Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
218 (198) |
PWM (Da): |
24217.56 (21891.3) |
|
PI (pH):
| 11.33 (11.35) |
Peptide Signal:
| cut: 21 range:21-218 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRAITALFFL FCFVAPSALA QLRQGFYGRS CPRAESIVAN VVANRFRRDR SITAAFLRMQ FHDCFVRGCD ASLLIDPRPG RPSEKSTGPN ASVRGYEVID EAKRQLEAAC PRTVSCADIV
TLATRDSVAL AVFLDQRTPF TVDNAIYGEI RRQRGILRID QNLGLSGSTR GIVSSFASSN TLFRQRFAQA MVKMGTIRVL TGRSGEIRRN CRVFNNGR*
|
Retrieve as FASTA
|
|
Remarks |
Partial sequence from genomic. Fragment (exon 3) is missing due to N in the sequence. |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTATAACATT CACAGGAGAG GGAAGGAAAA GCTCATCATA CGAAATGAGG GCAATCACAG CTTTGTTTTT CCTTTTCTGT TTCGTTGCTC CCTCTGCTTT GGCGCAGCTC CGACAAGGGT
TCTACGGCCG CTCATGCCCT CGAGCTGAAT CTATCGTTGC TAATGTAGTT GCCAACCGTT TCCGCCGTGA CCGTTCCATC ACTGCTGCAT TTCTTCGTAT GCAGTTTCAT GATTGCTTTG
TCAGGGTTCG TAAGCTTCTC CTTGCATGTG TGTATATGTA TATCGTAAAC TAGTTATCAT CTAGACATAA CACTGATCAA GCTATGTTTT TAATGGTTGT GTAGGGTTGT GATGCTTCCC
TCTTGATCGA CCCAAGACCT GGAAGGCCAT CAGAGAAAAG CACTGGACCA AACGCAAGCG TGAGAGGCTA CGAGGTCATT GATGAGGCTA AGAGACAACT AGAGGCTGCA TGTCCCCGAA
CAGTCTCATG CGCAGACATT GTAACTCTAG CCACAAGAGA CTCGGTCGCT TTAGCCGGCG nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnCTAGGTT GAGGAACACA TGTCGTGCCC CAAATGACCC ATCAGTCTTT TTGGACCAAA GGACTCCATT TACTGTGGAT AACGCTATTT ATGGAGAGAT CCGAAGACAA AGAGGAATTC
TAAGAATTGA TCAAAACTTG GGTCTCTCTG GATCGACCCG TGGGATTGTG TCGAGTTTTG CATCAAGCAA TACACTCTTC AGACAGAGAT TTGCCCAAGC AATGGTGAAA ATGGGCACCA
TTAGGGTTCT CACTGGACGG TCTGGAGAGA TCAGGAGAAA CTGCAGAGTC TTCAACAACG GACGTTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGCAA TCACAGCTTT GTTTTTCCTT TTCTGTTTCG TTGCTCCCTC TGCTTTGGCG CAGCTCCGAC AAGGGTTCTA CGGCCGCTCA TGCCCTCGAG CTGAATCTAT CGTTGCTAAT
GTAGTTGCCA ACCGTTTCCG CCGTGACCGT TCCATCACTG CTGCATTTCT TCGTATGCAG TTTCATGATT GCTTTGTCAG GGGTTGTGAT GCTTCCCTCT TGATCGACCC AAGACCTGGA
AGGCCATCAG AGAAAAGCAC TGGACCAAAC GCAAGCGTGA GAGGCTACGA GGTCATTGAT GAGGCTAAGA GACAACTAGA GGCTGCATGT CCCCGAACAG TCTCATGCGC AGACATTGTA
ACTCTAGCCA CAAGAGACTC GGTCGCTTTA GCCGTCTTTT TGGACCAAAG GACTCCATTT ACTGTGGATA ACGCTATTTA TGGAGAGATC CGAAGACAAA GAGGAATTCT AAGAATTGAT
CAAAACTTGG GTCTCTCTGG ATCGACCCGT GGGATTGTGT CGAGTTTTGC ATCAAGCAAT ACACTCTTCA GACAGAGATT TGCCCAAGCA ATGGTGAAAA TGGGCACCAT TAGGGTTCTC
ACTGGACGGT CTGGAGAGAT CAGGAGAAAC TGCAGAGTCT TCAACAACGG ACGTTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTATAACATT CACAGGAGAG GGAAGGAAAA GCTCATCATA CGAAATGAGG GCAATCACAG CTTTGTTTTT CCTTTTCTGT TTCGTTGCTC CCTCTGCTTT GGCGCAGCTC CGACAAGGGT
TCTACGGCCG CTCATGCCCT CGAGCTGAAT CTATCGTTGC TAATGTAGTT GCCAACCGTT TCCGCCGTGA CCGTTCCATC ACTGCTGCAT TTCTTCGTAT GCAGTTTCAT GATTGCTTTG
TCAGGGGTTG TGATGCTTCC CTCTTGATCG ACCCAAGACC TGGAAGGCCA TCAGAGAAAA GCACTGGACC AAACGCAAGC GTGAGAGGCT ACGAGGTCAT TGATGAGGCT AAGAGACAAC
TAGAGGCTGC ATGTCCCCGA ACAGTCTCAT GCGCAGACAT TGTAACTCTA GCCACAAGAG ACTCGGTCGC TTTAGCCGTC TTTTTGGACC AAAGGACTCC ATTTACTGTG GATAACGCTA
TTTATGGAGA GATCCGAAGA CAAAGAGGAA TTCTAAGAAT TGATCAAAAC TTGGGTCTCT CTGGATCGAC CCGTGGGATT GTGTCGAGTT TTGCATCAAG CAATACACTC TTCAGACAGA
GATTTGCCCA AGCAATGGTG AAAATGGGCA CCATTAGGGT TCTCACTGGA CGGTCTGGAG AGATCAGGAG AAACTGCAGA GTCTTCAACA ACGGACGTTG A
|
Retrieve as FASTA
|
|