Entry information : BstrPrx[P]85 (Bostr.10089s0016)
Entry ID 15012
Creation 2018-03-02 (Christophe Dunand)
Last sequence changes 2018-03-02 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2018-03-06 (Christophe Dunand)
Peroxidase information: BstrPrx[P]85 (Bostr.10089s0016)
Name (synonym) BstrPrx[P]85 (Bostr.10089s0016)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Boechera
Organism Boechera stricta    [TaxId: 72658 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BstrPrx[P]85
start..stop
S start..stop
CrubPrx94 177 7e-57 1..100 227..329
CagraPrx65 177 7e-57 1..100 227..329
AtPrx42 177 8e-57 1..100 227..329
AlyPrx42 177 8e-57 1..100 227..329
Literature and cross-references BstrPrx[P]85 (Bostr.10089s0016)
Protein sequence: BstrPrx[P]85 (Bostr.10089s0016)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   103
PWM (Da):   %s   12162.23  
PI (pH):   %s   9.56
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MLHKCPDSIP DPEAVQYVRG TPMVLDNNYY HKILDNKDLL LVDHQLAHDK RTRPIVMKMA KDHAKFFKEF LRAIQILHEN NPLTRSKGEM RKQCNLANES WKM* 

Retrieve as FASTA  
Remarks Pseudogen from genomic. Only last exon has been found.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGAAGTTTTA ATGTTCTAGG AGCTCGGGTT TTGGTTGAAG TCTTCCTCTC TCTAGCTGTC TCCTTGGAAT TTTAGTGAGG ATCTCTTTTG ATCCTTGCAT CAAACTCGGA AGCTGGCCCC  GGCTACGTTG GGTTTTCCGA GTTTGTGCTT GAGGACTATA TCCGCAAGAT TAGCCATGGG GATTAGCTTG GATTGACGTT GGTCCTCCCT TCTCAATTTC CTCGGCCGTT TCAAGACCTC  CGAATGCGCC TCCAGTTCTC GTCGACTCCA TTTTCCTCCT TTAACTCCGC CTTCTCCTTT GAACCTGTCT TTGCCCTCTT GGCCGTGTTA CCCATTGTTC TCTTTGATTT CCCATTCCTT  TTGTTGTTGC TCTTGTTTAA GTTTCTTGTT AGATGTTTTA AGTTTGGATA TTGTAAGATT TGACTTTTTA ATAACACGTG TCCAGGATCT CACAGCGTGG GATGTGTGAA GCTGGTTCAC  CGTCTGTACC CTGAGGGTGG ACCCGTCCTT GAACCCGGAC CACGTCCCTC ACATGCTACA CAAGTGTCCA GACTCAATCC CTGACCCAGA GGCTGTCCAG TACGTGCGTG GCACACCCAT  GGTGCTAGAC AACAATTACT ACCATAAAAT CCTAGACAAC AAGGATTTGC TCCTTGTGGA CCATCAGCTC GCACACGACA AACGGACCAG ACCAATTGTT ATGAAGATGG CTAAGGACCA  CGCCAAGTTC TTCAAGGAGT TCCTTAGGGC GATCCAGATC TTGCACGAGA ACAACCCTTT GACTCGCTCT AAGGGAGAGA TGAGGAAGCA GTGTAATCTC GCAAACGAGA GCTGGAAAAT  GTGAGAGAGA CACAGGCTCT GGTGTGCTGG GGTTCTCTGC TTTTGATTGG TATCGAACCA AGATGAATAA AATAATCTAT TAAAAGTTAG ATCAAAGAAA GGGTGATGAT GATTAATGCA  TCATGGTGGT GACCACACCC TTCTTTTCTT TTGTGTTGTT GTTGTGGCCT TAATGCTTTA ATTATGATGT GAGTGGTATT TGAATTATTT AATCTTAATG TTGGCTCTTT GTTGATTTTG 
GGTTTGTATA TGTATGTAAA ATGATGTAGT ATATATATAT ATATGTATGC ATATTCGTTG ATGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTACACA AGTGTCCAGA CTCAATCCCT GACCCAGAGG CTGTCCAGTA CGTGCGTGGC ACACCCATGG TGCTAGACAA CAATTACTAC CATAAAATCC TAGACAACAA GGATTTGCTC  CTTGTGGACC ATCAGCTCGC ACACGACAAA CGGACCAGAC CAATTGTTAT GAAGATGGCT AAGGACCACG CCAAGTTCTT CAAGGAGTTC CTTAGGGCGA TCCAGATCTT GCACGAGAAC 
AACCCTTTGA CTCGCTCTAA GGGAGAGATG AGGAAGCAGT GTAATCTCGC AAACGAGAGC TGGAAAATGT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGAAGTTTTA ATGTTCTAGG AGCTCGGGTT TTGGTTGAAG TCTTCCTCTC TCTAGCTGTC TCCTTGGAAT TTTAGTGAGG ATCTCTTTTG ATCCTTGCAT CAAACTCGGA AGCTGGCCCC  GGCTACGTTG GGTTTTCCGA GTTTGTGCTT GAGGACTATA TCCGCAAGAT TAGCCATGGG GATTAGCTTG GATTGACGTT GGTCCTCCCT TCTCAATTTC CTCGGCCGTT TCAAGACCTC  CGAATGCGCC TCCAGTTCTC GTCGACTCCA TTTTCCTCCT TTAACTCCGC CTTCTCCTTT GAACCTGTCT TTGCCCTCTT GGCCGTGTTA CCCATTGTTC TCTTTGATTT CCCATTCCTT  TTGTTGTTGC TCTTGTTTAA GTTTCTTGTT AGATGTTTTA AGTTTGGATA TTGTAAGATT TGACTTTTTA ATAACACGTG TCCAGGATCT CACAGCGTGG GATGTGTGAA GCTGGTTCAC  CGTCTGTACC CTGAGGGTGG ACCCGTCCTT GAACCCGGAC CACGTCCCTC ACATGCTACA CAAGTGTCCA GACTCAATCC CTGACCCAGA GGCTGTCCAG TACGTGCGTG GCACACCCAT  GGTGCTAGAC AACAATTACT ACCATAAAAT CCTAGACAAC AAGGATTTGC TCCTTGTGGA CCATCAGCTC GCACACGACA AACGGACCAG ACCAATTGTT ATGAAGATGG CTAAGGACCA  CGCCAAGTTC TTCAAGGAGT TCCTTAGGGC GATCCAGATC TTGCACGAGA ACAACCCTTT GACTCGCTCT AAGGGAGAGA TGAGGAAGCA GTGTAATCTC GCAAACGAGA GCTGGAAAAT  GTGAGAGAGA CACAGGCTCT GGTGTGCTGG GGTTCTCTGC TTTTGATTGG TATCGAACCA AGATGAATAA AATAATCTAT TAAAAGTTAG ATCAAAGAAA GGGTGATGAT GATTAATGCA  TCATGGTGGT GACCACACCC TTCTTTTCTT TTGTGTTGTT GTTGTGGCCT TAATGCTTTA ATTATGATGT GAGTGGTATT TGAATTATTT AATCTTAATG TTGGCTCTTT GTTGATTTTG 
GGTTTGTATA TGTATGTAAA ATGATGTAGT ATATATATAT ATATGTATGC ATATTCGTTG ATGA 

Retrieve as FASTA