Entry information : CagraPrx10 (Cagra.11786s0002)
Entry ID 14856
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-02 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-02 (Christophe Dunand)
Peroxidase information: CagraPrx10 (Cagra.11786s0002)
Name (synonym) CagraPrx10 (Cagra.11786s0002)
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx10
start..stop
S start..stop
CrubPrx47 568 0 1..276 70..345
BstrPrx18 520 0 1..276 70..345
AtPrx37 518 0 1..276 70..346
BstrPrx36 516 0 1..276 69..344
Literature and cross-references CagraPrx10 (Cagra.11786s0002)
Protein sequence: CagraPrx10 (Cagra.11786s0002)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   276
PWM (Da):   %s   30273.21  
PI (pH):   %s   7.06
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCDASILLDN TTSFRTEKDA FGNAKSARGF EVIDQMKAAV EKACPKTVSC ADLLAIAAQK SVVLAGGPSW TVPNGRRDSL KGFMDLANDN LPAPFFTLKQ LKDSFKKVGL ERPSDLVALS  GAHTFGKNQC QFIMDRLYNF NESGLPDPTL DKSYLTTLRK QCPQNGNQSV LVDFDLRTPT LFDNKYYVNL RENKGLIQSD QELFSSPDAS DTIPLVRAYA DGQGKFFDAF VEAMIRMGSL 
SPLTGKQGEI RLNCRVVNSK SKIMDVVDAN DFASSM* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to N in the sequence.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCGATATT GTTAGACAAC ACAACATCGT TTAGAACGGA GAAAGACGCC TTTGGGAACG CCAAATCCGC ACGAGGTTTC GAGGTGATCG ACCAAATGAA GGCTGCCGTG  GAGAAAGCAT GTCCTAAAAC AGTTTCATGT GCTGATTTAC TCGCAATCGC GGCTCAAAAA TCTGTCGTTT TGGTATGCAT TTTTTACAAT ACAATTCTTT TTTTCAATTC AAAATATGTT  TCTAGATCAT GTTTTTTGAT TCTTAAGTAG AAGAAAATAC TTAATACCAA ATATAATTGT TTTGTCCATA GGCGGGAGGT CCTTCATGGA CGGTTCCAAA TGGAAGAAGA GACAGTTTAA  AGGGGTTTAT GGATCTTGCT AACGATAACC TTCCAGCTCC ATTCTTTACT CTTAAACAAC TTAAGGATAG CTTCAAAAAA GTCGGACTCG AACGTCCTTC TGATCTCGTT GCTCTTTCCG  GTATGTTATC ATTTTAAACA TTTTCATCTA TAGTATTAAT CAGTCACAAC TATATGTATG ATTATTCGCA ATTAGTTTAT TTGTTCTCTA TACATTTTTC TTTTGATTAG GTGCTCACAC  CTTTGGTAAA AACCAATGTC AGTTCATAAT GGACCGTCTT TACAACTTCA ATGAATCCGG TTTACCCGAT CCAACCCTTG ATAAATCTTA CCTTACCACA CTTAGAAAAC AATGTCCACA  AAATGGAAAC CAAAGTGTCT TGGTAGATTT TGATTTACGT ACACCAACGC TATTCGACAA CAAATACTAT GTGAATCTAA GAGAAAACAA GGGTCTTATC CAAAGCGACC AAGAGCTATT  CTCTAGCCCT GATGCTTCAG ACACTATCCC TTTAGTCCGG GCTTACGCGG ATGGTCAAGG GAAATTTTTC GATGCGTTCG TGGAAGCAAT GATAAGGATG GGAAGCCTTT CACCTTTAAC  AGGGAAGCAA GGAGAGATTA GATTGAATTG TAGAGTTGTT AATTCGAAAT CCAAAATCAT GGATGTGGTA GATGCTAATG ACTTTGCAAG CTCAATGTGA TGAGCATATG AAGTTTCTTC 
