Entry information : CagraPrx55 (Cagra.1036s0038)
Entry ID 14901
Creation 2018-03-01 (Christophe Dunand)
Last sequence changes 2018-03-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-02 (Christophe Dunand)
Peroxidase information: CagraPrx55 (Cagra.1036s0038)
Name (synonym) CagraPrx55 (Cagra.1036s0038)
Class Class III peroxidase     [Orthogroup: Prx048]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella grandiflora    [TaxId: 264402 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CagraPrx55
start..stop
S start..stop
CrubPrx109 546 0 1..274 56..324
CrubPrx46 516 0 1..274 56..330
BstrPrx35 515 0 1..274 56..329
AlyPrx56-1 508 0 1..274 56..329
Literature and cross-references CagraPrx55 (Cagra.1036s0038)
Protein sequence: CagraPrx55 (Cagra.1036s0038)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   274
PWM (Da):   %s   30286.57  
PI (pH):   %s   9.94
Sequence
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Send to Peroxiscan
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MKKDPTLGAP LLRLFFHDCF VRGCEGSVLL ELKNKKDEKN AMPNLSLRGF EIIDNAKAAL EKVCPGIVSC SDVLAIVARD AMVALNGPSW EVETGRRDGL VTNMYEALSN LPSPLSNISS  LITRFHSKGL DKKDLVVLSG GHTLGKGHCP QIRNRLYNFT GKGDSDPNLD TKYAAKLRNK CKPTDNTMAL EMDPGSFKTF DVSYFKRVSQ RRGLFQSDAA LLDNQETKSY LLKQMNSDGS 
TFFKDFGVSM VKMGRIGVLT GKVGQVRKKC RMVN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to N in the sequence.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGAAGG ACCCGACACT TGGAGCTCCT TTGCTAAGAT TGTTCTTCCA TGATTGCTTC GTTCGGGTAA TGTCCTCAAT ATCCATTTCT TTTTTTTTTG GGGAACTTTA TCGATCTAAT  GACTGAATCA TGCATGGTAA TTTAGGGATG CGAAGGGTCA GTCTTGCTAG AGTTAAAGAA CAAAAAAGAT GAGAAAAACG CAATGCCCAA CCTCAGCCTT CGAGGGTTTG AGATCATAGA  CAATGCAAAG GCAGCTCTAG AAAAGGTGTG TCCGGGCATT GTTTCTTGCT CTGATGTGTT GGCTATTGTC GCTAGGGATG CAATGGTTGC GGTAAGTATA TAGTTATACT ATCAGCTTAT  AGTGGATCTA ATATTTGGTC GAGCTCACGG TATCTTTATT ACACCCTTCC TTTTTTTTTT TGCGCTTAGT AAAAATTTCA CATGGTGATT ATAGACTCCA TAAATTATGT TGGACGCATA  GAATCCATAA ATCTGTTGTA TATGTAATTT GTTAGATTTT AGAGATTATA TACTTTTATG ATATACCAAT CAATATATAT TCAGCTCAAT GGACCGTCGT GGGAGGTTGA AACAGGAAGA  AGAGACGGTC TGGTTACAAA CATGTATGAG GCCCTATCAA ACCTACCATC ACCACTTAGT AATATCAGTA GCCTTATCAC TCGATTCCAT TCCAAAGGCC TAGACAAGAA AGACCTCGTT  GTGCTTTCAG GTTTGTTATA GAATTAGAAA TTACATTCAC AAATCATACC TGAACCATGC ATCAAAATAA ATAAAAAAGT ACAGTGTTTC TTGGAACAAA CAAGAAACCA GATAAAAACT  CATTAACAAA GAACAATATT TATAAATTGG TTTTGTCCGA CATTTGATAG AATTGACTTG AAAAAATTAG AAAGGCTGTC TCCAATCAAA TTTTTTGAGA TTGAAAAAGA CCATACTTTG  TATCATATTC ACTTTCTTGA TATTTCACTA GCTTTTATAT GAGAAGAATT TATTATTTTA TTCTCATTTT TCTCCTTTTT