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Entry information : CagraPrx04Cagra.6254s0028
Entry ID 14850
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CagraPrx04Cagra.6254s0028
Name CagraPrx04Cagra.6254s0028
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx04
start..stop		 S start..stop
CrubPrx78 608 0 8..311 8..311
AtPrx57 600 0 3..310 6..313
BrPrx57-1Aa_other 599 0 1..311 1..311
AlyPrx57 593 0 3..310 6..313
Literature and cross-references CagraPrx04Cagra.6254s0028
Protein sequence: CagraPrx04Cagra.6254s0028
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   310 (291)
PWM (Da):   %s   33907.37 (31590.1) Transmb domain:   %s   i7-26o
PI (pH):   %s   10.79 (10.71) Peptide Signal:   %s   cut: 20 range:20-310
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMKFSSLLVL FFIFPIAFAQ LRVGFYSQSC PQAETIVRNL VRQRFGVDPT VTAALLRMHF HDCFVRGCDA SLLIDGTNSE KTAGPNGSVR EFDLIDRIKA QLEAACPSTV SCADIVTLAT  RDSVALAGGP SYSIPTGRRD GRVSNNVDVA LPGPTISVSG AVSFFTVKGM NTFDAVALLG AHTVGRGNCG LFSDRITNFQ GSGRPDPSMD PALVTSLRNT CRNSASAALD QSTPLRFDNQ 
FFKQIRKRRG VLQVDQRLAS DRQTRGIVAR YANNNAFFKR QFVRAMVKMG AVDVLTGRNG EIRRNCRRFN * 

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAAGT TTTCTTCTCT TCTTGTGCTT TTCTTTATTT TCCCGATAGC ATTTGCTCAA CTTAGAGTCG GGTTCTATAG CCAGTCATGC CCACAAGCCG AGACTATCGT ACGCAACCTG  GTGCGCCAAC GGTTTGGTGT TGACCCAACC GTCACCGCCG CTTTGCTCCG TATGCATTTC CACGACTGTT TCGTTAGGGT AAGAATCTAA TATAGCAATT TTGATATAGC TCAACATGTC  CAGGGAACGG TTTAACAAAT CTGTTGCTCA AAGTGGCTTA AACCTGTATA GCTTTTAACT TTAAGTTCTT AAGTTAAACT TGTATAGCTT TTAATTTTGA GACAAGAACA TATGCGGAAA  AAAAGACCAA AAATATTATC ATTCAAATTT GAGACTCAAG ATAAACTATA TTGCATACTT GTATATTAAA TGCATATGTT AAGAAATACT CATAAATTTA AGCAAATTTC ATATCATTTT  GTCTGGCTAA TCTTATTTTA ATATATTTTT TTTGGTAGGG TTGTGACGCA TCTCTCCTCA TTGATGGAAC CAATTCCGAG AAAACCGCTG GACCAAACGG AAGCGTGAGA GAATTTGACC  TTATCGACAG GATCAAGGCT CAGCTAGAGG CTGCATGCCC CTCCACAGTC TCATGTGCCG ACATCGTCAC ATTAGCCACA CGTGACTCCG TGGCCTTAGC CGGAGGCCCG AGCTACAGCA  TCCCCACGGG AAGGCGCGAC GGTAGGGTCT CAAACAATGT GGACGTGGCA TTACCGGGTC CAACAATCTC GGTCTCCGGA GCCGTGAGTT TCTTCACCGT CAAAGGGATG AACACATTCG  ATGCTGTGGC TCTTTTGGGT GCACACACCG TTGGTCGGGG AAACTGTGGT CTCTTCAGCG ACCGAATCAC TAATTTCCAA GGAAGCGGAC GACCCGATCC ATCCATGGAC CCTGCTTTAG  TTACAAGGTA ATTTGAGGAT GATAAAACAA AAAATATATA GTTTCACATT CAATAAGAAA TATTTTATTT AACTCATAAA AATTATATTC TGATGTTTTC TTGTTTTTAA ATATAGCCTA  AGGAACACAT GCAGAAACAG TGCGTCAGCA GCCCTAGACC AGTCGACTCC ATTGAGATTC GACAACCAAT TCTTCAAGCA AATCCGTAAA AGAAGAGGAG TGTTGCAAGT TGACCAACGG  CTCGCAAGTG ACCGACAGAC TCGTGGCATC GTGGCCAGGT ACGCTAACAA CAACGCCTTC TTCAAGCGTC AGTTCGTTAG AGCGATGGTG AAGATGGGAG CCGTTGATGT GCTTACCGGT 
