Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
290 (396) |
| PWM (Da): |
31422.17 (41756.8) |
Transmb domain: |
o261-283i (o261-283i) |
| PI (pH):
| 6.79 (4.63) |
Peptide Signal:
| cut: 20 range:20-415 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAPVVYAAYL KSIDKARRDL RALIAEKNCA PIMLRLAWHD AGTYDAKTKT GGANGSIRNE EELNHSANNG LKIALALCEP IKAKYPNITY ADLYQLAGVV AVEVTGGPTI EFVPGRKDSL
ASPREGRLPD AKKGPQHLRD IFYRMGLSDK DIVALSGAHT LGKAHPERSG FDGAWTEQPL KFDNSYFVEL LKGESEGLLQ LPTDKCLVED PSFRPYVDLY AKDEDAFFKD YAESHKKLSE
LGFRDPSSLP SGSGSEVSTS TVLAQGAVGV VVAAAVVIFG YLYEAKRKSK
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (incorrect prediction, large 5'part is missing) and EST |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCCAG TGGTGTACGC CGCGTATCTC AAGTCCATTG ACAAGGCACG CCGAGACCTG CGGGCTCTCA TTGCTGAAAA GAATTGCGCG CCCATCATGC TTCGTCTCGC ATGGCATGAT
GCAGGCACTT ATGATGCAAA AACGAAGACG GGTGGGGCAA ATGGTTCCAT TAGAAACGAG GAGGAACTCA ATCACAGTGC AAATAATGGG CTGAAAATTG CACTTGCATT GTGTGAACCA
ATCAAGGCAA AGTACCCAAA TATTACTTAT GCAGACCTTT ATCAGCTGGC TGGTGTAGTT GCTGTTGAGG TTACAGGAGG TCCCACAATT GAGTTTGTCC CTGGTCGTAA GGATTCACTG
GCATCACCAC GAGAAGGGCG GCTTCCTGAT GCGAAGAAAG GTCCACAACA CCTAAGGGAT ATCTTTTATA GGATGGGCCT ATCTGACAAG GATATTGTTG CTCTTTCTGG AGCGCACACA
TTGGGAAAAG CACATCCAGA AAGGTCAGGC TTTGATGGAG CATGGACTGA GCAGCCTCTG AAGTTTGATA ATTCATATTT TGTAGAGCTT CTCAAAGGCG AGTCTGAAGG ATTACTCCAA
TTGCCTACGG ACAAATGCTT GGTAGAGGAT CCCAGTTTCC GCCCTTATGT GGATCTTTAT GCAAAGGATG AAGATGCGTT TTTCAAGGAC TATGCAGAGT CACACAAGAA GCTTTCTGAA
TTGGGATTCA GAGATCCAAG CTCACTTCCC TCTGGTTCTG GTTCTGAAGT GAGCACATCT ACAGTGCTTG CACAAGGGGC AGTTGGAGTA GTAGTTGCTG CTGCAGTTGT TATTTTTGGC
TACTTATACG AGGCTAAAAG GAAATCAAAG TGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATGGCTCCA GTGGTGTACG CCGCGTATCT CAAGTCCATT GACAAGGCAC GCCGAGACCT GCGGGCTCTC ATTGCTGAAA AGAATTGCGC GCCCATCATG CTTCGTCTCG CATGGCATGA
TGCAGGCACT TATGATGCAA AAACGAAGAC GGGTGGGGCA AATGGTTCCA TTAGAAACGA GGAGGAACTC AATCACAGTG CAAATAATGG GCTGAAAATT GCACTTGCAT TGTGTGAACC
AATCAAGGCA AAGTACCCAA ATATTACTTA TGCAGACCTT TATCAGCTGG CTGGTGTAGT TGCTGTTGAG GTTACAGGAG GTCCCACAAT TGAGTTTGTC CCTGGTCGTA AGGATTCACT
GGCATCACCA CGAGAAGGGC GGCTTCCTGA TGCGAAGAAA GGTCCACAAC ACCTAAGGGA TATCTTTTAT AGGATGGGCC TATCTGACAA GGATATTGTT GCTCTTTCTG GAGCGCACAC
ATTGGGAAAA GCACATCCAG AAAGGTCAGG CTTTGATGGA GCATGGACTG AGCAGCCTCT GAAGTTTGAT AATTCATATT TTGTAGAGCT TCTCAAAGGC GAGTCTGAAG GATTACTCCA
ATTGCCTACG GACAAATGCT TGGTAGAGGA TCCCAGTTTC CGCCCTTATG TGGATCTTTA TGCAAAGGAT GAAGATGCGT TTTTCAAGGA CTATGCAGAG TCACACAAGA AGCTTTCTGA
ATTGGGATTC AGAGATCCAA GCTCACTTCC CTCTGGTTCT GGTTCTGAAG TGAGCACATC TACAGTGCTT GCACAAGGGG CAGTTGGAGT AGTAGTTGCT GCTGCAGTTG TTATTTTTGG
CTACTTATAC GAGGCTAAAA GGAAATCAAA GTGAGTGTGC TGCACGGGAA ATTCAGATGT TGGATACTGC AATTATATTT AGCATAAATA TTCTGAATTG AATGTTCTAT TTTCTTTTGA
GTAGGCACTG ACAGAT
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Retrieve as FASTA
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