Entry information : CagraPrx23Cagra.8005s0009
Entry ID 14869
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CagraPrx23Cagra.8005s0009
Name CagraPrx23Cagra.8005s0009
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx23
start..stop
S start..stop
AlyPrx54 657 0 1..361 1..357
AtPrx54 651 0 1..361 1..358
BstrPrx43 649 0 1..351 1..351
AruPrx54 642 0 1..361 1..358
Literature and cross-references CagraPrx23Cagra.8005s0009
Protein sequence: CagraPrx23Cagra.8005s0009
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   361 (330)
PWM (Da):   %s   37699.51 (34364.8) Transmb domain:   %s   i13-35o
PI (pH):   %s   4.31 (4.34) Peptide Signal:   %s   cut: 32 range:32-361
Sequence
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Send to Peroxiscan
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MAVTRSSSTC DGFFIISLLV IVSLLFGTSS AQLNATFYSA TCPNASAIVR STIQQALQSD ARIGASLIRL HFHDCFVNGC DGSLLLDDTG SIQSEKNAAP NANSTRGFNV VDNIKTALEN  ACPGIVSCSD VLALASEASV SLAGGPSWSV LLGRRDGLNA NLSGANSSLP SPFEGLNNIT SKFVAVGLNT TDVVALSGAH TFGRGQCVTF NNRLFNFNGT ENPDPTLNTT LLSTLQQLCP  QNGSGSGITN LDLTTPDAFD SSYFTNLQSN NGLLQSDQEL FSNTGSTTVA IVNSFASNQT LFFEAFIQSM IKMGNISPLT GANGEIRQDC KVVNAQSSAT EAEHIQLQSD GGSLSVAVAD 
M* 

Retrieve as FASTA  
Remarks
DNA
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ATGGCTGTAA CAAGATCTTC CTCTACTTGT GATGGTTTCT TCATCATCAG CCTTCTTGTT ATCGTTTCTT TATTGTTTGG GACTTCATCT GCGCAGTTAA ACGCAACGTT TTACTCGGCT  ACGTGCCCTA ACGCCTCTGC CATCGTTCGC AGCACTATTC AGCAAGCTCT TCAATCCGAC GCGAGAATCG GAGCAAGCCT AATCCGCCTT CATTTTCACG ACTGCTTTGT TAATGTATAT  CAGCTTCTTG ATTTCTAATT ATTTTGTCAA AAAGCCTTAT AAGTTTTGTT ATTCTAAACC ATTGCATTGC TTCTTTACTT TTGAAAAGGG TTGCGACGGG TCGCTCTTGC TTGACGATAC  TGGAAGCATC CAGAGCGAGA AGAACGCTGC TCCCAACGCA AACTCAACTA GAGGATTCAA TGTTGTCGAT AATATCAAGA CTGCCCTCGA GAATGCTTGT CCCGGCATTG TCTCTTGCTC  TGACGTTTTA GCCCTTGCCT CTGAGGCTTC TGTTTCTTTG GTACGTAATA ATACTTTCTT CATTAACATA TCAAACAATA CATAATTTCT ATAAATTGTC TACTTCTGAC AAGCCGGGCT  GGACCACATA TTAAAAAGCC CGTTTAACTT TCCTAATATA TATTTCATTT ATGTTCACGT TCATCTATAA AAAAAAATTA TATACTACAT GTTTGATCAT CTTCAGGCAG GAGGGCCTTC  ATGGAGTGTG TTATTAGGAA GAAGAGATGG TCTCAATGCA AACCTGTCTG GGGCCAATTC GTCACTTCCC TCTCCCTTTG AAGGCCTTAA CAACATAACA TCTAAATTTG TAGCTGTCGG  CCTAAATACA ACCGATGTAG TAGCCTTGTC AGGTAATTTA TCTGACACGT AGGTTTAATT ATACTTGCTG CTCAATTCAA ACAAATCAAT GTGCGTATAT AGGGGCGCAT ACGTTTGGGC  GTGGTCAATG CGTAACGTTC AACAATAGGC TATTCAACTT CAACGGGACA GAGAACCCCG ATCCGACTTT GAACACAACA CTTCTCAGCA CTCTTCAACA GCTATGTCCT CAAAACGGCA  GCGGATCAGG GATCACCAAT CTCGATCTGA CCACACCTGA TGCATTCGAT AGTAGTTACT TCACGAACCT TCAGAGTAAC AATGGGCTTC TTCAGTCAGA CCAGGAACTG TTCTCCAATA  CTGGCTCAAC CACCGTAGCA ATTGTTAATT CCTTTGCAAG TAACCAGACT CTGTTTTTTG AGGCGTTTAT TCAGTCTATG ATCAAGATGG GGAACATTAG TCCATTGACA GGGGCTAATG 
