Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
560 |
| PWM (Da): |
59455.67 |
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| PI (pH): |
8.35 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MMISVGVPKS VAALCTGGIA RGALSEQATS SFAWVQSGVV GKSFGWIVGK KLKRSPTHRA FATRLRAAAS SGVNGTIADL KDSEYDYDLV TIGAGSGGVR ASRFAANLGA KVAVCELPFS
TISSDSAGGV GGTCVLRGCV PKKILVYGSQ FAHSFEDSKG FGWSYDSKPK HDWNMLIDNK NKELNRLLGV YKNILKNANV ALIEGRGKIV DPHTVDISGK RIRARHILIA VGGRPSVPDI
PGKEFVITSD EALDLPSRPD KICIVGGGYI ALEFAGIFNG LGSEVHVFIR QDKVLRGFDE EIRDFVAEQM LLKGIKFHFG ESPTAVEKGS DGKFTLVTTE GSEVADSIMF ATGRKPNTKN
LGLEDVGVNI NSKGAIEVDE YSRTNVASIW AVGDATDRMN LTPVALMEGM AFAKTAFGDE PSKPDHRYVA SAVFTQPPIG TVGLTEAEAL DTYGDIDVYT SNFRPMKATI SGLGNRTFMK
IIVDAASNVV VGVHMCGEDA PEVLQGFGVA VKAGLTKPQF DATVGIHPTA AEELVTMRSP TRKLRQKSVK VAEEGAARAV
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Retrieve as FASTA
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| Remarks |
isotig14892 + isotig14894 (mismatches) isotig14893 (5') + isotig14895 (3') |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATGATAT CTGTCGGAGT GCCGAAATCT GTGGCCGCGC TCTGCACGGG AGGGATTGCT CGAGGAGCGT TGTCCGAGCA GGCGACGTCT TCCTTTGCTT GGGTTCAGTC AGGAGTTGTC
GGGAAGTCGT TCGGATGGAT CGTCGGTAAG AAGTTGAAAA GATCCCCAAC ACACAGAGCG TTTGCAACTC GTTTGCGAGC TGCAGCAAGT AGTGGCGTAA ATGGAACTAT CGCAGATTTG
AAAGACAGTG AGTATGATTA TGATCTCGTG ACCATCGGAG CGGGCAGCGG AGGAGTGAGG GCTTCACGAT TTGCTGCAAA CCTTGGTGCT AAGGTAGCAG TTTGTGAGCT TCCATTTTCC
ACAATCTCGT CTGACTCGGC CGGAGGTGTG GGTGGCACGT GTGTGCTCCG AGGGTGTGTA CCGAAGAAGA TACTGGTATA CGGATCTCAG TTTGCTCATA GTTTTGAAGA CAGCAAGGGC
TTTGGGTGGT CATACGATTC AAAACCAAAG CATGATTGGA ATATGCTGAT AGACAATAAG AACAAAGAGC TGAATCGTCT GCTTGGAGTT TACAAAAATA TATTGAAGAA CGCAAATGTC
GCTCTCATCG AGGGACGGGG CAAGATTGTT GATCCTCATA CAGTTGACAT CAGTGGCAAA AGGATTCGCG CACGGCATAT TTTGATCGCT GTAGGGGGAA GACCTTCTGT TCCGGACATT
CCAGGAAAAG AGTTTGTGAT TACCTCAGAC GAAGCTCTCG ATTTACCGTC TAGACCAGAT AAAATCTGTA TCGTTGGAGG TGGATACATT GCCTTGGAGT TCGCTGGTAT CTTTAATGGT
TTGGGAAGTG AGGTTCATGT CTTCATTCGG CAAGATAAAG TGCTGCGTGG CTTTGATGAA GAGATTAGGG ATTTCGTTGC GGAGCAGATG TTGTTGAAGG GTATAAAGTT TCACTTTGGA
GAGTCACCTA CGGCAGTAGA AAAAGGTTCT GATGGTAAAT TTACTTTGGT GACCACTGAA GGGTCTGAGG TTGCGGACTC GATAATGTTT GCAACCGGTC GGAAGCCAAA CACGAAGAAT
TTGGGCTTGG AGGACGTTGG TGTTAATATC AATTCGAAGG GTGCGATTGA GGTCGACGAG TATTCAAGGA CAAATGTCGC CTCTATATGG GCAGTAGGAG ATGCCACGGA CAGGATGAAT
CTTACTCCAG TAGCCCTCAT GGAGGGCATG GCTTTCGCTA AGACCGCATT TGGAGACGAA CCGAGTAAAC CAGATCATAG ATATGTGGCA TCTGCGGTTT TCACTCAGCC TCCTATTGGA
ACAGTTGGGC TCACGGAGGC AGAGGCCCTG GATACATATG GAGACATTGA TGTTTATACG TCCAACTTTC GACCTATGAA GGCCACTATA TCAGGGCTCG GTAATCGGAC CTTTATGAAG
ATAATCGTTG ACGCGGCCAG CAATGTCGTG GTTGGAGTTC ACATGTGCGG AGAAGATGCT CCAGAAGTCT TGCAGGGATT TGGTGTTGCG GTCAAGGCCG GCTTGACGAA ACCTCAGTTT
