Entry information : CrubPrx104Carubv10005221m.g
Entry ID 15018
Creation 2018-03-08 (Christophe Dunand)
Last sequence changes 2018-03-08 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Peroxidase information: CrubPrx104Carubv10005221m.g
Name CrubPrx104Carubv10005221m.g
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Capsella
Organism Capsella rubella    [TaxId: 81985 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CrubPrx104
start..stop
S start..stop
AalpPrx09 639 0 1..330 1..331
AruPrx49-2 628 0 14..330 15..331
AruPrx49-1 628 0 14..330 15..331
AtPrx49 627 0 13..330 14..331
Literature and cross-references CrubPrx104Carubv10005221m.g
Protein sequence: CrubPrx104Carubv10005221m.g
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (309)
PWM (Da):   %s   36071.15 (33628.9)  
PI (pH):   %s   8.75 (8.91) Peptide Signal:   %s   cut: 22 range:22-330
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARLASFLLL SLLCFFPLCL CDKSYGGKLF PGYYSHSCPQ ASEIVRSVVA KAVARETRMA ASLLRLHFHD CFVQGCDGSL LLDSGGRIVS EKNSNPNSKS ARGFDVVDQI KAELERQCPG  IVSCADVLTL AARDSSVLTG GPSWVVPLGR RDSRSASLSG SNNNIPAPNN TFSTILSKFN RQGLDVTDLV ALSGSHTIGF SRCTSFRQRL YNQSGNGRPD MTLEQSFAAN LRQRCPRSGG 
DQILSVLDIV SAARFDNSYF KNLIENKGLL NSDQVLFSSN EKSRELVKKY AEDQGEFFEQ FAESMIKMGN ISPLTGSSGE IRKNCRKINS * 

Retrieve as FASTA  
Remarks
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTTACTCATC TTCTTACTGA AACTTGGAAA GTAATGGCAA GACTCGCAAG TTTTCTCCTT CTTTCTCTCC TTTGCTTTTT CCCTCTCTGC CTCTGCGACA AGAGCTATGG AGGAAAACTC  TTCCCGGGTT ATTACTCCCA TTCATGTCCA CAAGCCAGTG AGATCGTGAG ATCAGTTGTG GCTAAAGCTG TTGCTAGAGA GACCCGTATG GCTGCTTCCT TGCTGAGACT TCATTTCCAC  GACTGTTTCG TTCAGGTTTG GTTAACTTCT TCTACGTTTC ACCGTTTTTG TTTGTTTAAC TTTTTGAACA AGGTATCTTT GAAATCCAGG GTTGTGATGG CTCTTTGCTT TTAGACAGCG  GTGGGAGGAT AGTGAGTGAG AAAAACTCAA ACCCTAACAG CAAATCAGCT CGTGGTTTCG ACGTAGTTGA CCAAATCAAA GCTGAACTGG AGAGACAATG CCCTGGAATT GTTTCTTGCG  CTGATGTTCT TACCTTAGCC GCTAGAGACT CCTCTGTTCT TGTAAGCCTC TTCCAATATA GTCTCTATGG TCTCGAACTA AATATGAAAC ATCAGCTAAC TCGGTTTGGT TTTTTGGTGT  AGACTGGTGG ACCAAGCTGG GTGGTTCCAT TGGGAAGAAG AGATTCGCGA AGTGCAAGCT TGAGTGGTTC TAACAACAAC ATCCCTGCAC CAAACAACAC TTTCAGTACC ATTCTATCGA  AGTTTAACCG TCAAGGACTC GACGTTACTG ACCTTGTTGC TCTCTCCGGT AAGCTTTCGC CATTATACAC ACATAGAACA GAACTAAAAG TAACCGTATT ATCCCTTACT TGCTTCTCAA  GCCACCATAC TTCTTAAATG TTATCACAGG TAGTCACACC ATCGGATTCT CGAGATGCAC GAGCTTCAGA CAGAGGTTGT ACAACCAGTC CGGAAACGGT CGTCCAGACA TGACATTGGA  ACAATCTTTC GCTGCTAACT TACGCCAAAG GTGTCCAAGA TCCGGCGGGG ACCAAATTCT TTCGGTGTTG GACATTGTCA GCGCAGCGAG ATTTGACAAC AGCTATTTCA AGAACTTGAT  AGAGAACAAG GGTTTGTTGA ATTCAGACCA GGTTTTGTTC AGCAGTAACG AGAAATCAAG AGAGCTTGTA AAGAAGTATG CAGAGGATCA AGGAGAGTTT TTTGAGCAAT TTGCAGAATC  GATGATCAAG ATGGGAAATA TCTCTCCTCT AACGGGTTCC AGTGGTGAAA TCAGGAAAAA TTGCAGGAAG ATTAACTCTT GAGCTCCTGT TATAAGAGGA AACAAATAGA TACAAAAATA 
