTTTAGTTATCATAGAAATGGA
AGGCAAACGGGCAACAAGCTGCACCGCTAGCCCTTTTTGAATGGCAAAACTAAGTTTTCTAAAAACAACATTTATAGATCTTAGGGTCATAACATAACTAACTATTCATAGATCGGTATG
CATTATCTTTAACGAACACGTGAAGCGTCATATGCTATGCGTTAGTTAGTTGTACTCATGGAGACCTAAGTTCAATTCCCATTAGTGCCACTTTGGTGGCCACCGACACCCGCTTTAAAG
CCGGACCGAGGACACTCGAGGTCTCGGGTTCGAAACATGTTTCTTACCCCTCTTTGATGGCTATGGGTATTTGCCGTCAGGGATCCTTGTCGGGTGGTGAACTGGGAAGGGAGATCCCTT
CCGCGGTCAGGGGTACCGTGCAACTACCCTTTTTTTAGTTAGTTGTACTCATGGTACTCCCTTGCATTAATGTATGCACTTTGTTTTGGATGTGTCCACTTCATGTTGTACTAGGTACAG
ATTTATGCTACTTTTCTTAATATTGATGTACACCATCAGAGTATTAGATTTGACAATCCTGCCCTCACAGTTACCACCAGTTTAACTTTGTTTTAGTGAAATTTAGAATGACTATGAAGA
TATTATTTATTTATGACAAATGTTGATTTGTGGGTGTAATTTGTTGATTATGATTTGTGGCAGCTCTTGGTGGGCCATACATACCTCTAAAAACAGGGAGAAGGGATGGTAGGAGGAGCA
GAGCTGATATCTTGGAGCAATATCTTCCAGATCATAATGAGAGCATGACTGTGGTTCTTGAAAGGTTCAAGAGCATTGGCATTGACACCCCTGGAGTTGTTGCTTTACTAGGTATGTATG
TGTATCATTATCATTATCATTATCAACCTCATGCATCATGCATGTAGTTTAACAGTGGTCTTCTTGAAATAGGTGTTCTCACAGTGTGGGTAGGACGCACTGCGTGAAGCTGGTGCACCG
CTTATATCCAGCGGTGGACCCTGCTCTTGACCCGGGCCATGTTGAGCACATGCTCCACAAGTGTCCGGATGCAATCCCTGACCCAAAGGCCGTGCAGTACGTGAGAAATGACCGCGGTAC
ACCGATGAAACTAGACAACAATTATTACAGGAACATTTTGGACAACAAGGGATTGTTGATTGTGGACCACCAATTGGCGAACGACAAGAGAACCAAACCATATGTGAAGAAAATGGCGAA
AAGCCAAGATTATTTCTTTAAACATTTTGGAAGAGCCATCACCATTCTTACAGAGAACAATCCACTCACTGGCACTAAAGGTGAGATTAGAAAGCAATGCAATGTTGCAAACAAGCACCA
TTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GCGGGGATCA CCAGTCACAG AGAGCAAAAT GGCTCCGAAA GCTCTCATCT TCTTGGCTTT GTTCTCCCTG TTAGCCATTG TTTCAGTTGC AGACACTGAC TCAGACTCAG GTCTTGTCCT CAACTTCTAC AAAGATTCAT GCCCACAAGC TGAAGATATC ATCAGAGAAC AAGTTGGTCT TCTTTACAAA CGCCACAAGA ACACTGCTTT CTCTTGGCTC AGAAACATCT TCCATGACTG TGCTGTTGAG TCATGTGATG CTTCACTGCT TCTGGACTCA ACAAGGAGGG TGCTGTCTGA GAAAGAAACA GACAGGAGCT TTGGGCTCAG AAACTTTAGG TATCTTGAAA CCATCAAGGA AGCTCTTGAG AGGGAGTGCC CTGGTGTTGT TTCTTGTGCA GATATTCTTG TGCTTTCCGG AAGGGATGGC ATTGTTGCGC TTGGTGGGCC ATACATACCT CTAAAAACAG GGAGAAGGGA TGGTAGGAGG AGCAGAGCTG ATATCTTGGA GCAATATCTT CCAGATCATA ATGAGAGCAT GACTGTGGTT CTTGAAAGGT TCAAGAGCAT TGGCATTGAC ACCCCTGGAG TTGTTGCTTT ACTAGGTTCT CACAGTGTGG GTAGGACGCA CTGCGTGAAG CTGGTGCACC GCTTATATCC AGCGGTGGAC CCTGCTCTTG ACCCGGGCCA TGTTGAGCAC ATGCTCCACA AGTGTCCGGA TGCAATCCCT GACCCAAAGG CCGTGCAGTA CGTGAGAAAT GACCGCGGTA CACCGATGAA ACTAGACAAC AATTATTACA GGAACATTTT GGACAACAAG GGATTGTTGA TTGTGGACCA CCAATTGGCG AACGACAAGA GAACCAAACC ATATGTGAAG AAAATGGCGA AAAGCCAAGA TTATTTCTTT AAACATTTTG GAAGAGCCAT CACCATTCTT ACAGAGAACA ATCCACTCAC TGGCACTAAA GGTGAGATTA GAAAGCAATG CAATGTTGCA AACAAGCACC ATTAATTAAT TAACCCAAGT TATCTTTTGT GTTTTAATTA ATGTGGAGAA TAAAAGAAGA TGGTGTGAGC
ATCTAGCAAT CTAGGACATG TATTTCCTTT TAACTTTnTA TGTGTTTTGA GAAAAGTGAA TGCTTCCCAA TGAATGTGAA TATGGATGGA TGGAGTCTGA GTGTGTATGA TGCATG

Retrieve as FASTA