Entry information : HaPrx36 (HanXRQChr14g0441921)
Entry ID 1480
Creation 2005-08-11 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx36 (HanXRQChr14g0441921)
Name (synonym) HaPrx36 (HanXRQChr14g0441921)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx36
start..stop
S start..stop
HaPrx56 604 0 1..327 1..329
AanPrx01 596 0 1..327 1..328
LvPrx15 592 0 1..327 1..328
LsaPrx15 562 0 1..327 1..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1480' 'join(107653573..107653782,107653871..107654071,107654167..107654332,107654875..107655281)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 107653573..107653782 208 N° 2 107653871..107654071 199 N° 3 107654167..107654332 164 N° 4 107654875..107655281 405
join(107653573..107653782,107653871..107654071,107654167..107654332,107654875..1 07655281)


exon

Literature and cross-references HaPrx36 (HanXRQChr14g0441921)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002).
DNA ref. HanXRQ genome:   HanXRQChr14 (107653573..107655281)
EST ref. GenBank:   BU025062 [Fragment]
Cluster/Prediction ref. HanXRQ:   HanXRQChr14g0441921
Protein sequence: HaPrx36 (HanXRQChr14g0441921)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (304)
PWM (Da):   %s   35272.63 (32733.2) Transmb domain:   %s   o4-23i
PI (pH):   %s   8.91 (8.73) Peptide Signal:   %s   cut: 24 range:24-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGRVTFIQVFALSLLIFSNLAFAQLRQNYYANICPNVETIVRNAV
TAKVRQTFVTIPGTLRMFFHDCFVQ
GCDASVLIASSGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPACRNKVSCADILTMATRDVVVAAGGPSYAVELGRLDGLSSTAASVGGKLPKPNMNLDQLNAMFASHGLTQADMIA
LS
GAHTLGFSHCNQFTNRIYNFSKQNPVDPTLNPNYATQLQQQCPKNVDPRIAVNMDPNTPRKFDNVYYKNLQQGQGLFTSDQVLFTDSRSKQTVNAWASSSQAFNNAFVTAMTKLGRVG
VKTGQNGNIRRDCSAFN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCGGGTCACTTTTATTCAAGTATTTGCTCTTTCACTTCTCATCTTCTCAAACTTAGCTTTTGCTCAACTCAGACAAAACTACTACGCAAACATCTGCCCGAATGTGGAAACGATC
GTCCGCAACGCAGTCACAGCTAAGGTTCGCCAGACATTCGTCACCATCCCAGGAACTCTTCGCATGTTTTTCCACGATTGTTTCGTTCAG
AGGTTCGCTGATATTGTTTGTTGGTATTAA
ATACAATGCATTGATTAACGTTTAAGATTATAACGTGTTGTGTTTTGGGTTAATAAATAGGGGTGTGATGCTTCAGTTTTGATAGCATCAAGCGGGTCCAACACTGCAGAGAAAGATCAT
CCGGATAACCTGTCATTGGCTGGGGACGGGTTTGATACGGTTATCAAAGCGAAAGCTGCAGTTGATGCTGTCCCGGCTTGCAGAAATAAAGTGTCGTGTGCGGATATTCTCACCATGGCT
ACACGGGATGTTGTCGTGGCG
