Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
256 |
PWM (Da): |
27771.03 |
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PI (pH):
| 6.51 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCDASILLDD SATIQSEKNA GPNKNSIRGF QVIDEIKAKL EQACPQVVSC ADILALAARG STVLSGGPSW ELPLGRRDSR TASLNGANTN IPAPNSTIQN LLTMFQRKGL NEEDLVSLSG
GHTIGVARCT TFKQRLYNQN GNNQPDETLE RSYYYGLRSI CPPTGGDNNI SPLDLASPAR FDNTYFKLLL WGKGLLTSDE VLITGNVDKT VALVKAYAED ESLFFRQFAK SMVNMGNIQP
LTGFNGEIRK SCHVIN*
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. 5'end is missing due to scaffold border. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGATG CATCAATCTT GTTGGATGAT AGTGCTACCA TACAAAGTGA AAAGAACGCA GGACCAAACA AGAACTCCAT TAGAGGGTTT CAAGTCATAG ATGAGATCAA AGCCAAACTG
GAACAAGCTT GTCCTCAAGT TGTCTCATGT GCAGACATTC TTGCTCTTGC TGCTCGTGGT TCAACTGTTC TGGTAAAATA GAGACACCTT CAAGAGATTT GGCTCATGAC TTACAAGTTA
TATAATCTAA TATTGCTAAA GTTGTGGTTC AATACAGAGC GGTGGACCAT CATGGGAGCT TCCACTAGGG AGAAGAGACT CGAGAACAGC GAGCCTCAAC GGCGCAAACA CGAACATCCC
TGCACCTAAC TCAACTATTC AGAACCTCTT AACCATGTTC CAACGCAAAG GTTTAAACGA AGAAGACCTT GTTTCCCTAT CAGGTAAGCT TAATAACATG TATTATTCTT GTTATACAAG
TTATCATGGA AACCTAACCG AGCCGAACTG AATAAACCTA ATTTTTTGTA GGAGGACATA CGATTGGAGT AGCGAGATGC ACAACATTCA AACAAAGACT ATACAACCAA AACGGTAATA
ACCAACCAGA CGAGACACTA GAAAGATCAT ACTACTATGG ACTAAGATCA ATTTGTCCAC CAACGGGAGG GGACAACAAC ATATCACCAC TAGACTTAGC CTCTCCTGCT AGATTCGACA
ACACATACTT CAAACTCCTT CTTTGGGGCA AAGGCTTATT GACATCAGAT GAAGTGCTTA TCACTGGTAA TGTAGACAAG ACTGTTGCAT TGGTTAAAGC TTATGCTGAA GATGAGAGCC
TTTTCTTCCG ACAGTTTGCA AAGTCTATGG TTAATATGGG GAATATACAG CCTCTTACTG GTTTTAATGG TGAGATTAGA AAGAGTTGTC ATGTGATTAA CTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGATG CATCAATCTT GTTGGATGAT AGTGCTACCA TACAAAGTGA AAAGAACGCA GGACCAAACA AGAACTCCAT TAGAGGGTTT CAAGTCATAG ATGAGATCAA AGCCAAACTG
GAACAAGCTT GTCCTCAAGT TGTCTCATGT GCAGACATTC TTGCTCTTGC TGCTCGTGGT TCAACTGTTC TGAGCGGTGG ACCATCATGG GAGCTTCCAC TAGGGAGAAG AGACTCGAGA
ACAGCGAGCC TCAACGGCGC AAACACGAAC ATCCCTGCAC CTAACTCAAC TATTCAGAAC CTCTTAACCA TGTTCCAACG CAAAGGTTTA AACGAAGAAG ACCTTGTTTC CCTATCAGGA
GGACATACGA TTGGAGTAGC GAGATGCACA ACATTCAAAC AAAGACTATA CAACCAAAAC GGTAATAACC AACCAGACGA GACACTAGAA AGATCATACT ACTATGGACT AAGATCAATT
TGTCCACCAA CGGGAGGGGA CAACAACATA TCACCACTAG ACTTAGCCTC TCCTGCTAGA TTCGACAACA CATACTTCAA ACTCCTTCTT TGGGGCAAAG GCTTATTGAC ATCAGATGAA
GTGCTTATCA CTGGTAATGT AGACAAGACT GTTGCATTGG TTAAAGCTTA TGCTGAAGAT GAGAGCCTTT TCTTCCGACA GTTTGCAAAG TCTATGGTTA ATATGGGGAA TATACAGCCT
CTTACTGGTT TTAATGGTGA GATTAGAAAG AGTTGTCATG TGATTAACTA A
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGATG CATCAATCTT GTTGGATGAT AGTGCTACCA TACAAAGTGA AAAGAACGCA GGACCAAACA AGAACTCCAT TAGAGGGTTT CAAGTCATAG ATGAGATCAA AGCCAAACTG
GAACAAGCTT GTCCTCAAGT TGTCTCATGT GCAGACATTC TTGCTCTTGC TGCTCGTGGT TCAACTGTTC TGAGCGGTGG ACCATCATGG GAGCTTCCAC TAGGGAGAAG AGACTCGAGA
ACAGCGAGCC TCAACGGCGC AAACACGAAC ATCCCTGCAC CTAACTCAAC TATTCAGAAC CTCTTAACCA TGTTCCAACG CAAAGGTTTA AACGAAGAAG ACCTTGTTTC CCTATCAGGA
GGACATACGA TTGGAGTAGC GAGATGCACA ACATTCAAAC AAAGACTATA CAACCAAAAC GGTAATAACC AACCAGACGA GACACTAGAA AGATCATACT ACTATGGACT AAGATCAATT
TGTCCACCAA CGGGAGGGGA CAACAACATA TCACCACTAG ACTTAGCCTC TCCTGCTAGA TTCGACAACA CATACTTCAA ACTCCTTCTT TGGGGCAAAG GCTTATTGAC ATCAGATGAA
GTGCTTATCA CTGGTAATGT AGACAAGACT GTTGCATTGG TTAAAGCTTA TGCTGAAGAT GAGAGCCTTT TCTTCCGACA GTTTGCAAAG TCTATGGTTA ATATGGGGAA TATACAGCCT
CTTACTGGTT TTAATGGTGA GATTAGAAAG AGTTGTCATG TGATTAACTA A
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Retrieve as FASTA
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