Entry information : CagraPrx27 (Cagra.15405s0001)
Entry ID 14873
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-02 (Christophe Dunand)
Peroxidase information: CagraPrx27 (Cagra.15405s0001)
Name (synonym) CagraPrx27 (Cagra.15405s0001)
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx27
start..stop
S start..stop
AtPrx22 299 1e-103 1..155 195..349
CagraPrx11 295 2e-102 4..155 160..312
AhalPrx38 295 3e-102 1..155 195..349
CrubPrx39 295 8e-102 1..155 195..350
Literature and cross-references CagraPrx27 (Cagra.15405s0001)
Protein sequence: CagraPrx27 (Cagra.15405s0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   155
PWM (Da):   %s   17201.48  
PI (pH):   %s   7.18
Sequence
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Send to Peroxiscan
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MVGGHTFGKA QCQFVTPRLY NFNGTNRPDP SLNPTYLSEL RQLCPQNGNG TVLVNFDPVT PTAFDSQYYT NLRNGKGLIQ SDQELFSTPG ADTIPLVNQY SSDMSVFFRA FVDAMIRMGN 
LRPLTGNQGE IRQNCRVVNS RIRVVENDDG VVSSI* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to scaffold border. Repetition of the sequence!!!
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAGGTG GTCACACATT TGGAAAAGCA CAGTGCCAAT TCGTGACACC TCGTCTTTAC AACTTCAACG GAACCAACAG ACCAGACCCA AGTCTTAACC CAACTTACCT CTCCGAGCTT  CGTCAACTGT GTCCTCAAAA CGGAAACGGC ACAGTTCTGG TCAACTTCGA TCCCGTGACT CCAACCGCTT TCGATAGTCA ATACTACACC AATCTTCGCA ATGGGAAAGG TCTGATTCAG  AGTGACCAAG AACTCTTCTC GACCCCAGGA GCCGATACGA TCCCACTAGT AAACCAATAC AGCAGCGACA TGTCCGTGTT CTTTCGAGCA TTCGTTGACG CAATGATAAG GATGGGTAAT 
CTTAGACCAT TGACTGGAAA TCAAGGCGAG ATAAGACAGA ACTGTAGGGT TGTTAATTCG CGAATCAGGG TTGTGGAGAA TGACGATGGT GTTGTGAGTT CTATTTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAGGTG GTCACACATT TGGAAAAGCA CAGTGCCAAT TCGTGACACC TCGTCTTTAC AACTTCAACG GAACCAACAG ACCAGACCCA AGTCTTAACC CAACTTACCT CTCCGAGCTT  CGTCAACTGT GTCCTCAAAA CGGAAACGGC ACAGTTCTGG TCAACTTCGA TCCCGTGACT CCAACCGCTT TCGATAGTCA ATACTACACC AATCTTCGCA ATGGGAAAGG TCTGATTCAG  AGTGACCAAG AACTCTTCTC GACCCCAGGA GCCGATACGA TCCCACTAGT AAACCAATAC AGCAGCGACA TGTCCGTGTT CTTTCGAGCA TTCGTTGACG CAATGATAAG GATGGGTAAT 
CTTAGACCAT TGACTGGAAA TCAAGGCGAG ATAAGACAGA ACTGTAGGGT TGTTAATTCG CGAATCAGGG TTGTGGAGAA TGACGATGGT GTTGTGAGTT CTATTTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAGGTG GTCACACATT TGGAAAAGCA CAGTGCCAAT TCGTGACACC TCGTCTTTAC AACTTCAACG GAACCAACAG ACCAGACCCA AGTCTTAACC CAACTTACCT CTCCGAGCTT  CGTCAACTGT GTCCTCAAAA CGGAAACGGC ACAGTTCTGG TCAACTTCGA TCCCGTGACT CCAACCGCTT TCGATAGTCA ATACTACACC AATCTTCGCA ATGGGAAAGG TCTGATTCAG  AGTGACCAAG AACTCTTCTC GACCCCAGGA GCCGATACGA TCCCACTAGT AAACCAATAC AGCAGCGACA TGTCCGTGTT CTTTCGAGCA TTCGTTGACG CAATGATAAG GATGGGTAAT 
CTTAGACCAT TGACTGGAAA TCAAGGCGAG ATAAGACAGA ACTGTAGGGT TGTTAATTCG CGAATCAGGG TTGTGGAGAA TGACGATGGT GTTGTGAGTT CTATTTGA 

Retrieve as FASTA