CGGTACTATTGTACTAATTGATACTTCATGTATTTAATAAACAGTTGAAGTAGTTTTGATAATGACATGTGATATAATGGTTGGTGGTTTTTTGCAGGC
AGGTGGGCCATCGTATGCGGTGGAGCTAGGAAGGTTAGACGGGCTGAGTTCAACGGCAGCTAGTGTGGGTGGGAAGCTTCCGAAACCAAACATGAATTTGGATCAACTTAATGCCATGTT
TGCTTCACATGGGTTGACCCAAGCCGACATGATTGCGCTCTCAG
AGGTAACAAGTTAATGCAGAAACAAACCGGAGTTGATAATAAATGGACTCCCATTGTAAAAGTGTCCATTTCGACC
CGTTGACTTATGAATTGCCTGATTTTAGTTACATTTTAACTCTAACGGGTAAAACAGTTAAACGAAGAATATCTATAAAGAAGTAGGTAAGATGGGTCACACCGGTCAATCGTTAGAGGT
GTATTTTTACCGTGTAAAACCTTCTAATTTTTTTTTACTAAAATAACAGATGGCTGCTAAAGTTCTAAAAAGTTATTTTTGTCGTGCAAAACCTTCTAAAACATTTTTACTAAAATATTA
GATTGCTGCTAAAGTTCTAAAAACGTTTTGTAATTATATTTACCACACTAATTTTTTTATTTTTTTTATTCGAGTGTTATGCTTTTTAAGAGAATAGAATGTGTTTCAGGTCAATCCATA
TTTTAATCCTTTTGGACCTTTTTTATGGGAATTTTAAAAACTATCATAAGGTATTTTATGGTTTCTTAAACATTTTATAAAAAACGCAACGTTAATTACGATGTCCAGGTGCACACACTC
TTGGATTCTCGCATTGCAACCAATTCACAAACAGGATATACAACTTCAGCAAGCAGAACCCGGTTGATCCAACTCTAAACCCAAATTATGCGACCCAATTGCAGCAACAGTGTCCAAAGA
ACGTTGACCCGCGGATAGCTGTAAACATGGATCCAAACACACCAAGAAAATTTGACAACGTGTACTACAAGAACCTGCAGCAAGGACAAGGATTATTTACTTCTGACCAGGTTCTCTTCA
CTGACTCAAGGTCAAAACAGACCGTGAACGCATGGGCCTCCAGCTCACAAGCTTTCAATAACGCGTTTGTTACAGCTATGACTAAACTAGGTCGGGTTGGAGTCAAGACGGGTCAAAATG
GAAATATCAGACGAGATTGTTCCGCATTTAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCGGGTCACTTTTATTCAAGTATTTGCTCTTTCACTTCTCATCTTCTCAAACTTAGCTTTTGCTCAACTCAGACAAAACTACTACGCAAACATCTGCCCGAATGTGGAAACGATC
GTCCGCAACGCAGTCACAGCTAAGGTTCGCCAGACATTCGTCACCATCCCAGGAACTCTTCGCATGTTTTTCCACGATTGTTTCGTTCAG
GGGTGTGATGCTTCAGTTTTGATAGCATCA
AGCGGGTCCAACACTGCAGAGAAAGATCATCCGGATAACCTGTCATTGGCTGGGGACGGGTTTGATACGGTTATCAAAGCGAAAGCTGCAGTTGATGCTGTCCCGGCTTGCAGAAATAAA
GTGTCGTGTGCGGATATTCTCACCATGGCTACACGGGATGTTGTCGTGGCG
GCAGGTGGGCCATCGTATGCGGTGGAGCTAGGAAGGTTAGACGGGCTGAGTTCAACGGCAGCTAGTGTG
GGTGGGAAGCTTCCGAAACCAAACATGAATTTGGATCAACTTAATGCCATGTTTGCTTCACATGGGTTGACCCAAGCCGACATGATTGCGCTCTCAG
GTGCACACACTCTTGGATTCTCG
CATTGCAACCAATTCACAAACAGGATATACAACTTCAGCAAGCAGAACCCGGTTGATCCAACTCTAAACCCAAATTATGCGACCCAATTGCAGCAACAGTGTCCAAAGAACGTTGACCCG
CGGATAGCTGTAAACATGGATCCAAACACACCAAGAAAATTTGACAACGTGTACTACAAGAACCTGCAGCAAGGACAAGGATTATTTACTTCTGACCAGGTTCTCTTCACTGACTCAAGG
TCAAAACAGACCGTGAACGCATGGGCCTCCAGCTCACAAGCTTTCAATAACGCGTTTGTTACAGCTATGACTAAACTAGGTCGGGTTGGAGTCAAGACGGGTCAAAATGGAAATATCAGA
CGAGATTGTTCCGCATTTAATTAA

Retrieve as FASTA