Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
130 (108) |
PWM (Da): |
13592.68 (11126.4) |
Transmb domain: |
i2-24o |
PI (pH):
| 5.54 (4.96) |
Peptide Signal:
| cut: 23 range:23-130 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGLVRFFCSF LVFLSCLIAV YGQGTRIGFY STTCPNAETI VQTTVASHFG SDPRVAPGLL RMHNHDCFVQ GCDGSVLLSG PNSERTAGAN VNLRGFEVID DAKTQLEAAC PGVVSCADIL
ALAARDSVAL
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. 3'end is missing due to scaffold border. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTAACTCGA AACACACTTG AGACCTTATC TAAAACACAA ACCAACAAAA GGAAAAAATG GGTTTGGTCC GATTCTTTTG TTCGTTCCTA GTCTTCCTTA GTTGTCTCAT CGCGGTTTAT
GGTCAAGGTA CGAGGATCGG GTTCTACTCG ACCACGTGCC CCAATGCCGA GACGATTGTT CAGACCACTG TGGCATCTCA CTTTGGTTCA GATCCAAGGG TTGCACCGGG GTTACTGAGA
ATGCACAACC ATGATTGCTT TGTCCAAGGT TGTGATGGTT CAGTGCTTTT ATCAGGACCT AACTCTGAAA GAACCGCTGG CGCAAACGTT AACCTTCGTG GTTTTGAGGT CATTGACGAT
GCCAAGACGC AGCTCGAGGC GGCATGTCCT GGTGTTGTCT CTTGTGCTGA TATCTTAGCC TTGGCGGCTC GTGATTCCGT TGCTCTC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTTTGG TCCGATTCTT TTGTTCGTTC CTAGTCTTCC TTAGTTGTCT CATCGCGGTT TATGGTCAAG GTACGAGGAT CGGGTTCTAC TCGACCACGT GCCCCAATGC CGAGACGATT
GTTCAGACCA CTGTGGCATC TCACTTTGGT TCAGATCCAA GGGTTGCACC GGGGTTACTG AGAATGCACA ACCATGATTG CTTTGTCCAA GGTTGTGATG GTTCAGTGCT TTTATCAGGA
CCTAACTCTG AAAGAACCGC TGGCGCAAAC GTTAACCTTC GTGGTTTTGA GGTCATTGAC GATGCCAAGA CGCAGCTCGA GGCGGCATGT CCTGGTGTTG TCTCTTGTGC TGATATCTTA
GCCTTGGCGG CTCGTGATTC CGTTGCTCTC
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTAACTCGA AACACACTTG AGACCTTATC TAAAACACAA ACCAACAAAA GGAAAAAATG GGTTTGGTCC GATTCTTTTG TTCGTTCCTA GTCTTCCTTA GTTGTCTCAT CGCGGTTTAT
GGTCAAGGTA CGAGGATCGG GTTCTACTCG ACCACGTGCC CCAATGCCGA GACGATTGTT CAGACCACTG TGGCATCTCA CTTTGGTTCA GATCCAAGGG TTGCACCGGG GTTACTGAGA
ATGCACAACC ATGATTGCTT TGTCCAAGGT TGTGATGGTT CAGTGCTTTT ATCAGGACCT AACTCTGAAA GAACCGCTGG CGCAAACGTT AACCTTCGTG GTTTTGAGGT CATTGACGAT
GCCAAGACGC AGCTCGAGGC GGCATGTCCT GGTGTTGTCT CTTGTGCTGA TATCTTAGCC TTGGCGGCTC GTGATTCCGT TGCTCTC
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Retrieve as FASTA
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