Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
170 (144) |
PWM (Da): |
18955.1 (15976.5) |
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PI (pH):
| 7.5 (7.46) |
Peptide Signal:
| cut: 27 range:27-170 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MHVLSLSLSS IFFYLFLTST IPISPAKLTI SQPPALRRLH HIELSGDYYS KKCPQLENLV GSVTSQRFKE APISAPATIR LFFHDCFVEG CDGSILIETK KGSKKLAERE AYENKELREE
GFESIIKAKA LVESHCPSLV SCSDILAIAA RDFIHLVIPT SILFLIVLFI *
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. 3'end is missing due to N in the sequence. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGTCACTCTA CTTGTTTGTC ACTTATATGA GCATTGACTT AGGTTGTTTT TTTGTCATTA TTTTGAACAG TACCAAAAAA CTGTAAACTA TTTATTAGTT TGTCCAGACG CACATCTCAC
AACCCCACCA TGCATGTCCT ATCTCTTTCT TTATCCTCAA TATTTTTTTA TCTCTTCCTC ACATCAACCA TTCCTATTTC TCCGGCGAAA CTAACAATCT CTCAGCCTCC GGCACTAAGG
CGCCTCCACC ACATAGAGCT CTCCGGCGAT TACTACTCCA AGAAATGTCC TCAGCTCGAA AATCTCGTCG GTTCCGTCAC TTCTCAGCGG TTCAAAGAAG CCCCCATCTC AGCTCCAGCC
ACCATTCGCC TCTTCTTTCA CGACTGCTTC GTTGAGGTTT AATTCTACCA AATTTTTACA TTATTTTTCT TACTCCAGCG CACTATAGCA TTAACCATAA ACAACAACAC GCATTTTAGC
ATTAGTAnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnGTAG TTTAGCAAAC AACAGTCAAG ATTCGGTGCA TTTTAGCGAA AAAACTCAAA
ACAGTATTTT GGCCTGCATC GTTGTTTGTT TAACAAATAA CACTACACAT CTCATGCATG AAAAACTAAT AAATTATGGA CTATGATTAT TGATAATCAA CATAAGTTGA AATTGAAATT
TTGAAGGGTT GTGATGGGTC GATATTGATA GAAACAAAGA AAGGAAGCAA GAAATTAGCA GAAAGAGAAG CATATGAGAA TAAAGAATTG AGAGAAGAAG GATTCGAGAG TATTATTAAG
GCAAAGGCAT TGGTCGAGTC TCATTGCCCT TCTCTCGTCT CTTGCTCTGA TATTCTCGCT ATCGCCGCTC GAGATTTCAT CCACCTGGTA ATCCCAACTT CAATCCTATT TCTAATTGTT
CTATTCATAT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCATGTCC TATCTCTTTC TTTATCCTCA ATATTTTTTT ATCTCTTCCT CACATCAACC ATTCCTATTT CTCCGGCGAA ACTAACAATC TCTCAGCCTC CGGCACTAAG GCGCCTCCAC
CACATAGAGC TCTCCGGCGA TTACTACTCC AAGAAATGTC CTCAGCTCGA AAATCTCGTC GGTTCCGTCA CTTCTCAGCG GTTCAAAGAA GCCCCCATCT CAGCTCCAGC CACCATTCGC
CTCTTCTTTC ACGACTGCTT CGTTGAGGGT TGTGATGGGT CGATATTGAT AGAAACAAAG AAAGGAAGCA AGAAATTAGC AGAAAGAGAA GCATATGAGA ATAAAGAATT GAGAGAAGAA
GGATTCGAGA GTATTATTAA GGCAAAGGCA TTGGTCGAGT CTCATTGCCC TTCTCTCGTC TCTTGCTCTG ATATTCTCGC TATCGCCGCT CGAGATTTCA TCCACCTGGT AATCCCAACT
TCAATCCTAT TTCTAATTGT TCTATTCATA TGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGTCACTCTA CTTGTTTGTC ACTTATATGA GCATTGACTT AGGTTGTTTT TTTGTCATTA TTTTGAACAG TACCAAAAAA CTGTAAACTA TTTATTAGTT TGTCCAGACG CACATCTCAC
AACCCCACCA TGCATGTCCT ATCTCTTTCT TTATCCTCAA TATTTTTTTA TCTCTTCCTC ACATCAACCA TTCCTATTTC TCCGGCGAAA CTAACAATCT CTCAGCCTCC GGCACTAAGG
CGCCTCCACC ACATAGAGCT CTCCGGCGAT TACTACTCCA AGAAATGTCC TCAGCTCGAA AATCTCGTCG GTTCCGTCAC TTCTCAGCGG TTCAAAGAAG CCCCCATCTC AGCTCCAGCC
ACCATTCGCC TCTTCTTTCA CGACTGCTTC GTTGAGGGTT GTGATGGGTC GATATTGATA GAAACAAAGA AAGGAAGCAA GAAATTAGCA GAAAGAGAAG CATATGAGAA TAAAGAATTG
AGAGAAGAAG GATTCGAGAG TATTATTAAG GCAAAGGCAT TGGTCGAGTC TCATTGCCCT TCTCTCGTCT CTTGCTCTGA TATTCTCGCT ATCGCCGCTC GAGATTTCAT CCACCTGGTA
ATCCCAACTT CAATCCTATT TCTAATTGTT CTATTCATAT GA
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Retrieve as FASTA
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