TAATAATTAA TAAATTATCA ATGTTATGTT TTCTTCTACT TTCTTGTTTC TTTTGCGTTA CCTATGTATA ATCGATAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCGATATT GTTAGACAAC ACAACATCGT TTAGAACGGA GAAAGACGCC TTTGGGAACG CCAAATCCGC ACGAGGTTTC GAGGTGATCG ACCAAATGAA GGCTGCCGTG  GAGAAAGCAT GTCCTAAAAC AGTTTCATGT GCTGATTTAC TCGCAATCGC GGCTCAAAAA TCTGTCGTTT TGGCGGGAGG TCCTTCATGG ACGGTTCCAA ATGGAAGAAG AGACAGTTTA  AAGGGGTTTA TGGATCTTGC TAACGATAAC CTTCCAGCTC CATTCTTTAC TCTTAAACAA CTTAAGGATA GCTTCAAAAA AGTCGGACTC GAACGTCCTT CTGATCTCGT TGCTCTTTCC  GGTGCTCACA CCTTTGGTAA AAACCAATGT CAGTTCATAA TGGACCGTCT TTACAACTTC AATGAATCCG GTTTACCCGA TCCAACCCTT GATAAATCTT ACCTTACCAC ACTTAGAAAA  CAATGTCCAC AAAATGGAAA CCAAAGTGTC TTGGTAGATT TTGATTTACG TACACCAACG CTATTCGACA ACAAATACTA TGTGAATCTA AGAGAAAACA AGGGTCTTAT CCAAAGCGAC  CAAGAGCTAT TCTCTAGCCC TGATGCTTCA GACACTATCC CTTTAGTCCG GGCTTACGCG GATGGTCAAG GGAAATTTTT CGATGCGTTC GTGGAAGCAA TGATAAGGAT GGGAAGCCTT 
TCACCTTTAA CAGGGAAGCA AGGAGAGATT AGATTGAATT GTAGAGTTGT TAATTCGAAA TCCAAAATCA TGGATGTGGT AGATGCTAAT GACTTTGCAA GCTCAATGTG A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCGATATT GTTAGACAAC ACAACATCGT TTAGAACGGA GAAAGACGCC TTTGGGAACG CCAAATCCGC ACGAGGTTTC GAGGTGATCG ACCAAATGAA GGCTGCCGTG  GAGAAAGCAT GTCCTAAAAC AGTTTCATGT GCTGATTTAC TCGCAATCGC GGCTCAAAAA TCTGTCGTTT TGGCGGGAGG TCCTTCATGG ACGGTTCCAA ATGGAAGAAG AGACAGTTTA  AAGGGGTTTA TGGATCTTGC TAACGATAAC CTTCCAGCTC CATTCTTTAC TCTTAAACAA CTTAAGGATA GCTTCAAAAA AGTCGGACTC GAACGTCCTT CTGATCTCGT TGCTCTTTCC  GGTGCTCACA CCTTTGGTAA AAACCAATGT CAGTTCATAA TGGACCGTCT TTACAACTTC AATGAATCCG GTTTACCCGA TCCAACCCTT GATAAATCTT ACCTTACCAC ACTTAGAAAA  CAATGTCCAC AAAATGGAAA CCAAAGTGTC TTGGTAGATT TTGATTTACG TACACCAACG CTATTCGACA ACAAATACTA TGTGAATCTA AGAGAAAACA AGGGTCTTAT CCAAAGCGAC  CAAGAGCTAT TCTCTAGCCC TGATGCTTCA GACACTATCC CTTTAGTCCG GGCTTACGCG GATGGTCAAG GGAAATTTTT CGATGCGTTC GTGGAAGCAA TGATAAGGAT GGGAAGCCTT  TCACCTTTAA CAGGGAAGCA AGGAGAGATT AGATTGAATT GTAGAGTTGT TAATTCGAAA TCCAAAATCA TGGATGTGGT AGATGCTAAT GACTTTGCAA GCTCAATGTG ATGAGCATAT 
GAAGTTTCTT CTAATAATTA ATAAATTATC AATGTTATGT TTTCTTCTAC TTTCTTGTTT CTTTTGCGTT ACCTATGTAT AATCGATAAG 

Retrieve as FASTA