GAGAGATTAG ACAAGATTGT AAAGTGGTTA ATGCACAGTC ATCAGCCACT GAAGCAGAGC ACATTCAGTT ACAATCTGAT GGAGGATCGC TGAGTGTAGC AGTCGCAGAT ATGTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGTAA CAAGATCTTC CTCTACTTGT GATGGTTTCT TCATCATCAG CCTTCTTGTT ATCGTTTCTT TATTGTTTGG GACTTCATCT GCGCAGTTAA ACGCAACGTT TTACTCGGCT  ACGTGCCCTA ACGCCTCTGC CATCGTTCGC AGCACTATTC AGCAAGCTCT TCAATCCGAC GCGAGAATCG GAGCAAGCCT AATCCGCCTT CATTTTCACG ACTGCTTTGT TAATGGTTGC  GACGGGTCGC TCTTGCTTGA CGATACTGGA AGCATCCAGA GCGAGAAGAA CGCTGCTCCC AACGCAAACT CAACTAGAGG ATTCAATGTT GTCGATAATA TCAAGACTGC CCTCGAGAAT  GCTTGTCCCG GCATTGTCTC TTGCTCTGAC GTTTTAGCCC TTGCCTCTGA GGCTTCTGTT TCTTTGGCAG GAGGGCCTTC ATGGAGTGTG TTATTAGGAA GAAGAGATGG TCTCAATGCA  AACCTGTCTG GGGCCAATTC GTCACTTCCC TCTCCCTTTG AAGGCCTTAA CAACATAACA TCTAAATTTG TAGCTGTCGG CCTAAATACA ACCGATGTAG TAGCCTTGTC AGGGGCGCAT  ACGTTTGGGC GTGGTCAATG CGTAACGTTC AACAATAGGC TATTCAACTT CAACGGGACA GAGAACCCCG ATCCGACTTT GAACACAACA CTTCTCAGCA CTCTTCAACA GCTATGTCCT  CAAAACGGCA GCGGATCAGG GATCACCAAT CTCGATCTGA CCACACCTGA TGCATTCGAT AGTAGTTACT TCACGAACCT TCAGAGTAAC AATGGGCTTC TTCAGTCAGA CCAGGAACTG  TTCTCCAATA CTGGCTCAAC CACCGTAGCA ATTGTTAATT CCTTTGCAAG TAACCAGACT CTGTTTTTTG AGGCGTTTAT TCAGTCTATG ATCAAGATGG GGAACATTAG TCCATTGACA  GGGGCTAATG GAGAGATTAG ACAAGATTGT AAAGTGGTTA ATGCACAGTC ATCAGCCACT GAAGCAGAGC ACATTCAGTT ACAATCTGAT GGAGGATCGC TGAGTGTAGC AGTCGCAGAT 
ATGTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGTAA CAAGATCTTC CTCTACTTGT GATGGTTTCT TCATCATCAG CCTTCTTGTT ATCGTTTCTT TATTGTTTGG GACTTCATCT GCGCAGTTAA ACGCAACGTT TTACTCGGCT  ACGTGCCCTA ACGCCTCTGC CATCGTTCGC AGCACTATTC AGCAAGCTCT TCAATCCGAC GCGAGAATCG GAGCAAGCCT AATCCGCCTT CATTTTCACG ACTGCTTTGT TAATGGTTGC  GACGGGTCGC TCTTGCTTGA CGATACTGGA AGCATCCAGA GCGAGAAGAA CGCTGCTCCC AACGCAAACT CAACTAGAGG ATTCAATGTT GTCGATAATA TCAAGACTGC CCTCGAGAAT  GCTTGTCCCG GCATTGTCTC TTGCTCTGAC GTTTTAGCCC TTGCCTCTGA GGCTTCTGTT TCTTTGGCAG GAGGGCCTTC ATGGAGTGTG TTATTAGGAA GAAGAGATGG TCTCAATGCA  AACCTGTCTG GGGCCAATTC GTCACTTCCC TCTCCCTTTG AAGGCCTTAA CAACATAACA TCTAAATTTG TAGCTGTCGG CCTAAATACA ACCGATGTAG TAGCCTTGTC AGGGGCGCAT  ACGTTTGGGC GTGGTCAATG CGTAACGTTC AACAATAGGC TATTCAACTT CAACGGGACA GAGAACCCCG ATCCGACTTT GAACACAACA CTTCTCAGCA CTCTTCAACA GCTATGTCCT  CAAAACGGCA GCGGATCAGG GATCACCAAT CTCGATCTGA CCACACCTGA TGCATTCGAT AGTAGTTACT TCACGAACCT TCAGAGTAAC AATGGGCTTC TTCAGTCAGA CCAGGAACTG  TTCTCCAATA CTGGCTCAAC CACCGTAGCA ATTGTTAATT CCTTTGCAAG TAACCAGACT CTGTTTTTTG AGGCGTTTAT TCAGTCTATG ATCAAGATGG GGAACATTAG TCCATTGACA  GGGGCTAATG GAGAGATTAG ACAAGATTGT AAAGTGGTTA ATGCACAGTC ATCAGCCACT GAAGCAGAGC ACATTCAGTT ACAATCTGAT GGAGGATCGC TGAGTGTAGC AGTCGCAGAT 
ATGTGA 

Retrieve as FASTA