Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
233 |
PWM (Da): |
25989.36 |
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PI (pH):
| 9.67 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
RDSSINLSLP GDGFDVIVRA KTALELACPN TVSCSDIISV ATRDLLITVG GPYYDVFLGR RDSRTSKSSL LTDLLPLPST PISKIIQQFE SRGFNVQEMV ALSGAHSIGF SHCKEFVGRV
GRNNTGYNPR FAVALKKACA NYPKDPTISV FNDIMTPNKF DNMYYQNLKK GLGLLESDHG LYSDPRTRTF VDLYAKNQDL FFKDFARAMQ KLSLYGIKTG RRGEIRRRCD AIN*
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic (no intron). 5'end is missing due to scaffold border. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC
GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA
CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG
GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT
GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC
GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA
CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG
GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT
GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC
GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA
CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG
GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT
GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA
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Retrieve as FASTA
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