CCAAGCATTT TTTTTTTTTT TGCTATTTTA GACTTTTAAA  ATAGCAACTA GCAAGAATAC TCTGGTCTAC TACATAATTT GTAGATTAAT CTTAGTTTTG GCTTGGGATA TCCAGTTATA AAATAAATAA AAGTATAACC ATTCTCAAAT CAACTTATTT  GTATATACTT ACATTATAAT AGGTGGACAC ACACTAGGGA AAGGACATTG TCCTCAAATC AGAAACCGGC TCTACAACTT CACCGGGAAA GGAGATAGTG ACCCAAACTT AGACACGAAA  TACGCAGCCA AACTCAGAAA TAAATGCAAG CCAACTGACA ACACAATGGC ATTAGAGATG GATCCAGGAA GCTTTAAAAC GTTCGATGTG AGCTACTTTA AGCGTGTGTC TCAAAGAAGA  GGGTTGTTTC AATCAGATGC AGCTCTTTTA GACAATCAAG AGACCAAGTC TTATCTTCTC AAGCAAATGA ATAGTGATGG CTCTACTTTC TTTAAAGACT TTGGTGTCTC TATGGTAAAG 
ATGGGTCGGA TTGGGGTTTT AACGGGAAAG GTTGGGCAAG TTCGCAAGAA ATGCAGAATG GTTAATTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGAAGG ACCCGACACT TGGAGCTCCT TTGCTAAGAT TGTTCTTCCA TGATTGCTTC GTTCGGGGAT GCGAAGGGTC AGTCTTGCTA GAGTTAAAGA ACAAAAAAGA TGAGAAAAAC  GCAATGCCCA ACCTCAGCCT TCGAGGGTTT GAGATCATAG ACAATGCAAA GGCAGCTCTA GAAAAGGTGT GTCCGGGCAT TGTTTCTTGC TCTGATGTGT TGGCTATTGT CGCTAGGGAT  GCAATGGTTG CGCTCAATGG ACCGTCGTGG GAGGTTGAAA CAGGAAGAAG AGACGGTCTG GTTACAAACA TGTATGAGGC CCTATCAAAC CTACCATCAC CACTTAGTAA TATCAGTAGC  CTTATCACTC GATTCCATTC CAAAGGCCTA GACAAGAAAG ACCTCGTTGT GCTTTCAGGT GGACACACAC TAGGGAAAGG ACATTGTCCT CAAATCAGAA ACCGGCTCTA CAACTTCACC  GGGAAAGGAG ATAGTGACCC AAACTTAGAC ACGAAATACG CAGCCAAACT CAGAAATAAA TGCAAGCCAA CTGACAACAC AATGGCATTA GAGATGGATC CAGGAAGCTT TAAAACGTTC  GATGTGAGCT ACTTTAAGCG TGTGTCTCAA AGAAGAGGGT TGTTTCAATC AGATGCAGCT CTTTTAGACA ATCAAGAGAC CAAGTCTTAT CTTCTCAAGC AAATGAATAG TGATGGCTCT 
ACTTTCTTTA AAGACTTTGG TGTCTCTATG GTAAAGATGG GTCGGATTGG GGTTTTAACG GGAAAGGTTG GGCAAGTTCG CAAGAAATGC AGAATGGTTA ATTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGAAGG ACCCGACACT TGGAGCTCCT TTGCTAAGAT TGTTCTTCCA TGATTGCTTC GTTCGGGGAT GCGAAGGGTC AGTCTTGCTA GAGTTAAAGA ACAAAAAAGA TGAGAAAAAC  GCAATGCCCA ACCTCAGCCT TCGAGGGTTT GAGATCATAG ACAATGCAAA GGCAGCTCTA GAAAAGGTGT GTCCGGGCAT TGTTTCTTGC TCTGATGTGT TGGCTATTGT CGCTAGGGAT  GCAATGGTTG CGCTCAATGG ACCGTCGTGG GAGGTTGAAA CAGGAAGAAG AGACGGTCTG GTTACAAACA TGTATGAGGC CCTATCAAAC CTACCATCAC CACTTAGTAA TATCAGTAGC  CTTATCACTC GATTCCATTC CAAAGGCCTA GACAAGAAAG ACCTCGTTGT GCTTTCAGGT GGACACACAC TAGGGAAAGG ACATTGTCCT CAAATCAGAA ACCGGCTCTA CAACTTCACC  GGGAAAGGAG ATAGTGACCC AAACTTAGAC ACGAAATACG CAGCCAAACT CAGAAATAAA TGCAAGCCAA CTGACAACAC AATGGCATTA GAGATGGATC CAGGAAGCTT TAAAACGTTC  GATGTGAGCT ACTTTAAGCG TGTGTCTCAA AGAAGAGGGT TGTTTCAATC AGATGCAGCT CTTTTAGACA ATCAAGAGAC CAAGTCTTAT CTTCTCAAGC AAATGAATAG TGATGGCTCT 
ACTTTCTTTA AAGACTTTGG TGTCTCTATG GTAAAGATGG GTCGGATTGG GGTTTTAACG GGAAAGGTTG GGCAAGTTCG CAAGAAATGC AGAATGGTTA ATTAA 

Retrieve as FASTA