GATGCAACTG TTGGCATCCA CCCAACAGCA GCAGAAGAGC TGGTGACAAT GAGATCACCA ACGCGGAAAT TGCGACAAAA GTCTGTTAAG GTGGCGGAGG AAGGAGCCGC ACGGGCCGTA
TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTTGAGCAGA AGGGTGAGGA AGGAGACAGT CGTGTGATTC TCTCATCTCT CCTGTTGCTG TCCGATGTAC TGGTGAGAAT TTGAAATTGC TGATTAGCTC GTCACTCTCA GATTCTCCTT
TTCCAGAATT CGGAGGAGAT GATGATATCT GTCGGAGTGC CGAAATCTGT GGCCGCGCTC TGCACGGGAG GGATTGCTCG AGGAGCGTTG TCCGAGCAGG CGACGTCTTC CTTTGCTTGG
GTTCAGTCAG GAGTTGTCGG GAAGTCGTTC GGATGGATCG TCGGTAAGAA GTTGAAAAGA TCCCCAACAC ACAGAGCGTT TGCAACTCGT TTGCGAGCTG CAGCAAGTAG TGGCGTAAAT
GGAACTATCG CAGATTTGAA AGACAGTGAG TATGATTATG ATCTCGTGAC CATCGGAGCG GGCAGCGGAG GAGTGAGGGC TTCACGATTT GCTGCAAACC TTGGTGCTAA GGTAGCAGTT
TGTGAGCTTC CATTTTCCAC AATCTCGTCT GACTCGGCCG GAGGTGTGGG TGGCACGTGT GTGCTCCGAG GGTGTGTACC GAAGAAGATA CTGGTATACG GATCTCAGTT TGCTCATAGT
TTTGAAGACA GCAAGGGCTT TGGGTGGTCA TACGATTCAA AACCAAAGCA TGATTGGAAT ATGCTGATAG ACAATAAGAA CAAAGAGCTG AATCGTCTGC TTGGAGTTTA CAAAAATATA
TTGAAGAACG CAAATGTCGC TCTCATCGAG GGACGGGGCA AGATTGTTGA TCCTCATACA GTTGACATCA GTGGCAAAAG GATTCGCGCA CGGCATATTT TGATCGCTGT AGGGGGAAGA
CCTTCTGTTC CGGACATTCC AGGAAAAGAG TTTGTGATTA CCTCAGACGA AGCTCTCGAT TTACCGTCTA GACCAGATAA AATCTGTATC GTTGGAGGTG GATACATTGC CTTGGAGTTC
GCTGGTATCT TTAATGGTTT GGGAAGTGAG GTTCATGTCT TCATTCGGCA AGATAAAGTG CTGCGTGGCT TTGATGAAGA GATTAGGGAT TTCGTTGCGG AGCAGATGTT GTTGAAGGGT
ATAAAGTTTC ACTTTGGAGA GTCACCTACG GCAGTAGAAA AAGGTTCTGA TGGTAAATTT ACTTTGGTGA CCACTGAAGG GTCTGAGGTT GCGGACTCGA TAATGTTTGC AACCGGTCGG
AAGCCAAACA CGAAGAATTT GGGCTTGGAG GACGTTGGTG TTAATATCAA TTCGAAGGGT GCGATTGAGG TCGACGAGTA TTCAAGGACA AATGTCGCCT CTATATGGGC AGTAGGAGAT
GCCACGGACA GGATGAATCT TACTCCAGTA GCCCTCATGG AGGGCATGGC TTTCGCTAAG ACCGCATTTG GAGACGAACC GAGTAAACCA GATCATAGAT ATGTGGCATC TGCGGTTTTC
ACTCAGCCTC CTATTGGAAC AGTTGGGCTC ACGGAGGCAG AGGCCCTGGA TACATATGGA GACATTGATG TTTATACGTC CAACTTTCGA CCTATGAAGG CCACTATATC AGGGCTCGGT
AATCGGACCT TTATGAAGAT AATCGTTGAC GCGGCCAGCA ATGTCGTGGT TGGAGTTCAC ATGTGCGGAG AAGATGCTCC AGAAGTCTTG CAGGGATTTG GTGTTGCGGT CAAGGCCGGC
TTGACGAAAC CTCAGTTTGA TGCAACTGTT GGCATCCACC CAACAGCAGC AGAAGAGCTG GTGACAATGA GATCACCAAC GCGGAAATTG CGACAAAAGT CTGTTAAGGT GGCGGAGGAA
GGAGCCGCAC GGGCCGTATA GAGAGTCAGT TTTATTTCTC CAACGTAAAA CTGGTTTTGA GTATGGGGAA CTTTCTCAGT AATCTATGTT GGGAGGAGGG AAGGTGATAA ATACTGACTT
ACAAAATTCC AAACAACACA AATAGGAAAG AAACTTAGTC CACACGTAGT CGACATTGCT CTATGATCAG GTGAACTGAC ATAGTACATG TAATTTAACT GACATAGCAC ATACCACGCC
AGTGTACTAC ATTATTGACC TCCAAAGGGG GTAGCGAAAA TCATTCAAAT TGCAAAGAGT GGCTAGTCTG GGGCGGAACG TACTCGGTGC TCAAAATTCT GGAGTGGGTC ACGATACCTG
GACCTTGAAG
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Retrieve as FASTA
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