Entry information : MpalMSD01
Entry ID 15168
Creation 2018-04-24 (Christophe Dunand)
Last sequence changes 2018-04-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-04-24 (Christophe Dunand)
Peroxidase information: MpalMSD01
Name MpalMSD01
Class Mn SOD    [Orthogroup: MSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia paleacea    [TaxId: 56867 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpalMSD01
start..stop
S start..stop
MpMSD01 462 3e-168 1..230 1..237
PpaMSD01 324 7e-114 14..228 15..226
AtMSD01 316 1e-110 1..228 6..228
ThasMSD01 312 2e-109 7..230 13..232
Literature and cross-references MpalMSD01
Protein sequence: MpalMSD01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   230
PWM (Da):   %s   25210.95  
PI (pH):   %s   7.98
Sequence
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Send to Peroxiscan
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MAAMQASMAL KRGTSNLLGL QRGFSTSYKE HGYTLPDLPY GYGELEPAIS GDIMQLHHSK HHQAYITGFN QALEKLDAAH SNRDPQTIVQ LQAALKFNGG GHVNHSIFWK NLAPIKEGGG 
VPPEGSLASA IEAEFGSLET LKAKMVAGGV GVQGSGWVWL GLNKDLKKLV VETTANQDPL VTKGLIPLLG IDVWEHAYYL QYKNVRPDYL KNIWKVVNWK DVSSRYEENV 

Retrieve as FASTA  
Remarks isotig17978
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGCAA TGCAGGCGTC GATGGCTCTC AAACGAGGCA CCTCGAACTT GTTGGGTTTG CAGAGAGGGT TTAGTACATC GTACAAGGAA CACGGTTACA CTCTACCAGA TCTGCCTTAT  GGGTATGGGG AGTTAGAGCC TGCAATCAGT GGAGACATCA TGCAATTGCA CCACTCAAAG CATCACCAGG CTTACATCAC CGGCTTCAAT CAGGCGCTCG AAAAGCTTGA CGCAGCTCAT  TCTAATCGCG ATCCACAAAC CATTGTCCAG CTCCAGGCTG CTCTTAAGTT CAACGGTGGA GGCCATGTTA ACCACAGCAT CTTTTGGAAG AATCTAGCAC CAATAAAGGA AGGAGGAGGT  GTTCCTCCTG AAGGATCGTT GGCATCTGCT ATTGAGGCTG AGTTTGGTTC TCTCGAAACT CTGAAAGCGA AGATGGTTGC TGGAGGTGTA GGAGTTCAAG GATCAGGCTG GGTGTGGCTG  GGTCTAAACA AAGACCTAAA AAAGCTCGTT GTGGAGACCA CAGCAAATCA GGATCCTTTG GTTACCAAAG GACTGATTCC ACTGTTGGGG ATCGATGTTT GGGAACATGC TTACTACCTA 
CAGTACAAAA ATGTTCGCCC TGACTACTTG AAAAATATCT GGAAAGTGGT GAACTGGAAG GATGTCTCAT CTCGATACGA AGAAAATGTT TGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAAAAAAAAA AAAAAGTACT CTGCGTTGAT ACCACTGCTT AAGCAGTGGT ATCAACGCAG AGTACGGGGG GCCGCTGTCT CCAAGAAGCG AGATTCTCCT GAGCACGCAC TTGTGGCGAC  AAACAACATC GATCAATCGA GAGCTGGATG GGAGTTTAGA GAGGCAGTAG GGAGGAAGGT CGAGTGAGTG TTGAGCAGAC ACGCGATTGA AAGTAAGGCT TGACGGGAGT GAGAAGCCAT  GGCGGCAATG CAGGCGTCGA TGGCTCTCAA ACGAGGCACC TCGAACTTGT TGGGTTTGCA GAGAGGGTTT AGTACATCGT ACAAGGAACA CGGTTACACT CTACCAGATC TGCCTTATGG  GTATGGGGAG TTAGAGCCTG CAATCAGTGG AGACATCATG CAATTGCACC ACTCAAAGCA TCACCAGGCT TACATCACCG GCTTCAATCA GGCGCTCGAA AAGCTTGACG CAGCTCATTC  TAATCGCGAT CCACAAACCA TTGTCCAGCT CCAGGCTGCT CTTAAGTTCA ACGGTGGAGG CCATGTTAAC CACAGCATCT TTTGGAAGAA TCTAGCACCA ATAAAGGAAG GAGGAGGTGT  TCCTCCTGAA GGATCGTTGG CATCTGCTAT TGAGGCTGAG TTTGGTTCTC TCGAAACTCT GAAAGCGAAG ATGGTTGCTG GAGGTGTAGG AGTTCAAGGA TCAGGCTGGG TGTGGCTGGG  TCTAAACAAA GACCTAAAAA AGCTCGTTGT GGAGACCACA GCAAATCAGG ATCCTTTGGT TACCAAAGGA CTGATTCCAC TGTTGGGGAT CGATGTTTGG GAACATGCTT ACTACCTACA  GTACAAAAAT GTTCGCCCTG ACTACTTGAA AAATATCTGG AAAGTGGTGA ACTGGAAGGA TGTCTCATCT CGATACGAAG AAAATGTTTG ATTTAGATCG TTGAGGGTAA GTCGCCATGT  CATATATGTC CACCCTTGTC CGTTCATGAC TTTTCAGTGA GGCATGGAGG GCAATGTTTG TGAAACTTAA GGGCTCAAGA GAGATTTTGG ATGGCCTAGT CCATTCATCT TAACATGTAT  ATAGCGGGAG TATTCTTCAA GATTATTTTG GCAGAAGATC CTTGCATTGT GTTAATTTAT CGAGTTCAAT AGAGTATTTT TTCCCATATC TGTATGGGAA GCATAAGACT TGAGATCGAA  AGTTCATTTC ATAATTTTTT CCTTTTGTCG GTTTGAATTG CTGGTCGAGG CGGATTGAAT TGCTGTTGGA GTACTACATC TCTCCGTCCA AATGCACGTG GATTGATGTT TATTCCCCTT  GATCAAAGTG GAGCGTTTTC TGGCTTTGTG AAAGAGTTTT TTGGGACACA AGTAAGTTTG TATCGAAAGC TGGTCGAGAT TGCCTACAGT TGAAAAGATA CGAAATAGAC AAAAGATACG 
AAACACCCGT CTGAAAGAAA TTTATAGATG GGTGTTGCTG GAAATGTTTC ATATACCACC GAAAATGAGA TGCGAGTTTT TCCATGT 

Retrieve as FASTA