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Entry information : CagraAPx04 (Cagra.2236s0014)
Entry ID 14861
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-03-01 (Christophe Dunand)
Peroxidase information: CagraAPx04 (Cagra.2236s0014)
Name (synonym) CagraAPx04 (Cagra.2236s0014)
Class Ascorbate peroxidase    [Orthogroup: APx2006]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraAPx04
start..stop		 S start..stop
CrubAPx04 577 0 44..323 1..280
AhalAPx03 553 0 44..323 1..280
AtAPx04 550 0 44..322 1..279
AlyAPx04 543 0 44..322 1..279
Literature and cross-references CagraAPx04 (Cagra.2236s0014)
Protein sequence: CagraAPx04 (Cagra.2236s0014)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (557)
PWM (Da):   %s   35972.54 (61017.1) Transmb domain:   %s   o293-315i
PI (pH):   %s   8.73 (4.51) Peptide Signal:   %s   cut: 20 range:20-576
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKHTSPLDS SSSYLYIHSS ESFFNLIHRF FELFLLALFK SLTMAVNVDA DYLKEIEKAR RDLRALISSR NCAPIMLRLA WHDAGTYDAK KKTGGANGSI RFKEELNRPH NKGLEKAVAF  CEEVKAKHPR VTYADLYQLA GVVAVEVTGG PAIPFTPGRK DADSPDEGEL PNPNEDASHL RNLFSRMGLS DRDIVALSGG HTLGRAHKER SDFEGPWTQE PLKFDNSYFV ELQKGETPGL 
LQLKTDRALV NDPKFHAFVK LYAKDEDMFF KAYAISHKKL SELGFNPPRR ISSAVTQQTL GIAVAAAVVI FTICYEASRR GK* 

Retrieve as FASTA  
Remarks
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAAAC ATACTTCTCC CCTAGACTCT TCTTCATCTT ATTTATATAT CCATTCCTCT GAGTCATTCT TCAATCTTAT TCATCGATTT TTTGAGTTAT TTCTGCTTGC TCTTTTCAAA  AGTCTGACAA TGGCAGTGAA CGTTGATGCA GATTACCTCA AAGAAATAGA AAAGGCTCGT AGAGACCTTC GAGCTCTCAT CTCTTCCAGA AATTGTGCTC CCATTATGCT CCGTCTTGCG  TAAGCTCTTT CTTTCTGTAC CATTCCCCGT TTCTCATTTT TTGTCTGGAT GTTTCTAACT GCATATTCTT GTATCCATAT ATAGATGGCA TGATGCAGGA ACCTATGATG CCAAAAAGAA  AACCGGAGGT GCCAATGGAT CAATCAGGTT CAAGGAAGAG CTAAACCGTC CACACAACAA AGGTTTGGAG AAAGCAGTCG CCTTCTGCGG TGAGTTTATG CTAAAACCTT TAATCCATCA  CTACTCCACT CTTAAGGACC TGACAATAAA ACGGTAGCTG ATTCCTTTGA TTTTTGTTGA TTTCAGAGGA AGTCAAGGCT AAGCATCCAC GAGTCACTTA CGCAGACCTT TATCAGGTAA  ACATTGCCAT ATAGCATCTC TAAGCCATTA AACCCATAAA AACTTCCTGC CCCCTTGATG GTTAGCTTGA CAGATTATTT GATTTCATTT CAGCTCGCTG GAGTTGTTGC AGTGGAGGTT  ACTGGTGGCC CTGCAATCCC ATTTACTCCA GGCCGTAAGG TAGTTACACT TACTGCTAAA GGGTATGCGC TAAATCATAA TTGCCAAGTG AGTTTACTGA ATTTGAGACA TATGATATCA  GGATGCTGAT TCCCCAGACG AAGGGGAGCT TCCAAATCCA AATGAAGGTT ACCCTCGCAG CTTGTAGGTC TTGCAACGGG ATTCTATTTT ACAAACTGAC TAAACTGATT TTTGGATTAT  TGCAGATGCC TCACATTTAA GAAATCTCTT CTCTCGTATG GGGCTATCGG ATAGAGACAT CGTAGCTCTC TCTGGAGGCC ACACTTTGGT ACTAATTGCT AACTCTCCTT CAATATATCC  GCTACTAAAA ATACTCCAAT GAACCAACTT GGTTGCTACT TTTGTATATA GGGCCGTGCA CATAAGGAGA GATCCGATTT TGAAGGTCCT TGGACACAAG AACCTCTCAA GTTTGATAAT  TCATATTTCG TGTAAGCCAA TAACAAAATC ACACAGAGTT AAAGTAAGAG AGAGTAAAAG TTCTGAAACT TACGCTTGTC TGCTGATTGG TTTTTCAGAG AACTTCAAAA AGGGGAGACT  CCAGGATTGC TACAACTGAA AACGGACAGG GCTCTAGTTA ATGATCCCAA GTTCCACGCT TTTGTTAAGC TGTATGCAAA GGTAATTAGA TTTTACTACG ATTATAAGAA ACTTTTAGTT  TGGATGATTC GCTGGTGTTA TCAACATTAA AAAAAGTATT ATGATGTGTA GGACGAGGAT ATGTTCTTCA AAGCATATGC AATTTCTCAC AAGAAACTCT CAGAACTAGG ATTTAATCCG 
