Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
224 |
| PWM (Da): |
23636.49 |
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| PI (pH):
| 4.19 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MFNHLLQAGG PSWAVLLGRR DGLTANLSGA NSLPSPFEGL NNITSKFVAV GLNTTDVVAL SGAHTFGRGQ CVAFNNRLFN FNGTGNPDPT LNSTLLSSLQ QLCPQNGSAS GITNLDLSTP
DAFDKYYFTN LQSNNGLLQS DQELFSNSGS ATVPIVNSFA SNQTLFFEAF VQSMIKMGNI SPLTGNSGEI RQDCKVVNGQ SSATEAEDIQ LQSDSDGPVS VADM*
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Retrieve as FASTA
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| Remarks |
Partial sequence from genomic. 5'end (exons 1 and 2) is missing due to scaffold border. Exon 3 is found two times!!! |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTTAATC ATCTTCTTCA GGCAGGAGGG CCTTCATGGG CTGTGTTATT AGGAAGAAGA GATGGTCTCA CTGCAAACTT GTCCGGAGCC AATTCTCTTC CCTCTCCCTT CGAAGGCCTT
AACAACATCA CATCTAAATT TGTAGCTGTC GGGCTAAATA CAACCGATGT AGTAGCCTTG TCTGGTAAAT CATATACATG TTCAAGAACT TGCAGCTTAA TTCAAACAAA ACCCTAATTA
ATGTCATTTC TGTTGTGGTT CAATATGCAT AGGAGCACAT ACGTTTGGGC GTGGTCAATG CGTAGCGTTC AACAATAGAC TATTCAACTT CAACGGGACA GGAAACCCCG ACCCGACTCT
GAACTCAACA CTTCTCAGCA GTCTTCAACA GCTATGTCCT CAAAACGGCA GCGCATCAGG GATCACCAAT CTCGATCTGA GCACACCTGA TGCGTTCGAT AAATATTACT TCACAAACCT
TCAGAGTAAC AATGGGCTTC TTCAGTCAGA CCAGGAACTG TTCTCCAACA GCGGTTCAGC CACCGTCCCG ATTGTTAATT CCTTTGCAAG TAACCAAACT CTGTTTTTTG AGGCGTTTGT
TCAGTCTATG ATCAAGATGG GGAACATAAG TCCATTGACT GGGAATAGTG GAGAGATTAG ACAAGATTGT AAGGTGGTCA ATGGACAGTC ATCAGCCACT GAAGCAGAGG ACATTCAGTT
ACAATCTGAC TCTGACGGAC CAGTGAGTGT AGCAGATATG TAAACAACGA TGGGATCAGT TTCACCGTTT GTTTATCATA TTATGAATAA ATTACTCCTA GGCTGAATCA TTTTTGTGAA
AAAAATAAGT TTGCTTGGGG AGAAAAAAAG TGAGTGGTAT GCTAAGTTTC ATGGGTTGTG TTTTACACTT GTGAAAATTT TAATATTTTA TAAACTTT
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTTAATC ATCTTCTTCA GGCAGGAGGG CCTTCATGGG CTGTGTTATT AGGAAGAAGA GATGGTCTCA CTGCAAACTT GTCCGGAGCC AATTCTCTTC CCTCTCCCTT CGAAGGCCTT
AACAACATCA CATCTAAATT TGTAGCTGTC GGGCTAAATA CAACCGATGT AGTAGCCTTG TCTGGAGCAC ATACGTTTGG GCGTGGTCAA TGCGTAGCGT TCAACAATAG ACTATTCAAC
TTCAACGGGA CAGGAAACCC CGACCCGACT CTGAACTCAA CACTTCTCAG CAGTCTTCAA CAGCTATGTC CTCAAAACGG CAGCGCATCA GGGATCACCA ATCTCGATCT GAGCACACCT
GATGCGTTCG ATAAATATTA CTTCACAAAC CTTCAGAGTA ACAATGGGCT TCTTCAGTCA GACCAGGAAC TGTTCTCCAA CAGCGGTTCA GCCACCGTCC CGATTGTTAA TTCCTTTGCA
AGTAACCAAA CTCTGTTTTT TGAGGCGTTT GTTCAGTCTA TGATCAAGAT GGGGAACATA AGTCCATTGA CTGGGAATAG TGGAGAGATT AGACAAGATT GTAAGGTGGT CAATGGACAG
TCATCAGCCA CTGAAGCAGA GGACATTCAG TTACAATCTG ACTCTGACGG ACCAGTGAGT GTAGCAGATA TGTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTTAATC ATCTTCTTCA GGCAGGAGGG CCTTCATGGG CTGTGTTATT AGGAAGAAGA GATGGTCTCA CTGCAAACTT GTCCGGAGCC AATTCTCTTC CCTCTCCCTT CGAAGGCCTT
AACAACATCA CATCTAAATT TGTAGCTGTC GGGCTAAATA CAACCGATGT AGTAGCCTTG TCTGGAGCAC ATACGTTTGG GCGTGGTCAA TGCGTAGCGT TCAACAATAG ACTATTCAAC
TTCAACGGGA CAGGAAACCC CGACCCGACT CTGAACTCAA CACTTCTCAG CAGTCTTCAA CAGCTATGTC CTCAAAACGG CAGCGCATCA GGGATCACCA ATCTCGATCT GAGCACACCT
GATGCGTTCG ATAAATATTA CTTCACAAAC CTTCAGAGTA ACAATGGGCT TCTTCAGTCA GACCAGGAAC TGTTCTCCAA CAGCGGTTCA GCCACCGTCC CGATTGTTAA TTCCTTTGCA
AGTAACCAAA CTCTGTTTTT TGAGGCGTTT GTTCAGTCTA TGATCAAGAT GGGGAACATA AGTCCATTGA CTGGGAATAG TGGAGAGATT AGACAAGATT GTAAGGTGGT CAATGGACAG
TCATCAGCCA CTGAAGCAGA GGACATTCAG TTACAATCTG ACTCTGACGG ACCAGTGAGT GTAGCAGATA TGTAAACAAC GATGGGATCA GTTTCACCGT TTGTTTATCA TATTATGAAT
AAATTACTCC TAGGCTGAAT CATTTTTGTG AAAAAAATAA GTTTGCTTGG GGAGAAAAAA AGTGAGTGGT ATGCTAAGTT TCATGGGTTG TGTTTTACAC TTGTGAAAAT TTTAATATTT
TATAAACTTT
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Retrieve as FASTA
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