TATTCGGAAG AACTGTGTGA CACTTGCTTT TTTACTTTTG GGTTGTCTTT TTTT 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAGAC TCGCAAGTTT TCTCCTTCTT TCTCTCCTTT GCTTTTTCCC TCTCTGCCTC TGCGACAAGA GCTATGGAGG AAAACTCTTC CCGGGTTATT ACTCCCATTC ATGTCCACAA  GCCAGTGAGA TCGTGAGATC AGTTGTGGCT AAAGCTGTTG CTAGAGAGAC CCGTATGGCT GCTTCCTTGC TGAGACTTCA TTTCCACGAC TGTTTCGTTC AGGGTTGTGA TGGCTCTTTG  CTTTTAGACA GCGGTGGGAG GATAGTGAGT GAGAAAAACT CAAACCCTAA CAGCAAATCA GCTCGTGGTT TCGACGTAGT TGACCAAATC AAAGCTGAAC TGGAGAGACA ATGCCCTGGA  ATTGTTTCTT GCGCTGATGT TCTTACCTTA GCCGCTAGAG ACTCCTCTGT TCTTACTGGT GGACCAAGCT GGGTGGTTCC ATTGGGAAGA AGAGATTCGC GAAGTGCAAG CTTGAGTGGT  TCTAACAACA ACATCCCTGC ACCAAACAAC ACTTTCAGTA CCATTCTATC GAAGTTTAAC CGTCAAGGAC TCGACGTTAC TGACCTTGTT GCTCTCTCCG GTAGTCACAC CATCGGATTC  TCGAGATGCA CGAGCTTCAG ACAGAGGTTG TACAACCAGT CCGGAAACGG TCGTCCAGAC ATGACATTGG AACAATCTTT CGCTGCTAAC TTACGCCAAA GGTGTCCAAG ATCCGGCGGG  GACCAAATTC TTTCGGTGTT GGACATTGTC AGCGCAGCGA GATTTGACAA CAGCTATTTC AAGAACTTGA TAGAGAACAA GGGTTTGTTG AATTCAGACC AGGTTTTGTT CAGCAGTAAC  GAGAAATCAA GAGAGCTTGT AAAGAAGTAT GCAGAGGATC AAGGAGAGTT TTTTGAGCAA TTTGCAGAAT CGATGATCAA GATGGGAAAT ATCTCTCCTC TAACGGGTTC CAGTGGTGAA 
ATCAGGAAAA ATTGCAGGAA GATTAACTCT TGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTTACTCATC TTCTTACTGA AACTTGGAAA GTAATGGCAA GACTCGCAAG TTTTCTCCTT CTTTCTCTCC TTTGCTTTTT CCCTCTCTGC CTCTGCGACA AGAGCTATGG AGGAAAACTC  TTCCCGGGTT ATTACTCCCA TTCATGTCCA CAAGCCAGTG AGATCGTGAG ATCAGTTGTG GCTAAAGCTG TTGCTAGAGA GACCCGTATG GCTGCTTCCT TGCTGAGACT TCATTTCCAC  GACTGTTTCG TTCAGGGTTG TGATGGCTCT TTGCTTTTAG ACAGCGGTGG GAGGATAGTG AGTGAGAAAA ACTCAAACCC TAACAGCAAA TCAGCTCGTG GTTTCGACGT AGTTGACCAA  ATCAAAGCTG AACTGGAGAG ACAATGCCCT GGAATTGTTT CTTGCGCTGA TGTTCTTACC TTAGCCGCTA GAGACTCCTC TGTTCTTACT GGTGGACCAA GCTGGGTGGT TCCATTGGGA  AGAAGAGATT CGCGAAGTGC AAGCTTGAGT GGTTCTAACA ACAACATCCC TGCACCAAAC AACACTTTCA GTACCATTCT ATCGAAGTTT AACCGTCAAG GACTCGACGT TACTGACCTT  GTTGCTCTCT CCGGTAGTCA CACCATCGGA TTCTCGAGAT GCACGAGCTT CAGACAGAGG TTGTACAACC AGTCCGGAAA CGGTCGTCCA GACATGACAT TGGAACAATC TTTCGCTGCT  AACTTACGCC AAAGGTGTCC AAGATCCGGC GGGGACCAAA TTCTTTCGGT GTTGGACATT GTCAGCGCAG CGAGATTTGA CAACAGCTAT TTCAAGAACT TGATAGAGAA CAAGGGTTTG  TTGAATTCAG ACCAGGTTTT GTTCAGCAGT AACGAGAAAT CAAGAGAGCT TGTAAAGAAG TATGCAGAGG ATCAAGGAGA GTTTTTTGAG CAATTTGCAG AATCGATGAT CAAGATGGGA  AATATCTCTC CTCTAACGGG TTCCAGTGGT GAAATCAGGA AAAATTGCAG GAAGATTAAC TCTTGAGCTC CTGTTATAAG AGGAAACAAA TAGATACAAA AATATATTCG GAAGAACTGT 
GTGACACTTG CTTTTTTACT TTTGGGTTGT CTTTTTTT 

Retrieve as FASTA