Entry information : BstrPrx[P]62-2 (Bostr.2983s0158)
Entry ID 14953
Creation 2018-03-02 (Christophe Dunand)
Last sequence changes 2018-03-02 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2018-03-07 (Christophe Dunand)
Peroxidase information: BstrPrx[P]62-2 (Bostr.2983s0158)
Name (synonym) BstrPrx[P]62-2 (Bostr.2983s0158)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Boechera
Organism Boechera stricta    [TaxId: 72658 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BstrPrx[P]62-2
start..stop
S start..stop
BstrPrx[P]62-1 254 1e-88 1..130 1..130
BstrPrx31 252 5e-86 1..130 1..128
AalpPrx62 241 2e-81 1..130 1..128
AhalPrx47 233 7e-81 1..130 1..128
Literature and cross-references BstrPrx[P]62-2 (Bostr.2983s0158)
Protein sequence: BstrPrx[P]62-2 (Bostr.2983s0158)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135 (111)
PWM (Da):   %s   14561.23 (11825.7)  
PI (pH):   %s   6.73 (5.56) Peptide Signal:   %s   cut: 25 range:25-135
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLVRSFCSI IVLLTNRCLI AVYGQGTRIG FYSTTCPNAE TIVRTTVRSH FGSDPKIAPG LLRMHFHDCF VQGCDGSVLL SGPNSERTAG ANFNLRGFEV IDDAKTQLDA ACPGVVSCAD 
IFTLAARDSV TEFYI* 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Two last exons are missing.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTGG TCCGATCATT TTGTTCGATC ATAGTCTTGC TTACAAATCG TTGTCTCATC GCGGTTTATG GCCAAGGTAC GAGGATCGGG TTCTATTCGA CCACGTGCCC CAATGCCGAG  ACGATTGTTC GGACCACCGT GAGATCTCAC TTTGGTTCAG ATCCAAAAAT TGCACCCGGG TTATTGAGAA TGCATTTCCA TGATTGCTTC GTTCAAGGTT GTGATGGTTC AGTGCTTTTA  TCGGGACCTA ACTCTGAAAG AACCGCTGGC GCTAACTTTA ACCTACGTGG TTTCGAGGTC ATTGACGATG CCAAGACGCA GCTAGATGCG GCATGTCCTG GTGTTGTCTC TTGTGCTGAT 
ATTTTTACCT TGGCGGCTCG TGATTCCGTA ACAGAATTTT ATATTTAG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTGG TCCGATCATT TTGTTCGATC ATAGTCTTGC TTACAAATCG TTGTCTCATC GCGGTTTATG GCCAAGGTAC GAGGATCGGG TTCTATTCGA CCACGTGCCC CAATGCCGAG  ACGATTGTTC GGACCACCGT GAGATCTCAC TTTGGTTCAG ATCCAAAAAT TGCACCCGGG TTATTGAGAA TGCATTTCCA TGATTGCTTC GTTCAAGGTT GTGATGGTTC AGTGCTTTTA  TCGGGACCTA ACTCTGAAAG AACCGCTGGC GCTAACTTTA ACCTACGTGG TTTCGAGGTC ATTGACGATG CCAAGACGCA GCTAGATGCG GCATGTCCTG GTGTTGTCTC TTGTGCTGAT 
ATTTTTACCT TGGCGGCTCG TGATTCCGTA ACAGAATTTT ATATTTAG 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTGG TCCGATCATT TTGTTCGATC ATAGTCTTGC TTACAAATCG TTGTCTCATC GCGGTTTATG GCCAAGGTAC GAGGATCGGG TTCTATTCGA CCACGTGCCC CAATGCCGAG  ACGATTGTTC GGACCACCGT GAGATCTCAC TTTGGTTCAG ATCCAAAAAT TGCACCCGGG TTATTGAGAA TGCATTTCCA TGATTGCTTC GTTCAAGGTT GTGATGGTTC AGTGCTTTTA  TCGGGACCTA ACTCTGAAAG AACCGCTGGC GCTAACTTTA ACCTACGTGG TTTCGAGGTC ATTGACGATG CCAAGACGCA GCTAGATGCG GCATGTCCTG GTGTTGTCTC TTGTGCTGAT 
ATTTTTACCT TGGCGGCTCG TGATTCCGTA ACAGAATTTT ATATTTAG 

Retrieve as FASTA