CGTAACGGTG AGATCAGGAG GAACTGCAGG AGATTCAACT GA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAAGT TTTCTTCTCT TCTTGTGCTT TTCTTTATTT TCCCGATAGC ATTTGCTCAA CTTAGAGTCG GGTTCTATAG CCAGTCATGC CCACAAGCCG AGACTATCGT ACGCAACCTG  GTGCGCCAAC GGTTTGGTGT TGACCCAACC GTCACCGCCG CTTTGCTCCG TATGCATTTC CACGACTGTT TCGTTAGGGG TTGTGACGCA TCTCTCCTCA TTGATGGAAC CAATTCCGAG  AAAACCGCTG GACCAAACGG AAGCGTGAGA GAATTTGACC TTATCGACAG GATCAAGGCT CAGCTAGAGG CTGCATGCCC CTCCACAGTC TCATGTGCCG ACATCGTCAC ATTAGCCACA  CGTGACTCCG TGGCCTTAGC CGGAGGCCCG AGCTACAGCA TCCCCACGGG AAGGCGCGAC GGTAGGGTCT CAAACAATGT GGACGTGGCA TTACCGGGTC CAACAATCTC GGTCTCCGGA  GCCGTGAGTT TCTTCACCGT CAAAGGGATG AACACATTCG ATGCTGTGGC TCTTTTGGGT GCACACACCG TTGGTCGGGG AAACTGTGGT CTCTTCAGCG ACCGAATCAC TAATTTCCAA  GGAAGCGGAC GACCCGATCC ATCCATGGAC CCTGCTTTAG TTACAAGCCT AAGGAACACA TGCAGAAACA GTGCGTCAGC AGCCCTAGAC CAGTCGACTC CATTGAGATT CGACAACCAA  TTCTTCAAGC AAATCCGTAA AAGAAGAGGA GTGTTGCAAG TTGACCAACG GCTCGCAAGT GACCGACAGA CTCGTGGCAT CGTGGCCAGG TACGCTAACA ACAACGCCTT CTTCAAGCGT 
CAGTTCGTTA GAGCGATGGT GAAGATGGGA GCCGTTGATG TGCTTACCGG TCGTAACGGT GAGATCAGGA GGAACTGCAG GAGATTCAAC TGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAAGT TTTCTTCTCT TCTTGTGCTT TTCTTTATTT TCCCGATAGC ATTTGCTCAA CTTAGAGTCG GGTTCTATAG CCAGTCATGC CCACAAGCCG AGACTATCGT ACGCAACCTG  GTGCGCCAAC GGTTTGGTGT TGACCCAACC GTCACCGCCG CTTTGCTCCG TATGCATTTC CACGACTGTT TCGTTAGGGG TTGTGACGCA TCTCTCCTCA TTGATGGAAC CAATTCCGAG  AAAACCGCTG GACCAAACGG AAGCGTGAGA GAATTTGACC TTATCGACAG GATCAAGGCT CAGCTAGAGG CTGCATGCCC CTCCACAGTC TCATGTGCCG ACATCGTCAC ATTAGCCACA  CGTGACTCCG TGGCCTTAGC CGGAGGCCCG AGCTACAGCA TCCCCACGGG AAGGCGCGAC GGTAGGGTCT CAAACAATGT GGACGTGGCA TTACCGGGTC CAACAATCTC GGTCTCCGGA  GCCGTGAGTT TCTTCACCGT CAAAGGGATG AACACATTCG ATGCTGTGGC TCTTTTGGGT GCACACACCG TTGGTCGGGG AAACTGTGGT CTCTTCAGCG ACCGAATCAC TAATTTCCAA  GGAAGCGGAC GACCCGATCC ATCCATGGAC CCTGCTTTAG TTACAAGCCT AAGGAACACA TGCAGAAACA GTGCGTCAGC AGCCCTAGAC CAGTCGACTC CATTGAGATT CGACAACCAA  TTCTTCAAGC AAATCCGTAA AAGAAGAGGA GTGTTGCAAG TTGACCAACG GCTCGCAAGT GACCGACAGA CTCGTGGCAT CGTGGCCAGG TACGCTAACA ACAACGCCTT CTTCAAGCGT 
CAGTTCGTTA GAGCGATGGT GAAGATGGGA GCCGTTGATG TGCTTACCGG TCGTAACGGT GAGATCAGGA GGAACTGCAG GAGATTCAAC TGA 

Retrieve as FASTA