CCAAGAAGAA TTTCTTCAGC AGTGACACAG CAGACGCTTG GAATCGCTGT TGCTGCAGCT GTGGTGATCT TTACCATATG CTACGAAGCA AGCAGAAGAG GCAAGTGA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAAAC ATACTTCTCC CCTAGACTCT TCTTCATCTT ATTTATATAT CCATTCCTCT GAGTCATTCT TCAATCTTAT TCATCGATTT TTTGAGTTAT TTCTGCTTGC TCTTTTCAAA  AGTCTGACAA TGGCAGTGAA CGTTGATGCA GATTACCTCA AAGAAATAGA AAAGGCTCGT AGAGACCTTC GAGCTCTCAT CTCTTCCAGA AATTGTGCTC CCATTATGCT CCGTCTTGCA  TGGCATGATG CAGGAACCTA TGATGCCAAA AAGAAAACCG GAGGTGCCAA TGGATCAATC AGGTTCAAGG AAGAGCTAAA CCGTCCACAC AACAAAGGTT TGGAGAAAGC AGTCGCCTTC  TGCGAGGAAG TCAAGGCTAA GCATCCACGA GTCACTTACG CAGACCTTTA TCAGCTCGCT GGAGTTGTTG CAGTGGAGGT TACTGGTGGC CCTGCAATCC CATTTACTCC AGGCCGTAAG  GATGCTGATT CCCCAGACGA AGGGGAGCTT CCAAATCCAA ATGAAGATGC CTCACATTTA AGAAATCTCT TCTCTCGTAT GGGGCTATCG GATAGAGACA TCGTAGCTCT CTCTGGAGGC  CACACTTTGG GCCGTGCACA TAAGGAGAGA TCCGATTTTG AAGGTCCTTG GACACAAGAA CCTCTCAAGT TTGATAATTC ATATTTCGTA GAACTTCAAA AAGGGGAGAC TCCAGGATTG  CTACAACTGA AAACGGACAG GGCTCTAGTT AATGATCCCA AGTTCCACGC TTTTGTTAAG CTGTATGCAA AGGACGAGGA TATGTTCTTC AAAGCATATG CAATTTCTCA CAAGAAACTC  TCAGAACTAG GATTTAATCC GCCAAGAAGA ATTTCTTCAG CAGTGACACA GCAGACGCTT GGAATCGCTG TTGCTGCAGC TGTGGTGATC TTTACCATAT GCTACGAAGC AAGCAGAAGA 
GGCAAGTGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCAAAAGGGT TCTCCCAAAA CTATTAACTT TAATACTTTG CTTTCTCCAG ATGACAAAAC ATACTTCTCC CCTAGACTCT TCTTCATCTT ATTTATATAT CCATTCCTCT GAGTCATTCT  TCAATCTTAT TCATCGATTT TTTGAGTTAT TTCTGCTTGC TCTTTTCAAA AGTCTGACAA TGGCAGTGAA CGTTGATGCA GATTACCTCA AAGAAATAGA AAAGGCTCGT AGAGACCTTC  GAGCTCTCAT CTCTTCCAGA AATTGTGCTC CCATTATGCT CCGTCTTGCA TGGCATGATG CAGGAACCTA TGATGCCAAA AAGAAAACCG GAGGTGCCAA TGGATCAATC AGGTTCAAGG  AAGAGCTAAA CCGTCCACAC AACAAAGGTT TGGAGAAAGC AGTCGCCTTC TGCGAGGAAG TCAAGGCTAA GCATCCACGA GTCACTTACG CAGACCTTTA TCAGCTCGCT GGAGTTGTTG  CAGTGGAGGT TACTGGTGGC CCTGCAATCC CATTTACTCC AGGCCGTAAG GATGCTGATT CCCCAGACGA AGGGGAGCTT CCAAATCCAA ATGAAGATGC CTCACATTTA AGAAATCTCT  TCTCTCGTAT GGGGCTATCG GATAGAGACA TCGTAGCTCT CTCTGGAGGC CACACTTTGG GCCGTGCACA TAAGGAGAGA TCCGATTTTG AAGGTCCTTG GACACAAGAA CCTCTCAAGT  TTGATAATTC ATATTTCGTA GAACTTCAAA AAGGGGAGAC TCCAGGATTG CTACAACTGA AAACGGACAG GGCTCTAGTT AATGATCCCA AGTTCCACGC TTTTGTTAAG CTGTATGCAA  AGGACGAGGA TATGTTCTTC AAAGCATATG CAATTTCTCA CAAGAAACTC TCAGAACTAG GATTTAATCC GCCAAGAAGA ATTTCTTCAG CAGTGACACA GCAGACGCTT GGAATCGCTG 
TTGCTGCAGC TGTGGTGATC TTTACCATAT GCTACGAAGC AAGCAGAAGA GGCAAGTGA 

Retrieve as FASTA