Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
190 (162) |
| PWM (Da): |
21187.76 (18087.1) |
Transmb domain: |
i7-26o |
| PI (pH):
| 7.73 (6.76) |
Peptide Signal:
| cut: 29 range:29-190 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MANAKPFCLF GVFCLLLQLF SIFRIGNGEL EMNYYRESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG MRNFKYVKII KDALEKECPS
TVSCADIVAL SARDGIVMLK GPKIEMLKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT
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Retrieve as FASTA
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| Remarks |
Partial sequence from genomic. Exon 4 is missing due to scaffold border (small scaffold). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATTAAGTAGA AAAAGATAAG AGTGAAGAGA AGAGAGCAAT GGCCAATGCG AAGCCTTTTT GTCTCTTCGG GGTCTTTTGT CTGTTATTAC AGTTATTCTC CATCTTCCGT ATCGGTAAAT
ACATTCTTCC CTGATCTAAT CATGTTATGC CATGTGTCTC CATGCTTATC ATTTACCTAT AGACTTGTAA TGAATTTCTA ATTCACTAAT ACAATTTCCA CCGTTAAATT TCAACAAATA
CATCAACACA TCTACATAAA GTATATATTC TATAAACATT GTAGGAAATG GGGAATTGGA GATGAACTAT TACAGAGAAA GTTGTCCAAA AGCGGAAGAG ATTATAAGAC AACAAGTGGA
GACGCTTTAC TACAAACACG GCAACACAGC CGTATCTTGG CTCCGTAATC TCTTCCATGA CTGCGTCGTC AAGGTAATTA AATCCTTTTG ATAGTTTTAT AATTCACCAA AATTAATACG
ACAAAACTAT ATGTAGTATT ATTAACGTTC ATGTGTATTT TTTCTTATTT TGTAGTCGTG TGATGCGTCG CTGCTTCTAG AGACAGCGAG AGGTGTGGAA TCTGAGCAGA AATCGAAGAG
GAGTTTCGGT ATGAGAAACT TTAAGTACGT TAAGATTATC AAAGACGCAC TCGAGAAAGA GTGTCCTTCC ACAGTCTCTT GCGCTGATAT TGTCGCTCTC TCTGCTAGAG ACGGTATTGT
CATGGTGCGT TTAGGCAAAT TTTTACATGC ATTTTGGTTG GGAATTTTTT TGTATTTGTG GTAATCAATA TTTGGTGAAA TTATTAGCTG AAAGGGCCAA AGATAGAGAT GTTAAAGACA
GGAAGGAGAG ATAGCAGAGG GAGCTATTTG GGAGATGTTG AGACTCTAAT CCCTAACCAC AATGACTCTC TTTCCTCTGT TATATCCACC TTTAACTCCA TTGGTATCGA TGTCGAAGCC
ACC
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAATG CGAAGCCTTT TTGTCTCTTC GGGGTCTTTT GTCTGTTATT ACAGTTATTC TCCATCTTCC GTATCGGAAA TGGGGAATTG GAGATGAACT ATTACAGAGA AAGTTGTCCA
AAAGCGGAAG AGATTATAAG ACAACAAGTG GAGACGCTTT ACTACAAACA CGGCAACACA GCCGTATCTT GGCTCCGTAA TCTCTTCCAT GACTGCGTCG TCAAGTCGTG TGATGCGTCG
CTGCTTCTAG AGACAGCGAG AGGTGTGGAA TCTGAGCAGA AATCGAAGAG GAGTTTCGGT ATGAGAAACT TTAAGTACGT TAAGATTATC AAAGACGCAC TCGAGAAAGA GTGTCCTTCC
ACAGTCTCTT GCGCTGATAT TGTCGCTCTC TCTGCTAGAG ACGGTATTGT CATGCTGAAA GGGCCAAAGA TAGAGATGTT AAAGACAGGA AGGAGAGATA GCAGAGGGAG CTATTTGGGA
GATGTTGAGA CTCTAATCCC TAACCACAAT GACTCTCTTT CCTCTGTTAT ATCCACCTTT AACTCCATTG GTATCGATGT CGAAGCCACC
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATTAAGTAGA AAAAGATAAG AGTGAAGAGA AGAGAGCAAT GGCCAATGCG AAGCCTTTTT GTCTCTTCGG GGTCTTTTGT CTGTTATTAC AGTTATTCTC CATCTTCCGT ATCGGAAATG
GGGAATTGGA GATGAACTAT TACAGAGAAA GTTGTCCAAA AGCGGAAGAG ATTATAAGAC AACAAGTGGA GACGCTTTAC TACAAACACG GCAACACAGC CGTATCTTGG CTCCGTAATC
TCTTCCATGA CTGCGTCGTC AAGTCGTGTG ATGCGTCGCT GCTTCTAGAG ACAGCGAGAG GTGTGGAATC TGAGCAGAAA TCGAAGAGGA GTTTCGGTAT GAGAAACTTT AAGTACGTTA
AGATTATCAA AGACGCACTC GAGAAAGAGT GTCCTTCCAC AGTCTCTTGC GCTGATATTG TCGCTCTCTC TGCTAGAGAC GGTATTGTCA TGCTGAAAGG GCCAAAGATA GAGATGTTAA
AGACAGGAAG GAGAGATAGC AGAGGGAGCT ATTTGGGAGA TGTTGAGACT CTAATCCCTA ACCACAATGA CTCTCTTTCC TCTGTTATAT CCACCTTTAA CTCCATTGGT ATCGATGTCG
AAGCCACC
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Retrieve as FASTA
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