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Entry information : PtaAPx05(PTA00004858)
Entry ID 15173
Creation 2018-04-25 (Christophe Dunand)
Last sequence changes 2018-04-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-04 (Christophe Dunand)
Peroxidase information: PtaAPx05(PTA00004858)
Name PtaAPx05(PTA00004858)
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Sheaths
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaAPx05
start..stop		 S start..stop
GbAPx03 503 0 1..290 3..292
CmichAPx09 495 2e-179 2..290 3..291
GmonAPx04 476 4.62e-172 1..290 1..290
WmAPx01 466 2.87e-168 1..290 1..290
Literature and cross-references PtaAPx05(PTA00004858)
EST ref. GenBank:   CF475522.1 [5' end]  DR095055.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.654
Protein sequence: PtaAPx05(PTA00004858)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290
PWM (Da):   %s   31422.17 Transmb domain:   %s   o261-283i
PI (pH):   %s   6.79
Sequence
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Send to Peroxiscan
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MAPVVYAAYL KSIDKARRDL RALIAEKNCA PIMLRLAWHD AGTYDAKTKT GGANGSIRNE EELNHSANNG LKIALALCEP IKAKYPNITY ADLYQLAGVV AVEVTGGPTI EFVPGRKDSL  ASPREGRLPD AKKGPQHLRD IFYRMGLSDK DIVALSGAHT LGKAHPERSG FDGAWTEQPL KFDNSYFVEL LKGESEGLLQ LPTDKCLVED PSFRPYVDLY AKDEDAFFKD YAESHKKLSE 
LGFRDPSSLP SGSGSEVSTS TVLAQGAVGV VVAAAVVIFG YLYEAKRKSK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, large 5'part is missing) and EST
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCAG TGGTGTACGC CGCGTATCTC AAGTCCATTG ACAAGGCACG CCGAGACCTG CGGGCTCTCA TTGCTGAAAA GAATTGCGCG CCCATCATGC TTCGTCTCGC ATGGCATGAT  GCAGGCACTT ATGATGCAAA AACGAAGACG GGTGGGGCAA ATGGTTCCAT TAGAAACGAG GAGGAACTCA ATCACAGTGC AAATAATGGG CTGAAAATTG CACTTGCATT GTGTGAACCA  ATCAAGGCAA AGTACCCAAA TATTACTTAT GCAGACCTTT ATCAGCTGGC TGGTGTAGTT GCTGTTGAGG TTACAGGAGG TCCCACAATT GAGTTTGTCC CTGGTCGTAA GGATTCACTG  GCATCACCAC GAGAAGGGCG GCTTCCTGAT GCGAAGAAAG GTCCACAACA CCTAAGGGAT ATCTTTTATA GGATGGGCCT ATCTGACAAG GATATTGTTG CTCTTTCTGG AGCGCACACA  TTGGGAAAAG CACATCCAGA AAGGTCAGGC TTTGATGGAG CATGGACTGA GCAGCCTCTG AAGTTTGATA ATTCATATTT TGTAGAGCTT CTCAAAGGCG AGTCTGAAGG ATTACTCCAA  TTGCCTACGG ACAAATGCTT GGTAGAGGAT CCCAGTTTCC GCCCTTATGT GGATCTTTAT GCAAAGGATG AAGATGCGTT TTTCAAGGAC TATGCAGAGT CACACAAGAA GCTTTCTGAA  TTGGGATTCA GAGATCCAAG CTCACTTCCC TCTGGTTCTG GTTCTGAAGT GAGCACATCT ACAGTGCTTG CACAAGGGGC AGTTGGAGTA GTAGTTGCTG CTGCAGTTGT TATTTTTGGC 
TACTTATACG AGGCTAAAAG GAAATCAAAG TGA 

Retrieve as FASTA  
cDNA►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGGCTCCA GTGGTGTACG CCGCGTATCT CAAGTCCATT GACAAGGCAC GCCGAGACCT GCGGGCTCTC ATTGCTGAAA AGAATTGCGC GCCCATCATG CTTCGTCTCG CATGGCATGA  TGCAGGCACT TATGATGCAA AAACGAAGAC GGGTGGGGCA AATGGTTCCA TTAGAAACGA GGAGGAACTC AATCACAGTG CAAATAATGG GCTGAAAATT GCACTTGCAT TGTGTGAACC  AATCAAGGCA AAGTACCCAA ATATTACTTA TGCAGACCTT TATCAGCTGG CTGGTGTAGT TGCTGTTGAG GTTACAGGAG GTCCCACAAT TGAGTTTGTC CCTGGTCGTA AGGATTCACT  GGCATCACCA CGAGAAGGGC GGCTTCCTGA TGCGAAGAAA GGTCCACAAC ACCTAAGGGA TATCTTTTAT AGGATGGGCC TATCTGACAA GGATATTGTT GCTCTTTCTG GAGCGCACAC  ATTGGGAAAA GCACATCCAG AAAGGTCAGG CTTTGATGGA GCATGGACTG AGCAGCCTCT GAAGTTTGAT AATTCATATT TTGTAGAGCT TCTCAAAGGC GAGTCTGAAG GATTACTCCA  ATTGCCTACG GACAAATGCT TGGTAGAGGA TCCCAGTTTC CGCCCTTATG TGGATCTTTA TGCAAAGGAT GAAGATGCGT TTTTCAAGGA CTATGCAGAG TCACACAAGA AGCTTTCTGA  ATTGGGATTC AGAGATCCAA GCTCACTTCC CTCTGGTTCT GGTTCTGAAG TGAGCACATC TACAGTGCTT GCACAAGGGG CAGTTGGAGT AGTAGTTGCT GCTGCAGTTG TTATTTTTGG  CTACTTATAC GAGGCTAAAA GGAAATCAAA GTGAGTGTGC TGCACGGGAA ATTCAGATGT TGGATACTGC AATTATATTT AGCATAAATA TTCTGAATTG AATGTTCTAT TTTCTTTTGA 
GTAGGCACTG ACAGAT 

Retrieve as FASTA