Entry information : MpalFSD
Entry ID 15172
Creation 2018-04-24 (Christophe Dunand)
Last sequence changes 2018-04-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-04-24 (Christophe Dunand)
Peroxidase information: MpalFSD
Name MpalFSD
Class FeSOD    [Orthogroup: FSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia paleacea    [TaxId: 56867 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpalFSD
start..stop
S start..stop
MpFSD01 484 6e-176 1..253 34..286
PpaFSD01 306 9e-106 2..253 29..279
LeFSD03 305 1e-105 41..242 46..249
CbraFSD01 306 1e-105 37..247 59..294
Literature and cross-references MpalFSD
Protein sequence: MpalFSD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   254
PWM (Da):   %s   28116.25  
PI (pH):   %s   7.16
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAMAAVTGAR CLLPVPSLRS SKARPSNANF LKLKLPLGAP VAKFDLKDPP YPLDALEPHM SKETLEFHWG KHHRAYVNNL NGQIENSDLE RNTLEEIVQS SYNNGNPTPA FNNAGQIWNH  DFFWQSMKPG GGGPPTGEVA ELINRDFGSY DNFVKEFKAA GATQFGSGWA WLVLKNGKLA IEKTPNAVTP ILWGSIPLLV VDVWEHAYYL DFQNRRPDYL STFVNDLISW DAVNERLARA 
KASVNLSTPS IPES 

Retrieve as FASTA  
Remarks No RNA seq. Only DNA. First exon are missin (
MPRAHLIPTPHPFSQRxxxxxxxxxxxSERAA found base on homology with Mpol)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAATGG CAGCAGTTAC TGGGGCTCGT TGCCTCCTGC CTGTTCCTTC GCTTCGGTCT TCCAAGGCCC GACCCTCTAA TGCCAACTTT TTGAAGTTGA AGCTTCCGCT TGGTGCTCCC  GTTGCCAAGT TTGACCTGAA GGACCCACCT TACCCTCTGG ATGCTTTGGA GCCGCACATG AGCAAGGAGA CCCTTGAATT TCACTGGGGA AAGCACCACC GAGCTTACGT CAACAACTTG  AACGGACAGA TCGAGAACTC TGACTTGGAG AGAAACACCC TTGAGGAGAT TGTTCAGAGT TCTTACAACA ATGGCAACCC TACCCCAGCT TTCAACAACG CTGGGCAGAT TTGGAACCAC  GACTTTTTCT GGCAGTCAAT GAAGCCAGGA GGAGGTGGCC CGCCCACCGG TGAGGTCGCA GAGCTCATCA ACAGAGACTT CGGAAGCTAC GATAACTTCG TCAAGGAATT CAAGGCTGCA  GGAGCCACCC AATTCGGTTC TGGATGGGCG TGGCTTGTCT TGAAGAATGG CAAGCTCGCC ATCGAAAAGA CTCCAAATGC AGTTACCCCT ATCCTCTGGG GCAGCATTCC CCTTCTTGTT  GTGGACGTCT GGGAGCACGC ATACTACCTC GACTTCCAGA ACCGAAGGCC AGATTACCTC AGCACCTTTG TGAACGATCT GATCAGCTGG GATGCAGTCA ACGAACGTCT TGCCCGAGCT 
AAGGCTAGCG TAAATCTCAG CACACCTTCC ATCCCTGAAT CGTAA 

Retrieve as FASTA